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MS007972 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007972
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAutophagy-related protein 3
Genome locationscaffold754:71582..71782
RNA-Seq ExpressionMS007972
SyntenyMS007972
Gene Ontology termsGO:0019787 - ubiquitin-like protein transferase activity (molecular function)
InterPro domainsIPR009069 - Cysteine alpha-hairpin motif superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8077725.1 hypothetical protein FH972_016259 [Carpinus fangiana]7.2e-1364.62Show/hide
Query:  MDGKPEKSRAVTKNLSACDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNSSLQSGRDLQT
        MD + E S +  K +S CDVEAL+KCL+ENNGD +KC+SQI+AFKSSCSLKKPNSS +S   L+T
Subjt:  MDGKPEKSRAVTKNLSACDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNSSLQSGRDLQT

KAE8077726.1 hypothetical protein FH972_016259 [Carpinus fangiana]7.2e-1364.62Show/hide
Query:  MDGKPEKSRAVTKNLSACDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNSSLQSGRDLQT
        MD + E S +  K +S CDVEAL+KCL+ENNGD +KC+SQI+AFKSSCSLKKPNSS +S   L+T
Subjt:  MDGKPEKSRAVTKNLSACDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNSSLQSGRDLQT

KAE8650146.1 hypothetical protein Csa_010997, partial [Cucumis sativus]2.6e-1882.26Show/hide
Query:  MDGKPEKSRAVTKNLSACDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNSSLQSGRD
        MDG  EKSRAVTKN S CDVEAL+KCLQENNGDR+KCESQIQAF  SCSLKK N SLQSGR+
Subjt:  MDGKPEKSRAVTKNLSACDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNSSLQSGRD

KAF3954648.1 hypothetical protein CMV_020027 [Castanea mollissima]1.6e-1261.19Show/hide
Query:  MDGKPEKSRAVTKNLSACDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNSSLQSGRDLQTGV
        MD K E S  V K +S CDVEAL+KCL+EN GD +KC+SQI+AFKSSCS+KKPN S +S   L +G+
Subjt:  MDGKPEKSRAVTKNLSACDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNSSLQSGRDLQTGV

KAG2700530.1 hypothetical protein I3760_06G001700 [Carya illinoinensis]1.9e-1365.67Show/hide
Query:  MDGKPEKSRAVTKNLSACDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNSSLQSGRDLQTGV
        MD K E S A+ K  S CDVEAL+KCL+EN+GD +KC+SQI+AFKSSCSLKKPN+S +S   L+TGV
Subjt:  MDGKPEKSRAVTKNLSACDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNSSLQSGRDLQTGV

TrEMBL top hitse value%identityAlignment
A0A0A0L2G8 Uncharacterized protein1.1e-1980.88Show/hide
Query:  MDGKPEKSRAVTKNLSACDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNSSLQSGR-DLQTGV
        MDG  EKSRAVTKN S CDVEAL+KCLQENNGDR+KCESQIQAF  SCSLKK N SLQSGR D  TGV
Subjt:  MDGKPEKSRAVTKNLSACDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNSSLQSGR-DLQTGV

A0A2K3PNC0 Uncharacterized protein7.8e-1361.19Show/hide
Query:  MDGKPEKSRAVTKNLSACDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNSSLQSGRDLQTGV
        M    E S  V K  SACDVEAL+KCL+EN GD +KC+SQI+AFKSSCS+KKPNSS+ S    + GV
Subjt:  MDGKPEKSRAVTKNLSACDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNSSLQSGRDLQTGV

A0A5N6RFC3 Uncharacterized protein3.5e-1364.62Show/hide
Query:  MDGKPEKSRAVTKNLSACDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNSSLQSGRDLQT
        MD + E S +  K +S CDVEAL+KCL+ENNGD +KC+SQI+AFKSSCSLKKPNSS +S   L+T
Subjt:  MDGKPEKSRAVTKNLSACDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNSSLQSGRDLQT

A0A5N6RHF1 Uncharacterized protein3.5e-1364.62Show/hide
Query:  MDGKPEKSRAVTKNLSACDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNSSLQSGRDLQT
        MD + E S +  K +S CDVEAL+KCL+ENNGD +KC+SQI+AFKSSCSLKKPNSS +S   L+T
Subjt:  MDGKPEKSRAVTKNLSACDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNSSLQSGRDLQT

G7IES9 Uncharacterized protein1.0e-1263.08Show/hide
Query:  MDGKPEKSRAVTKNLSACDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNSSLQSGRDLQT
        M  K EKS  V K  SACDV+AL+KCL+EN G+ +KC+SQI+AFKSSCS+KKPN SL S   L+T
Subjt:  MDGKPEKSRAVTKNLSACDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNSSLQSGRDLQT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGTAAACCGGAAAAATCTAGGGCTGTGACGAAGAATCTATCGGCATGCGATGTTGAAGCTCTCAGGAAATGCTTGCAGGAAAACAACGGCGATCGTATAAAGTG
CGAGTCTCAAATACAGGCCTTCAAGTCTTCTTGCTCCCTGAAGAAACCAAACTCATCTCTGCAATCTGGAAGGGACCTCCAGACTGGTGTT
mRNA sequenceShow/hide mRNA sequence
ATGGATGGTAAACCGGAAAAATCTAGGGCTGTGACGAAGAATCTATCGGCATGCGATGTTGAAGCTCTCAGGAAATGCTTGCAGGAAAACAACGGCGATCGTATAAAGTG
CGAGTCTCAAATACAGGCCTTCAAGTCTTCTTGCTCCCTGAAGAAACCAAACTCATCTCTGCAATCTGGAAGGGACCTCCAGACTGGTGTT
Protein sequenceShow/hide protein sequence
MDGKPEKSRAVTKNLSACDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNSSLQSGRDLQTGV