; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS008090 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008090
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionupstream activation factor subunit spp27-like
Genome locationscaffold703:177984..180884
RNA-Seq ExpressionMS008090
SyntenyMS008090
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR003121 - SWIB/MDM2 domain
IPR014876 - DEK, C-terminal
IPR019835 - SWIB domain
IPR036885 - SWIB/MDM2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150254.1 angiomotin isoform X2 [Cucumis sativus]1.3e-16388.3Show/hide
Query:  MVTDQELSQAIQCLLRDSASAANPSAFSSLNAVVQELETKLGLDLSHKVDFIHAQIQFLLRSHPL----HPQHHHRHHQPPPPQPPPPPQKDLFTLHQTP
        MVTDQELSQAIQCLLRDSAS  NP+ FSSLNAVVQEL+TKLGLDLSHK+DFIHAQIQF+LRSHP     H  HHH HHQ    Q  P  QKDLF LHQ+P
Subjt:  MVTDQELSQAIQCLLRDSASAANPSAFSSLNAVVQELETKLGLDLSHKVDFIHAQIQFLLRSHPL----HPQHHHRHHQPPPPQPPPPPQKDLFTLHQTP

Query:  NFQSAPSPTSSAFHTFTAQPPPPKPDTAVAPTLAPSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKR
        NFQSAPSPTSSAFHTF+AQPPP KPD+ VAPT+  SDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKR
Subjt:  NFQSAPSPTSSAFHTFTAQPPPPKPDTAVAPTLAPSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKR

Query:  KIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESGIGVKGAESSICPSVIISEALAKFFGVDGREMLQTEVLRRIWEYIKVNHL
        KIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENES + VK AE SICPSVIISEALA FFGVDGREMLQ+EVLRRIWEYIKVNHL
Subjt:  KIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESGIGVKGAESSICPSVIISEALAKFFGVDGREMLQTEVLRRIWEYIKVNHL

Query:  EDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
        EDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHIFRRS
Subjt:  EDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS

XP_008447697.1 PREDICTED: uncharacterized protein LOC103490111 isoform X1 [Cucumis melo]2.1e-16188.05Show/hide
Query:  MVTDQELSQAIQCLLRDSASAANPSAFSSLNAVVQELETKLGLDLSHKVDFIHAQIQFLLRSHPLHP---QHHHRHH--QPPPPQPPPPPQKDLFTLHQT
        MVTDQELSQAIQCLLRDSAS  NP+ FSSLNAVVQEL+TKLGLDLSHK+DFIHAQIQF+LRSHP  P   QHHH HH  Q    Q  P  QKDLF LHQ+
Subjt:  MVTDQELSQAIQCLLRDSASAANPSAFSSLNAVVQELETKLGLDLSHKVDFIHAQIQFLLRSHPLHP---QHHHRHH--QPPPPQPPPPPQKDLFTLHQT

Query:  PNFQSAPSPTSSAFHTFTAQPPPPKPDTAVAPTLAPSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK
        PNFQSAPSPTSSAFHTFTAQPP  K D+ VAPT+  SDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK
Subjt:  PNFQSAPSPTSSAFHTFTAQPPPPKPDTAVAPTLAPSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK

Query:  RKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESGIGVKGAESSICPSVIISEALAKFFGVDGREMLQTEVLRRIWEYIKVNH
        RKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENES + VK AE SICPSVIISEALA FFGVDGREMLQ+EVLRRIWEYIKVNH
Subjt:  RKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESGIGVKGAESSICPSVIISEALAKFFGVDGREMLQTEVLRRIWEYIKVNH

Query:  LEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
        LEDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHIFRRS
Subjt:  LEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS

XP_022139748.1 uncharacterized protein LOC111010586 [Momordica charantia]2.7e-188100Show/hide
Query:  MVTDQELSQAIQCLLRDSASAANPSAFSSLNAVVQELETKLGLDLSHKVDFIHAQIQFLLRSHPLHPQHHHRHHQPPPPQPPPPPQKDLFTLHQTPNFQS
        MVTDQELSQAIQCLLRDSASAANPSAFSSLNAVVQELETKLGLDLSHKVDFIHAQIQFLLRSHPLHPQHHHRHHQPPPPQPPPPPQKDLFTLHQTPNFQS
Subjt:  MVTDQELSQAIQCLLRDSASAANPSAFSSLNAVVQELETKLGLDLSHKVDFIHAQIQFLLRSHPLHPQHHHRHHQPPPPQPPPPPQKDLFTLHQTPNFQS

Query:  APSPTSSAFHTFTAQPPPPKPDTAVAPTLAPSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIIC
        APSPTSSAFHTFTAQPPPPKPDTAVAPTLAPSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIIC
Subjt:  APSPTSSAFHTFTAQPPPPKPDTAVAPTLAPSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIIC

Query:  NDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESGIGVKGAESSICPSVIISEALAKFFGVDGREMLQTEVLRRIWEYIKVNHLEDPL
        NDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESGIGVKGAESSICPSVIISEALAKFFGVDGREMLQTEVLRRIWEYIKVNHLEDPL
Subjt:  NDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESGIGVKGAESSICPSVIISEALAKFFGVDGREMLQTEVLRRIWEYIKVNHLEDPL

Query:  NPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
        NPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
Subjt:  NPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS

XP_031744592.1 angiomotin isoform X1 [Cucumis sativus]3.3e-16288.05Show/hide
Query:  MVTDQELSQAIQCLLRDSASAANPSAFSSLNAVVQELETKLGLDLSHKVDFIHAQIQFLLRSHPL----HPQHHHRHHQPPPPQPPPPPQKDLFTLHQTP
        MVTDQELSQAIQCLLRDSAS  NP+ FSSLNAVVQEL+TKLGLDLSHK+DFIHAQIQF+LRSHP     H  HHH HHQ    Q  P  QKDLF LHQ+P
Subjt:  MVTDQELSQAIQCLLRDSASAANPSAFSSLNAVVQELETKLGLDLSHKVDFIHAQIQFLLRSHPL----HPQHHHRHHQPPPPQPPPPPQKDLFTLHQTP

Query:  NFQSAPSPTSSAFHTFTAQPPPPKPDTAVAPTLAPSDPPKE-STQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK
        NFQSAPSPTSSAFHTF+AQPPP KPD+ VAPT+  SDPPKE STQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK
Subjt:  NFQSAPSPTSSAFHTFTAQPPPPKPDTAVAPTLAPSDPPKE-STQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK

Query:  RKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESGIGVKGAESSICPSVIISEALAKFFGVDGREMLQTEVLRRIWEYIKVNH
        RKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENES + VK AE SICPSVIISEALA FFGVDGREMLQ+EVLRRIWEYIKVNH
Subjt:  RKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESGIGVKGAESSICPSVIISEALAKFFGVDGREMLQTEVLRRIWEYIKVNH

Query:  LEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
        LEDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHIFRRS
Subjt:  LEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS

XP_038900174.1 uncharacterized protein LOC120087296 isoform X2 [Benincasa hispida]4.3e-16288.53Show/hide
Query:  MVTDQELSQAIQCLLRDSASAANPSAFSSLNAVVQELETKLGLDLSHKVDFIHAQIQFLLRSHPL--HPQHHHRHHQPPPPQPPPPPQKDLFTLHQTPNF
        MVTDQELSQAIQCLLRDSASA NP+  SSLNAVVQEL+TKLGLDLSHKVDFIHAQIQF+LRSHP   HP HHH H Q       P  QKDLF LHQ+PNF
Subjt:  MVTDQELSQAIQCLLRDSASAANPSAFSSLNAVVQELETKLGLDLSHKVDFIHAQIQFLLRSHPL--HPQHHHRHHQPPPPQPPPPPQKDLFTLHQTPNF

Query:  QSAPSPTSSAFHTFTAQPPPPKPDTAVAPTLAPSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKI
        QSAPSPTSSAFHTFTAQ PP K ++AV+PT+  SDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKI
Subjt:  QSAPSPTSSAFHTFTAQPPPPKPDTAVAPTLAPSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKI

Query:  ICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESGIGVKGAESSICPSVIISEALAKFFGVDGREMLQTEVLRRIWEYIKVNHLED
        ICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENES +GVKGAE SICPSVIISEALA FFGVDGREMLQ+EVLRRIWEYIKVNHLED
Subjt:  ICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESGIGVKGAESSICPSVIISEALAKFFGVDGREMLQTEVLRRIWEYIKVNHLED

Query:  PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
        PLNPMAVLCD KL+ELFGCESISALGIPEVLGRHHIFRRS
Subjt:  PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS

TrEMBL top hitse value%identityAlignment
A0A0A0LEG4 Uncharacterized protein6.4e-16488.3Show/hide
Query:  MVTDQELSQAIQCLLRDSASAANPSAFSSLNAVVQELETKLGLDLSHKVDFIHAQIQFLLRSHPL----HPQHHHRHHQPPPPQPPPPPQKDLFTLHQTP
        MVTDQELSQAIQCLLRDSAS  NP+ FSSLNAVVQEL+TKLGLDLSHK+DFIHAQIQF+LRSHP     H  HHH HHQ    Q  P  QKDLF LHQ+P
Subjt:  MVTDQELSQAIQCLLRDSASAANPSAFSSLNAVVQELETKLGLDLSHKVDFIHAQIQFLLRSHPL----HPQHHHRHHQPPPPQPPPPPQKDLFTLHQTP

Query:  NFQSAPSPTSSAFHTFTAQPPPPKPDTAVAPTLAPSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKR
        NFQSAPSPTSSAFHTF+AQPPP KPD+ VAPT+  SDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKR
Subjt:  NFQSAPSPTSSAFHTFTAQPPPPKPDTAVAPTLAPSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKR

Query:  KIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESGIGVKGAESSICPSVIISEALAKFFGVDGREMLQTEVLRRIWEYIKVNHL
        KIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENES + VK AE SICPSVIISEALA FFGVDGREMLQ+EVLRRIWEYIKVNHL
Subjt:  KIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESGIGVKGAESSICPSVIISEALAKFFGVDGREMLQTEVLRRIWEYIKVNHL

Query:  EDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
        EDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHIFRRS
Subjt:  EDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS

A0A1S3BI07 uncharacterized protein LOC103490111 isoform X11.0e-16188.05Show/hide
Query:  MVTDQELSQAIQCLLRDSASAANPSAFSSLNAVVQELETKLGLDLSHKVDFIHAQIQFLLRSHPLHP---QHHHRHH--QPPPPQPPPPPQKDLFTLHQT
        MVTDQELSQAIQCLLRDSAS  NP+ FSSLNAVVQEL+TKLGLDLSHK+DFIHAQIQF+LRSHP  P   QHHH HH  Q    Q  P  QKDLF LHQ+
Subjt:  MVTDQELSQAIQCLLRDSASAANPSAFSSLNAVVQELETKLGLDLSHKVDFIHAQIQFLLRSHPLHP---QHHHRHH--QPPPPQPPPPPQKDLFTLHQT

Query:  PNFQSAPSPTSSAFHTFTAQPPPPKPDTAVAPTLAPSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK
        PNFQSAPSPTSSAFHTFTAQPP  K D+ VAPT+  SDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK
Subjt:  PNFQSAPSPTSSAFHTFTAQPPPPKPDTAVAPTLAPSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK

Query:  RKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESGIGVKGAESSICPSVIISEALAKFFGVDGREMLQTEVLRRIWEYIKVNH
        RKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENES + VK AE SICPSVIISEALA FFGVDGREMLQ+EVLRRIWEYIKVNH
Subjt:  RKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESGIGVKGAESSICPSVIISEALAKFFGVDGREMLQTEVLRRIWEYIKVNH

Query:  LEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
        LEDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHIFRRS
Subjt:  LEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS

A0A5D3C9T5 Box A-binding factor isoform X21.0e-16188.05Show/hide
Query:  MVTDQELSQAIQCLLRDSASAANPSAFSSLNAVVQELETKLGLDLSHKVDFIHAQIQFLLRSHPLHP---QHHHRHH--QPPPPQPPPPPQKDLFTLHQT
        MVTDQELSQAIQCLLRDSAS  NP+ FSSLNAVVQEL+TKLGLDLSHK+DFIHAQIQF+LRSHP  P   QHHH HH  Q    Q  P  QKDLF LHQ+
Subjt:  MVTDQELSQAIQCLLRDSASAANPSAFSSLNAVVQELETKLGLDLSHKVDFIHAQIQFLLRSHPLHP---QHHHRHH--QPPPPQPPPPPQKDLFTLHQT

Query:  PNFQSAPSPTSSAFHTFTAQPPPPKPDTAVAPTLAPSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK
        PNFQSAPSPTSSAFHTFTAQPP  K D+ VAPT+  SDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK
Subjt:  PNFQSAPSPTSSAFHTFTAQPPPPKPDTAVAPTLAPSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK

Query:  RKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESGIGVKGAESSICPSVIISEALAKFFGVDGREMLQTEVLRRIWEYIKVNH
        RKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENES + VK AE SICPSVIISEALA FFGVDGREMLQ+EVLRRIWEYIKVNH
Subjt:  RKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESGIGVKGAESSICPSVIISEALAKFFGVDGREMLQTEVLRRIWEYIKVNH

Query:  LEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
        LEDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHIFRRS
Subjt:  LEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS

A0A6J1CGF4 uncharacterized protein LOC1110105861.3e-188100Show/hide
Query:  MVTDQELSQAIQCLLRDSASAANPSAFSSLNAVVQELETKLGLDLSHKVDFIHAQIQFLLRSHPLHPQHHHRHHQPPPPQPPPPPQKDLFTLHQTPNFQS
        MVTDQELSQAIQCLLRDSASAANPSAFSSLNAVVQELETKLGLDLSHKVDFIHAQIQFLLRSHPLHPQHHHRHHQPPPPQPPPPPQKDLFTLHQTPNFQS
Subjt:  MVTDQELSQAIQCLLRDSASAANPSAFSSLNAVVQELETKLGLDLSHKVDFIHAQIQFLLRSHPLHPQHHHRHHQPPPPQPPPPPQKDLFTLHQTPNFQS

Query:  APSPTSSAFHTFTAQPPPPKPDTAVAPTLAPSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIIC
        APSPTSSAFHTFTAQPPPPKPDTAVAPTLAPSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIIC
Subjt:  APSPTSSAFHTFTAQPPPPKPDTAVAPTLAPSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIIC

Query:  NDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESGIGVKGAESSICPSVIISEALAKFFGVDGREMLQTEVLRRIWEYIKVNHLEDPL
        NDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESGIGVKGAESSICPSVIISEALAKFFGVDGREMLQTEVLRRIWEYIKVNHLEDPL
Subjt:  NDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESGIGVKGAESSICPSVIISEALAKFFGVDGREMLQTEVLRRIWEYIKVNHLEDPL

Query:  NPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
        NPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
Subjt:  NPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS

A0A6J1J2D3 uncharacterized protein LOC1114806268.4e-15685.55Show/hide
Query:  MVTDQELSQAIQCLLRDSASAANPSAFSSLNAVVQELETKLGLDLSHKVDFIHAQIQFLLRSHPLHPQHHHRHHQPPPPQPPPPPQKDLFTLHQTPNFQS
        MV++QELS+A+QCLLRDSAS +NP+ FSSLNAVV EL++KLGLDLSHKVDFIHAQIQ +LRSHP  PQ H  HH     QPPP  QKDL   HQ+PNF S
Subjt:  MVTDQELSQAIQCLLRDSASAANPSAFSSLNAVVQELETKLGLDLSHKVDFIHAQIQFLLRSHPLHPQHHHRHHQPPPPQPPPPPQKDLFTLHQTPNFQS

Query:  APSPTSSAFHTFTAQPPPPKPDTAVAP-TLAPSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKII
        APSPTSSAFHTFTAQPPP KP+TA AP T   SDPPKESTQTKTKRRGGPGGLNKLCGVSPELQ IVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKII
Subjt:  APSPTSSAFHTFTAQPPPPKPDTAVAP-TLAPSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKII

Query:  CNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESGIGVKGAESSICPSVIISEALAKFFGVDGREMLQTEVLRRIWEYIKVNHLEDP
        CNDELRLVFETDCTDMFKMNKLLAKHII LEPTKPSSSKKARVENE  I VK AE S+CPSVIISEALA FFGVDGREMLQ+EVLRRIWEYI+ NHLEDP
Subjt:  CNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESGIGVKGAESSICPSVIISEALAKFFGVDGREMLQTEVLRRIWEYIKVNHLEDP

Query:  LNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
        LNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
Subjt:  LNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS

SwissProt top hitse value%identityAlignment
O74503 Upstream activation factor subunit spp274.5e-1346.99Show/hide
Query:  KTKRRGGPGG--LNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLL
        K KR   P    LNK   +SP+L   +G  +L R + VK+LW YI+ ++LQDP++KR I+C+D+L+ VFE D   MF MNK L
Subjt:  KTKRRGGPGG--LNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLL

Q05024 Protein TRI14.5e-1339.58Show/hide
Query:  VSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHII-------PLEPTKPSSSKKARVENES
        +S  LQ  +G  ELPRT++VK +W YI++++LQ+P ++R+I+C++++  +F    T MF MNKLL KH+          E  K +  K+ ++ENES
Subjt:  VSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHII-------PLEPTKPSSSKKARVENES

Q08747 Upstream activation factor subunit UAF305.8e-1346.15Show/hide
Query:  VSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS
        +S  L +++G+ EL RTE+V++LWAYI+ +NLQ+P+NK++I+C+++L L+     T+MF+M+K+LA H+   EP K S
Subjt:  VSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS

Arabidopsis top hitse value%identityAlignment
AT1G49520.1 SWIB complex BAF60b domain-containing protein3.7e-3130.65Show/hide
Query:  SDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHI-----
        +D  K     K K+RG  GG NK+C +SP+L+  +G  +L RTE+VK++WAYIR+++LQDP+N+R I+C++ L  +F     +MF+MNK LAKHI     
Subjt:  SDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHI-----

Query:  ------------------------IPLEPTKPSSSKKARVENESGIGVK------------------GAESSICPSVIISEALAKFFGVDGREMLQTEVL
                                + +E    ++ +++R E +  +  +                  G  + +C    +S  L  F G    ++ +TEV+
Subjt:  ------------------------IPLEPTKPSSSKKARVENESGIGVK------------------GAESSICPSVIISEALAKFFGVDGREMLQTEVL

Query:  RRIWEYIKVNHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRH
        + +W+YIK N+L+DP +   ++CD  L+ LF  ESI+   + + L +H
Subjt:  RRIWEYIKVNHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRH

AT2G14880.1 SWIB/MDM2 domain superfamily protein6.0e-1335.25Show/hide
Query:  FTLHQTPNFQSAPSPTSSAFHTFTAQPPPPKPDTAVAPTLAPSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNL
        F   +T +F++  +P SS      A  P  K     A T A      ES++     +  P G+ K   VSPE+Q IV  PE+ RT+ +K++WAYI++++L
Subjt:  FTLHQTPNFQSAPSPTSSAFHTFTAQPPPPKPDTAVAPTLAPSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNL

Query:  QDPSNKRKIICNDELRLVFE-TDCTDMFKMNKLLAKHII
        QDP NKR+I+C+++L+ +FE  D     ++ KL+  H +
Subjt:  QDPSNKRKIICNDELRLVFE-TDCTDMFKMNKLLAKHII

AT3G19080.1 SWIB complex BAF60b domain-containing protein4.9e-3941.04Show/hide
Query:  PKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLE----
        P +S + K KR+GG GG  K+C +SPELQA  G  EL RTE+VK LW YI++NNLQDP++KR IIC++  R +F  +  +MF+MNK L KHI PLE    
Subjt:  PKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLE----

Query:  ---PTKPSSSKKARVEN-----ESGIGVKGAESSICPSVIISEALAKFFGVDGREMLQTEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLQELFGCESISA
            +K   + K ++E+     E     K  +  +   + +S+AL KF G     + + +V++R+WEYI  N L+DP +   V+CD KL+ELF  +S   
Subjt:  ---PTKPSSSKKARVEN-----ESGIGVKGAESSICPSVIISEALAKFFGVDGREMLQTEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLQELFGCESISA

Query:  LGIPEVLGRHHI
          + ++L  H I
Subjt:  LGIPEVLGRHHI

AT4G22360.1 SWIB complex BAF60b domain-containing protein1.6e-8247.83Show/hide
Query:  MVTDQELSQAIQCLLRDSASAANPSAFSSLNAVVQELETKLGLDLSHKVDFIHAQIQFLLRSHP------LHPQHHHRHHQPPPPQP-----------PP
        MV+DQ+L++ ++ LLR S    +PS+ +SL+++VQ+LE KLGLDL+ K  FI  QI  LLR+H              + H PPPP              P
Subjt:  MVTDQELSQAIQCLLRDSASAANPSAFSSLNAVVQELETKLGLDLSHKVDFIHAQIQFLLRSHP------LHPQHHHRHHQPPPPQP-----------PP

Query:  PPQKDLFTLHQTPNFQSAPSPTSSAFHTFTAQPP---------------------------PPKPDTAVA------PTLAPSDPPKESTQTKTKRRGGPG
        P  K  FTL     F  +        H F  QPP                           P +  ++V        +L+ +  PKES    TKR+GGPG
Subjt:  PPQKDLFTLHQTPNFQSAPSPTSSAFHTFTAQPP---------------------------PPKPDTAVA------PTLAPSDPPKESTQTKTKRRGGPG

Query:  GLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS-SSKKARVENESGIG
        GLNK+C VSPEL+ +VG+P LPRTEIV+QLWAYIRKNNLQDPSNKRKIIC+D LR+VFETDCTDMFKMNKLLAKHI+PL+P+K S  +KKA+ E E+   
Subjt:  GLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS-SSKKARVENESGIG

Query:  VKGAESS--ICPSVIISEALAKFFGVDGREMLQTEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
             SS  I  +V +SE L KFFG    EM   E++RR+WEYIK+N+LEDP+NPMA+ CD KL++L GCESISA+GI E+L R H++++S
Subjt:  VKGAESS--ICPSVIISEALAKFFGVDGREMLQTEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS

AT4G34290.1 SWIB/MDM2 domain superfamily protein2.4e-1440Show/hide
Query:  AVAPTLAPSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFE-TDCTDMFKMNKLL
        AV    A S  P  +T TKT+    P G+ K   VS  +Q +VG PE+PRT+ +K++WAYI++++LQDP NKR I+C+++L+ +FE  +     ++ KL+
Subjt:  AVAPTLAPSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFE-TDCTDMFKMNKLL

Query:  AKHII
          H +
Subjt:  AKHII


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTACAGACCAAGAGCTTTCTCAAGCTATTCAATGTCTTCTCCGCGACTCCGCTTCTGCTGCAAACCCTAGCGCTTTCTCCTCGCTAAACGCCGTCGTTCAGGAGCT
GGAGACCAAGCTCGGCCTCGACCTGTCTCACAAGGTCGATTTCATCCATGCCCAGATCCAATTCCTCCTCCGTTCTCACCCTTTACATCCTCAACACCACCACCGCCACC
ACCAACCACCGCCACCACAGCCGCCGCCGCCGCCGCAGAAAGATCTCTTTACCCTTCATCAAACCCCTAATTTCCAATCTGCCCCTTCCCCCACTTCCTCGGCTTTCCAT
ACTTTCACCGCTCAGCCGCCGCCGCCTAAGCCGGACACTGCCGTCGCTCCCACTCTTGCGCCTTCTGACCCGCCCAAGGAAAGTACCCAAACTAAAACTAAGAGAAGAGG
AGGCCCGGGGGGTCTAAACAAGCTCTGTGGTGTTTCTCCTGAACTTCAGGCTATTGTTGGGCAACCAGAATTGCCAAGAACTGAGATAGTGAAACAGCTATGGGCATACA
TCAGGAAAAACAACCTACAGGATCCGAGTAACAAAAGGAAAATAATATGCAATGATGAGTTGCGGTTGGTATTTGAAACAGACTGCACCGACATGTTCAAAATGAATAAG
TTGCTAGCCAAACACATCATCCCTCTTGAACCTACAAAACCATCAAGTTCTAAGAAGGCGCGAGTGGAGAATGAATCTGGAATTGGTGTAAAAGGTGCAGAATCTAGTAT
ATGTCCTTCTGTGATTATATCCGAAGCTCTTGCAAAATTTTTTGGTGTTGATGGAAGGGAGATGCTCCAAACAGAGGTTTTGAGAAGAATATGGGAGTACATAAAAGTCA
ATCATCTTGAGGACCCTCTAAACCCAATGGCGGTGTTGTGTGATGCAAAACTCCAAGAACTGTTTGGTTGCGAAAGCATTTCTGCTCTTGGAATCCCAGAAGTTTTAGGC
CGCCACCATATATTTAGGAGATCA
mRNA sequenceShow/hide mRNA sequence
ATGGTTACAGACCAAGAGCTTTCTCAAGCTATTCAATGTCTTCTCCGCGACTCCGCTTCTGCTGCAAACCCTAGCGCTTTCTCCTCGCTAAACGCCGTCGTTCAGGAGCT
GGAGACCAAGCTCGGCCTCGACCTGTCTCACAAGGTCGATTTCATCCATGCCCAGATCCAATTCCTCCTCCGTTCTCACCCTTTACATCCTCAACACCACCACCGCCACC
ACCAACCACCGCCACCACAGCCGCCGCCGCCGCCGCAGAAAGATCTCTTTACCCTTCATCAAACCCCTAATTTCCAATCTGCCCCTTCCCCCACTTCCTCGGCTTTCCAT
ACTTTCACCGCTCAGCCGCCGCCGCCTAAGCCGGACACTGCCGTCGCTCCCACTCTTGCGCCTTCTGACCCGCCCAAGGAAAGTACCCAAACTAAAACTAAGAGAAGAGG
AGGCCCGGGGGGTCTAAACAAGCTCTGTGGTGTTTCTCCTGAACTTCAGGCTATTGTTGGGCAACCAGAATTGCCAAGAACTGAGATAGTGAAACAGCTATGGGCATACA
TCAGGAAAAACAACCTACAGGATCCGAGTAACAAAAGGAAAATAATATGCAATGATGAGTTGCGGTTGGTATTTGAAACAGACTGCACCGACATGTTCAAAATGAATAAG
TTGCTAGCCAAACACATCATCCCTCTTGAACCTACAAAACCATCAAGTTCTAAGAAGGCGCGAGTGGAGAATGAATCTGGAATTGGTGTAAAAGGTGCAGAATCTAGTAT
ATGTCCTTCTGTGATTATATCCGAAGCTCTTGCAAAATTTTTTGGTGTTGATGGAAGGGAGATGCTCCAAACAGAGGTTTTGAGAAGAATATGGGAGTACATAAAAGTCA
ATCATCTTGAGGACCCTCTAAACCCAATGGCGGTGTTGTGTGATGCAAAACTCCAAGAACTGTTTGGTTGCGAAAGCATTTCTGCTCTTGGAATCCCAGAAGTTTTAGGC
CGCCACCATATATTTAGGAGATCA
Protein sequenceShow/hide protein sequence
MVTDQELSQAIQCLLRDSASAANPSAFSSLNAVVQELETKLGLDLSHKVDFIHAQIQFLLRSHPLHPQHHHRHHQPPPPQPPPPPQKDLFTLHQTPNFQSAPSPTSSAFH
TFTAQPPPPKPDTAVAPTLAPSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNK
LLAKHIIPLEPTKPSSSKKARVENESGIGVKGAESSICPSVIISEALAKFFGVDGREMLQTEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLG
RHHIFRRS