CuGenDBv2

Gene ID	MS008052
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	B-like cyclin
Genome location	scaffold499:23788..24707
RNA-Seq Expression	MS008052
Synteny	MS008052
Gene Ontology terms	GO:0007049 - cell cycle (biological process) GO:0051301 - cell division (biological process) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR039361 - Cyclin

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0032145.1 cyclin-J18 isoform X2 [Cucumis melo var. makuwa]

6.7e-66

76.27

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Query:  FTSSNNSGNWLLQPITESNLQLFALVSLWISSKVGSSPLSEDECLSLSCNSTIYILLQSHSSHPLSIKLLKSFGDKMIKEQHFMTRDFLDAVLNFEIGTA
        FTSSN+S  WLLQPITESNLQLFALVSLWISSK+                         H+SHPLSIKLLK+FGD MIKEQHFMTRDFLDA+LNFEIGTA
Subjt:  FTSSNNSGNWLLQPITESNLQLFALVSLWISSKVGSSPLSEDECLSLSCNSTIYILLQSHSSHPLSIKLLKSFGDKMIKEQHFMTRDFLDAVLNFEIGTA

Query:  HITFIYLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLAASILVASYLITVPVQEWEFPILPW
        +ITFI+LEELL  FK+VAKVGELVNWEACMDVMDLLYE+EETSVFY SPCSLAA+ILVASYLITVPVQEWEFPI+PW
Subjt:  HITFIYLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLAASILVASYLITVPVQEWEFPILPW

XP_022156061.1 cyclin-J18 [Momordica charantia]

9.6e-73

83.06

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Query:  FTSSNNSGNWLLQPITESNLQLFALVSLWISSKVGSSPLSEDECLSLSCNSTIYILLQSHSSHPLSIKLLKSFGDKMIKEQHFMTRDFLDA------VLN
        FTSSNNSGNWLLQPITESNLQLFALVSLWISSK                         SHSSHPLSIKLLKSFGDKMIKEQHFMTRDFLDA      VLN
Subjt:  FTSSNNSGNWLLQPITESNLQLFALVSLWISSKVGSSPLSEDECLSLSCNSTIYILLQSHSSHPLSIKLLKSFGDKMIKEQHFMTRDFLDA------VLN

Query:  FEIGTAHITFIYLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLAASILVASYLITVPVQEWEFPILPW
        FEIGTAHITFIYLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLAASILVASYLITVPVQEWEFPILPW
Subjt:  FEIGTAHITFIYLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLAASILVASYLITVPVQEWEFPILPW

XP_022957561.1 cyclin-J18 isoform X2 [Cucurbita moschata]

1.0e-66

77.84

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Query:  TSSNNSGNWLLQPITESNLQLFALVSLWISSKVGSSPLSEDECLSLSCNSTIYILLQSHSSHPLSIKLLKSFGDKMIKEQHFMTRDFLDAVLNFEIGTAH
        TSSN S NWLLQPITESNLQLFALVSLWISSK+                         H+SHPLSIKLLKSFGDKMIKEQHFMTRD LDA+L FEIGTA+
Subjt:  TSSNNSGNWLLQPITESNLQLFALVSLWISSKVGSSPLSEDECLSLSCNSTIYILLQSHSSHPLSIKLLKSFGDKMIKEQHFMTRDFLDAVLNFEIGTAH

Query:  ITFIYLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLAASILVASYLITVPVQEWEFPILPW
        ITF++LEELLIQFK+VAKVGELVNWEACMDVMDLLYEKEETSV YSSPCSLAA+ILVASYLITVPVQEWEFP+LPW
Subjt:  ITFIYLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLAASILVASYLITVPVQEWEFPILPW

XP_023525666.1 cyclin-J18 isoform X2 [Cucurbita pepo subsp. pepo]

1.0e-66

77.84

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Query:  TSSNNSGNWLLQPITESNLQLFALVSLWISSKVGSSPLSEDECLSLSCNSTIYILLQSHSSHPLSIKLLKSFGDKMIKEQHFMTRDFLDAVLNFEIGTAH
        TSSN S NWLLQPITESNLQLFALVSLWISSK+                         H+SHPLSIKLLKSFGDKMIKEQHFMTRD LDA+L FEIGTA+
Subjt:  TSSNNSGNWLLQPITESNLQLFALVSLWISSKVGSSPLSEDECLSLSCNSTIYILLQSHSSHPLSIKLLKSFGDKMIKEQHFMTRDFLDAVLNFEIGTAH

Query:  ITFIYLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLAASILVASYLITVPVQEWEFPILPW
        ITF++LEELLIQFK+VAKVGELVNWEACMDVMDLLYEKEETSV YSSPCSLAA+ILVASYLITVPVQEWEFP+LPW
Subjt:  ITFIYLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLAASILVASYLITVPVQEWEFPILPW

XP_023525674.1 cyclin-J18 isoform X3 [Cucurbita pepo subsp. pepo]

9.7e-65

75.27

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Query:  TSSNNSGNWLLQPITESNLQLFALVSLWISSKVGSSPLSEDECLSLSCNSTIYILLQSHSSHPLSIKLLKSFGDKMIKEQHFMTRDFLDA------VLNF
        TSSN S NWLLQPITESNLQLFALVSLWISSK+                         H+SHPLSIKLLKSFGDKMIKEQHFMTRD LDA      +L F
Subjt:  TSSNNSGNWLLQPITESNLQLFALVSLWISSKVGSSPLSEDECLSLSCNSTIYILLQSHSSHPLSIKLLKSFGDKMIKEQHFMTRDFLDA------VLNF

Query:  EIGTAHITFIYLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLAASILVASYLITVPVQEWEFPILPW
        EIGTA+ITF++LEELLIQFK+VAKVGELVNWEACMDVMDLLYEKEETSV YSSPCSLAA+ILVASYLITVPVQEWEFP+LPW
Subjt:  EIGTAHITFIYLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLAASILVASYLITVPVQEWEFPILPW

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SSH3 B-like cyclin

3.2e-66

76.27

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Query:  FTSSNNSGNWLLQPITESNLQLFALVSLWISSKVGSSPLSEDECLSLSCNSTIYILLQSHSSHPLSIKLLKSFGDKMIKEQHFMTRDFLDAVLNFEIGTA
        FTSSN+S  WLLQPITESNLQLFALVSLWISSK+                         H+SHPLSIKLLK+FGD MIKEQHFMTRDFLDA+LNFEIGTA
Subjt:  FTSSNNSGNWLLQPITESNLQLFALVSLWISSKVGSSPLSEDECLSLSCNSTIYILLQSHSSHPLSIKLLKSFGDKMIKEQHFMTRDFLDAVLNFEIGTA

Query:  HITFIYLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLAASILVASYLITVPVQEWEFPILPW
        +ITFI+LEELL  FK+VAKVGELVNWEACMDVMDLLYE+EETSVFY SPCSLAA+ILVASYLITVPVQEWEFPI+PW
Subjt:  HITFIYLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLAASILVASYLITVPVQEWEFPILPW

A0A6J1DTP7 B-like cyclin

4.7e-73

83.06

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Query:  FTSSNNSGNWLLQPITESNLQLFALVSLWISSKVGSSPLSEDECLSLSCNSTIYILLQSHSSHPLSIKLLKSFGDKMIKEQHFMTRDFLDA------VLN
        FTSSNNSGNWLLQPITESNLQLFALVSLWISSK                         SHSSHPLSIKLLKSFGDKMIKEQHFMTRDFLDA      VLN
Subjt:  FTSSNNSGNWLLQPITESNLQLFALVSLWISSKVGSSPLSEDECLSLSCNSTIYILLQSHSSHPLSIKLLKSFGDKMIKEQHFMTRDFLDA------VLN

Query:  FEIGTAHITFIYLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLAASILVASYLITVPVQEWEFPILPW
        FEIGTAHITFIYLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLAASILVASYLITVPVQEWEFPILPW
Subjt:  FEIGTAHITFIYLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLAASILVASYLITVPVQEWEFPILPW

A0A6J1GZG4 B-like cyclin

4.7e-65

75.27

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Query:  TSSNNSGNWLLQPITESNLQLFALVSLWISSKVGSSPLSEDECLSLSCNSTIYILLQSHSSHPLSIKLLKSFGDKMIKEQHFMTRDFLDA------VLNF
        TSSN S NWLLQPITESNLQLFALVSLWISSK+                         H+SHPLSIKLLKSFGDKMIKEQHFMTRD LDA      +L F
Subjt:  TSSNNSGNWLLQPITESNLQLFALVSLWISSKVGSSPLSEDECLSLSCNSTIYILLQSHSSHPLSIKLLKSFGDKMIKEQHFMTRDFLDA------VLNF

Query:  EIGTAHITFIYLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLAASILVASYLITVPVQEWEFPILPW
        EIGTA+ITF++LEELLIQFK+VAKVGELVNWEACMDVMDLLYEKEETSV YSSPCSLAA+ILVASYLITVPVQEWEFP+LPW
Subjt:  EIGTAHITFIYLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLAASILVASYLITVPVQEWEFPILPW

A0A6J1GZK0 B-like cyclin

5.0e-67

77.84

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Query:  TSSNNSGNWLLQPITESNLQLFALVSLWISSKVGSSPLSEDECLSLSCNSTIYILLQSHSSHPLSIKLLKSFGDKMIKEQHFMTRDFLDAVLNFEIGTAH
        TSSN S NWLLQPITESNLQLFALVSLWISSK+                         H+SHPLSIKLLKSFGDKMIKEQHFMTRD LDA+L FEIGTA+
Subjt:  TSSNNSGNWLLQPITESNLQLFALVSLWISSKVGSSPLSEDECLSLSCNSTIYILLQSHSSHPLSIKLLKSFGDKMIKEQHFMTRDFLDAVLNFEIGTAH

Query:  ITFIYLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLAASILVASYLITVPVQEWEFPILPW
        ITF++LEELLIQFK+VAKVGELVNWEACMDVMDLLYEKEETSV YSSPCSLAA+ILVASYLITVPVQEWEFP+LPW
Subjt:  ITFIYLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLAASILVASYLITVPVQEWEFPILPW

A0A6J1H0W7 B-like cyclin

4.7e-65

75.27

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Query:  TSSNNSGNWLLQPITESNLQLFALVSLWISSKVGSSPLSEDECLSLSCNSTIYILLQSHSSHPLSIKLLKSFGDKMIKEQHFMTRDFLDA------VLNF
        TSSN S NWLLQPITESNLQLFALVSLWISSK+                         H+SHPLSIKLLKSFGDKMIKEQHFMTRD LDA      +L F
Subjt:  TSSNNSGNWLLQPITESNLQLFALVSLWISSKVGSSPLSEDECLSLSCNSTIYILLQSHSSHPLSIKLLKSFGDKMIKEQHFMTRDFLDA------VLNF

Query:  EIGTAHITFIYLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLAASILVASYLITVPVQEWEFPILPW
        EIGTA+ITF++LEELLIQFK+VAKVGELVNWEACMDVMDLLYEKEETSV YSSPCSLAA+ILVASYLITVPVQEWEFP+LPW
Subjt:  EIGTAHITFIYLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLAASILVASYLITVPVQEWEFPILPW

SwissProt top hits

e value

%identity

Alignment

Q0DTM7 Cyclin-J18-like

2.3e-40

45.71

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Query:  NWLLQPITESNLQLFALVSLWISSKVGSSPLSEDECLSLSCNSTIYILLQSHSSHPLSIKLLKSFGDKMIKEQHFMTRDFLDA------VLNFEIGTAHI
        +WLL+P+ +SNL+LFALV++WI+SK+                         H   PLS+K LK+ GD++I +QHF  RDF +A      V+ + IG+ +I
Subjt:  NWLLQPITESNLQLFALVSLWISSKVGSSPLSEDECLSLSCNSTIYILLQSHSSHPLSIKLLKSFGDKMIKEQHFMTRDFLDA------VLNFEIGTAHI

Query:  TFIYLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLAASILVASYLITVPVQEWEFPILPW
         F YLEELL+QF++++K+G+L+N + CM+++D+LYE E++S  ++SPC LAAS LV +Y I+VP Q WEFPILPW
Subjt:  TFIYLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLAASILVASYLITVPVQEWEFPILPW

Q9C5X2 Cyclin-J18

4.7e-46

55.74

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Query:  FTSSNNSGNWLLQPITESNLQLFALVSLWISSKVGSSPLSEDECLSLSCNSTIYILLQSHSSHPLSIKLLKSFGDKMIKEQHFMTRDFLDA------VLN
        F     + +WLLQP+ ESNLQLF L+S+WIS K+                         H +  LS+  LKSFGDK+I EQ FM RDFLDA      VL 
Subjt:  FTSSNNSGNWLLQPITESNLQLFALVSLWISSKVGSSPLSEDECLSLSCNSTIYILLQSHSSHPLSIKLLKSFGDKMIKEQHFMTRDFLDA------VLN

Query:  FEIGTAHITFIYLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLAASILVASYLITVPVQEWEFPILPW
        FEIGT +I +  LE+LLIQFK+VAKVGE +N+EACMD+MDLLYEKE+TS+ Y S  SLAASILV+SY+ITVP Q++EFPILPW
Subjt:  FEIGTAHITFIYLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLAASILVASYLITVPVQEWEFPILPW

Arabidopsis top hits

e value

%identity

Alignment

AT2G01905.1 cyclin J18

3.3e-47

55.74

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Query:  FTSSNNSGNWLLQPITESNLQLFALVSLWISSKVGSSPLSEDECLSLSCNSTIYILLQSHSSHPLSIKLLKSFGDKMIKEQHFMTRDFLDA------VLN
        F     + +WLLQP+ ESNLQLF L+S+WIS K+                         H +  LS+  LKSFGDK+I EQ FM RDFLDA      VL 
Subjt:  FTSSNNSGNWLLQPITESNLQLFALVSLWISSKVGSSPLSEDECLSLSCNSTIYILLQSHSSHPLSIKLLKSFGDKMIKEQHFMTRDFLDA------VLN

Query:  FEIGTAHITFIYLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLAASILVASYLITVPVQEWEFPILPW
        FEIGT +I +  LE+LLIQFK+VAKVGE +N+EACMD+MDLLYEKE+TS+ Y S  SLAASILV+SY+ITVP Q++EFPILPW
Subjt:  FEIGTAHITFIYLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLAASILVASYLITVPVQEWEFPILPW

Sequences

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CDS sequence

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TTCACCAGCAGCAATAACTCAGGAAATTGGCTTCTGCAACCAATCACAGAAAGCAATTTGCAGTTATTTGCACTTGTTTCCCTATGGATTTCTAGCAAAGTGGGTTCTTC
TCCTCTTTCTGAAGATGAGTGCCTTTCTTTGTCCTGTAACTCAACCATATATATTCTTTTGCAGTCCCACTCTTCTCATCCCCTTTCAATAAAACTTCTCAAGTCTTTTG
GGGATAAGATGATTAAGGAACAACATTTCATGACCCGAGATTTCTTGGATGCAGTATTGAATTTCGAGATCGGTACTGCACATATCACTTTTATATATCTCGAAGAACTT
CTTATTCAGTTCAAGAAAGTAGCGAAAGTTGGGGAGCTTGTGAACTGGGAAGCATGCATGGATGTAATGGATCTTCTTTATGAAAAAGAGGAGACATCTGTATTTTATAG
TTCTCCTTGTTCTCTAGCTGCTTCCATCTTGGTTGCTTCATATCTCATCACTGTTCCAGTTCAAGAGTGGGAATTTCCAATCCTTCCCTGG

mRNA sequence

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Protein sequence

Show/hide protein sequence

FTSSNNSGNWLLQPITESNLQLFALVSLWISSKVGSSPLSEDECLSLSCNSTIYILLQSHSSHPLSIKLLKSFGDKMIKEQHFMTRDFLDAVLNFEIGTAHITFIYLEEL
LIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLAASILVASYLITVPVQEWEFPILPW

MS008052 (gene) of Bitter gourd (TR) v1 genome