CuGenDBv2

Gene ID	MS008023
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Cytochrome c oxidase subunit 1
Genome location	scaffold284:219646..219997
RNA-Seq Expression	MS008023
Synteny	MS008023
Gene Ontology terms	GO:0006119 - oxidative phosphorylation (biological process) GO:0022900 - electron transport chain (biological process) GO:1902600 - proton transmembrane transport (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0045277 - respiratory chain complex IV (cellular component) GO:0004129 - cytochrome-c oxidase activity (molecular function) GO:0020037 - heme binding (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR000883 - Cytochrome c oxidase subunit I IPR023616 - Cytochrome c oxidase-like, subunit I domain IPR036927 - Cytochrome c oxidase-like, subunit I superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

AAF77684.1 cytochrome oxidase subunit 1, partial [Sarcandra grandifolia]

3.3e-45

82.76

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Query:  MLFTVGSIFLFTIGGLTRIVPANLGIDIALCDTYYVVAHFHYVLPMPFLLYLQDVETNHYWVGKIFCRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG
        MLF VGSIFLFTIGGLT IVPAN G+DIAL DTYY VAHFHYVL M  +L L      HYWVGKIF RTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG
Subjt:  MLFTVGSIFLFTIGGLTRIVPANLGIDIALCDTYYVVAHFHYVLPMPFLLYLQDVETNHYWVGKIFCRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG

Query:  MPRRIPDYPYAYARWN
        MPRRIPDYP AYA WN
Subjt:  MPRRIPDYPYAYARWN

ABY66627.1 cytochrome oxidase subunit I, partial [Echinocystis lobata]

3.3e-45

82.76

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Query:  MLFTVGSIFLFTIGGLTRIVPANLGIDIALCDTYYVVAHFHYVLPMPFLLYLQDVETNHYWVGKIFCRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG
        MLF VGSIFLFTIGGLT IVPAN G+DIAL DTYYVVAHFHYVL M  +  L      HYWVGKIF RTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG
Subjt:  MLFTVGSIFLFTIGGLTRIVPANLGIDIALCDTYYVVAHFHYVLPMPFLLYLQDVETNHYWVGKIFCRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG

Query:  MPRRIPDYPYAYARWN
        MPRRIPDYP AYA WN
Subjt:  MPRRIPDYPYAYARWN

ABY83868.1 cytochrome oxidase subunit 1, partial [Citrullus lanatus subsp. vulgaris]

3.3e-45

82.76

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Query:  MLFTVGSIFLFTIGGLTRIVPANLGIDIALCDTYYVVAHFHYVLPMPFLLYLQDVETNHYWVGKIFCRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG
        MLF VGSIFLFTIGGLT IVPAN G+DIAL DTYYVVAHFHYVL M  +  L      HYWVGKIF RTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG
Subjt:  MLFTVGSIFLFTIGGLTRIVPANLGIDIALCDTYYVVAHFHYVLPMPFLLYLQDVETNHYWVGKIFCRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG

Query:  MPRRIPDYPYAYARWN
        MPRRIPDYP AYA WN
Subjt:  MPRRIPDYPYAYARWN

ABY83874.1 cytochrome oxidase subunit 1, partial [Neoachmandra indica]

3.3e-45

82.76

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Query:  MLFTVGSIFLFTIGGLTRIVPANLGIDIALCDTYYVVAHFHYVLPMPFLLYLQDVETNHYWVGKIFCRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG
        MLF VGSIFLFTIGGLT IVPAN G+DIAL DTYYVVAHFHYVL M  +  L      HYWVGKIF RTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG
Subjt:  MLFTVGSIFLFTIGGLTRIVPANLGIDIALCDTYYVVAHFHYVLPMPFLLYLQDVETNHYWVGKIFCRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG

Query:  MPRRIPDYPYAYARWN
        MPRRIPDYP AYA WN
Subjt:  MPRRIPDYPYAYARWN

YP_009913642.1 cytochrome c oxidase subunit 1 [Luffa acutangula]

3.3e-45

82.76

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Query:  MLFTVGSIFLFTIGGLTRIVPANLGIDIALCDTYYVVAHFHYVLPMPFLLYLQDVETNHYWVGKIFCRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG
        MLF VGSIFLFTIGGLT IVPAN G+DIAL DTYYVVAHFHYVL M  +  L      HYWVGKIF RTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG
Subjt:  MLFTVGSIFLFTIGGLTRIVPANLGIDIALCDTYYVVAHFHYVLPMPFLLYLQDVETNHYWVGKIFCRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG

Query:  MPRRIPDYPYAYARWN
        MPRRIPDYP AYA WN
Subjt:  MPRRIPDYPYAYARWN

TrEMBL top hits

e value

%identity

Alignment

A0A5A7UCF6 Cytochrome c oxidase subunit 1

1.6e-45

82.76

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Query:  MLFTVGSIFLFTIGGLTRIVPANLGIDIALCDTYYVVAHFHYVLPMPFLLYLQDVETNHYWVGKIFCRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG
        MLF VGSIFLFTIGGLT IVPAN G+DIAL DTYYVVAHFHYVL M  +  L      HYWVGKIF RTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG
Subjt:  MLFTVGSIFLFTIGGLTRIVPANLGIDIALCDTYYVVAHFHYVLPMPFLLYLQDVETNHYWVGKIFCRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG

Query:  MPRRIPDYPYAYARWN
        MPRRIPDYP AYA WN
Subjt:  MPRRIPDYPYAYARWN

A0A7D6J6S5 Cytochrome c oxidase subunit 1

1.6e-45

82.76

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Query:  MLFTVGSIFLFTIGGLTRIVPANLGIDIALCDTYYVVAHFHYVLPMPFLLYLQDVETNHYWVGKIFCRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG
        MLF VGSIFLFTIGGLT IVPAN G+DIAL DTYYVVAHFHYVL M  +  L      HYWVGKIF RTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG
Subjt:  MLFTVGSIFLFTIGGLTRIVPANLGIDIALCDTYYVVAHFHYVLPMPFLLYLQDVETNHYWVGKIFCRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG

Query:  MPRRIPDYPYAYARWN
        MPRRIPDYP AYA WN
Subjt:  MPRRIPDYPYAYARWN

B0FA80 Cytochrome c oxidase subunit 1 (Fragment)

1.6e-45

82.76

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Query:  MLFTVGSIFLFTIGGLTRIVPANLGIDIALCDTYYVVAHFHYVLPMPFLLYLQDVETNHYWVGKIFCRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG
        MLF VGSIFLFTIGGLT IVPAN G+DIAL DTYYVVAHFHYVL M  +  L      HYWVGKIF RTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG
Subjt:  MLFTVGSIFLFTIGGLTRIVPANLGIDIALCDTYYVVAHFHYVLPMPFLLYLQDVETNHYWVGKIFCRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG

Query:  MPRRIPDYPYAYARWN
        MPRRIPDYP AYA WN
Subjt:  MPRRIPDYPYAYARWN

B4XVS1 Cytochrome c oxidase subunit 1 (Fragment)

1.6e-45

82.76

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Query:  MLFTVGSIFLFTIGGLTRIVPANLGIDIALCDTYYVVAHFHYVLPMPFLLYLQDVETNHYWVGKIFCRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG
        MLF VGSIFLFTIGGLT IVPAN G+DIAL DTYYVVAHFHYVL M  +  L      HYWVGKIF RTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG
Subjt:  MLFTVGSIFLFTIGGLTRIVPANLGIDIALCDTYYVVAHFHYVLPMPFLLYLQDVETNHYWVGKIFCRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG

Query:  MPRRIPDYPYAYARWN
        MPRRIPDYP AYA WN
Subjt:  MPRRIPDYPYAYARWN

G3EU24 Cytochrome c oxidase subunit 1

1.6e-45

82.76

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Query:  MLFTVGSIFLFTIGGLTRIVPANLGIDIALCDTYYVVAHFHYVLPMPFLLYLQDVETNHYWVGKIFCRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG
        MLF VGSIFLFTIGGLT IVPAN G+DIAL DTYYVVAHFHYVL M  +  L      HYWVGKIF RTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG
Subjt:  MLFTVGSIFLFTIGGLTRIVPANLGIDIALCDTYYVVAHFHYVLPMPFLLYLQDVETNHYWVGKIFCRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG

Query:  MPRRIPDYPYAYARWN
        MPRRIPDYP AYA WN
Subjt:  MPRRIPDYPYAYARWN

SwissProt top hits

e value

%identity

Alignment

P07506 Cytochrome c oxidase subunit 1

4.4e-45

80.17

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Query:  MLFTVGSIFLFTIGGLTRIVPANLGIDIALCDTYYVVAHFHYVLPMPFLLYLQDVETNHYWVGKIFCRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG
        MLF VG IFLFTIGGLT IV AN G+DIAL DTYYVVAHFHYVL M  +  L      HYWVGKIF RTYPETLGQIHFWITFFGVN TLFPMHFLGLSG
Subjt:  MLFTVGSIFLFTIGGLTRIVPANLGIDIALCDTYYVVAHFHYVLPMPFLLYLQDVETNHYWVGKIFCRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG

Query:  MPRRIPDYPYAYARWN
        MPRRIPDYP AYA WN
Subjt:  MPRRIPDYPYAYARWN

P08742 Cytochrome c oxidase subunit 1

6.4e-44

78.45

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Query:  MLFTVGSIFLFTIGGLTRIVPANLGIDIALCDTYYVVAHFHYVLPMPFLLYLQDVETNHYWVGKIFCRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG
        MLF VG IFLFTIGGLT IV AN G+DIAL DTYYVVAHFHYVL M  +  L      +YWVGKIF RTYPETLGQIHFWITFFGVN T FPMHFLGLSG
Subjt:  MLFTVGSIFLFTIGGLTRIVPANLGIDIALCDTYYVVAHFHYVLPMPFLLYLQDVETNHYWVGKIFCRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG

Query:  MPRRIPDYPYAYARWN
        MPRRIPDYP AYA WN
Subjt:  MPRRIPDYPYAYARWN

P12786 Cytochrome c oxidase subunit 1

8.9e-46

80.17

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Query:  MLFTVGSIFLFTIGGLTRIVPANLGIDIALCDTYYVVAHFHYVLPMPFLLYLQDVETNHYWVGKIFCRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG
        MLF VG IFLFTIGGLT IVPAN G+DIAL DTYYVVAHFHYVL M  +  L      HYWVGKIF RTYPETLG+IHFWITFFGVN TLFPMHFLGLSG
Subjt:  MLFTVGSIFLFTIGGLTRIVPANLGIDIALCDTYYVVAHFHYVLPMPFLLYLQDVETNHYWVGKIFCRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG

Query:  MPRRIPDYPYAYARWN
        MPRRIPDYP AYA WN
Subjt:  MPRRIPDYPYAYARWN

P60620 Cytochrome c oxidase subunit 1

6.4e-44

78.45

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Query:  MLFTVGSIFLFTIGGLTRIVPANLGIDIALCDTYYVVAHFHYVLPMPFLLYLQDVETNHYWVGKIFCRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG
        MLF VG IFLFTIGGLT IV AN G+DIAL DTYYVVAHFHYVL M  +  L      +YWVGKIF RTYPETLGQIHFWITFFGVN T FPMHFLGLSG
Subjt:  MLFTVGSIFLFTIGGLTRIVPANLGIDIALCDTYYVVAHFHYVLPMPFLLYLQDVETNHYWVGKIFCRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG

Query:  MPRRIPDYPYAYARWN
        MPRRIPDYP AYA WN
Subjt:  MPRRIPDYPYAYARWN

P68540 Cytochrome c oxidase subunit 1

6.4e-44

78.45

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Query:  MLFTVGSIFLFTIGGLTRIVPANLGIDIALCDTYYVVAHFHYVLPMPFLLYLQDVETNHYWVGKIFCRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG
        MLF VG IFLFTIGGLT IV AN G+DIAL DTYYVVAHFHYVL M  +  L      +YWVGKIF RTYPETLGQIHFWITFFGVN T FPMHFLGLSG
Subjt:  MLFTVGSIFLFTIGGLTRIVPANLGIDIALCDTYYVVAHFHYVLPMPFLLYLQDVETNHYWVGKIFCRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG

Query:  MPRRIPDYPYAYARWN
        MPRRIPDYP AYA WN
Subjt:  MPRRIPDYPYAYARWN

Arabidopsis top hits

e value

%identity

Alignment

ATMG01360.1 cytochrome oxidase

4.5e-45

78.45

Show/hide

Query:  MLFTVGSIFLFTIGGLTRIVPANLGIDIALCDTYYVVAHFHYVLPMPFLLYLQDVETNHYWVGKIFCRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG
        MLF VG IFLFTIGGLT IV AN G+DIAL DTYYVVAHFHYVL M  +  L      +YWVGKIF RTYPETLGQIHFWITFFGVN T FPMHFLGLSG
Subjt:  MLFTVGSIFLFTIGGLTRIVPANLGIDIALCDTYYVVAHFHYVLPMPFLLYLQDVETNHYWVGKIFCRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSG

Query:  MPRRIPDYPYAYARWN
        MPRRIPDYP AYA WN
Subjt:  MPRRIPDYPYAYARWN

Sequences

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CDS sequence

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ATGTTATTTACTGTAGGGTCCATCTTTTTGTTCACCATAGGAGGACTCACTAGAATAGTCCCGGCAAATTTAGGGATAGACATTGCTCTATGTGATACTTATTAT
GTGGTTGCACATTTCCATTATGTACTTCCTATGCCGTTTTTGCTTTATTTGCAGGATGTAGAAACTAATCACTATTGGGTGGGTAAAATCTTTTGTCGGACATAC
CCTGAAACTTTAGGTCAAATCCATTTTTGGATCACTTTTTTCGGGGTTAATCCGACCCTCTTTCCCATGCATTTCTTAGGGCTTTCGGGTATGCCACGTCGCATT
CCTGATTATCCATATGCTTACGCTAGATGGAAT

mRNA sequence

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Protein sequence

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MLFTVGSIFLFTIGGLTRIVPANLGIDIALCDTYYVVAHFHYVLPMPFLLYLQDVETNHYWVGKIFCRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSGMPRRI
PDYPYAYARWN

MS008023 (gene) of Bitter gourd (TR) v1 genome