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MS008094 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008094
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzf-RVT domain-containing protein
Genome locationscaffold703:194662..194886
RNA-Seq ExpressionMS008094
SyntenyMS008094
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK06564.1 hypothetical protein E5676_scaffold453G00250 [Cucumis melo var. makuwa]1.4e-0941.33Show/hide
Query:  RCPWFNINTQWKLVEKYYSFKVGNGKRVLFWHHVWLGDSALKTRFPLLFRVSSTPLITVFEAWDQNTASWKIEIR
        + PW  I+   + +E   SFK+GNG R+ FW  VW+ +++ +T F +LFRVS  P  +V   WD +T SW I  R
Subjt:  RCPWFNINTQWKLVEKYYSFKVGNGKRVLFWHHVWLGDSALKTRFPLLFRVSSTPLITVFEAWDQNTASWKIEIR

TYK22579.1 hypothetical protein E5676_scaffold584G00340 [Cucumis melo var. makuwa]8.4e-1042.67Show/hide
Query:  RCPWFNINTQWKLVEKYYSFKVGNGKRVLFWHHVWLGDSALKTRFPLLFRVSSTPLITVFEAWDQNTASWKIEIR
        R PW +I+ +WK VE    FK+GNG+RV FW   W  +  LKT+   LF+++  P+ +V   WD +T SW I  R
Subjt:  RCPWFNINTQWKLVEKYYSFKVGNGKRVLFWHHVWLGDSALKTRFPLLFRVSSTPLITVFEAWDQNTASWKIEIR

XP_009599592.1 uncharacterized protein LOC104095219 [Nicotiana tomentosiformis]3.2e-0941.89Show/hide
Query:  CPWFNINTQWKLVEKYYSFKVGNGKRVLFWHHVWLGDSALKTRFPLLFRVSSTPLITVFEAWDQNTASWKIEIR
        C W  I  QW+ +  + S KVGNG+RVLFW   W G + L  +FP L+ +++ P I+V EA  ++T  W I  R
Subjt:  CPWFNINTQWKLVEKYYSFKVGNGKRVLFWHHVWLGDSALKTRFPLLFRVSSTPLITVFEAWDQNTASWKIEIR

XP_022155195.1 uncharacterized protein LOC111022333 [Momordica charantia]1.5e-1141.33Show/hide
Query:  RCPWFNINTQWKLVEKYYSFKVGNGKRVLFWHHVWLGDSALKTRFPLLFRVSSTPLITVFEAWDQNTASWKIEIR
        R PW NI+ QW    ++  FK+G+G  +LFW H W+ +  LK RF  ++++S+ P  +V E WD  T SW+I  R
Subjt:  RCPWFNINTQWKLVEKYYSFKVGNGKRVLFWHHVWLGDSALKTRFPLLFRVSSTPLITVFEAWDQNTASWKIEIR

XP_038903695.1 uncharacterized protein LOC120090219 [Benincasa hispida]1.4e-0941.33Show/hide
Query:  RCPWFNINTQWKLVEKYYSFKVGNGKRVLFWHHVWLGDSALKTRFPLLFRVSSTPLITVFEAWDQNTASWKIEIR
        + PW +I+  W  VE   +FK+GNG R+ FW   W G S     F  LFR+++ P  +V + WD N ASW I  R
Subjt:  RCPWFNINTQWKLVEKYYSFKVGNGKRVLFWHHVWLGDSALKTRFPLLFRVSSTPLITVFEAWDQNTASWKIEIR

TrEMBL top hitse value%identityAlignment
A0A2N9EP65 Reverse transcriptase domain-containing protein1.8e-1045.83Show/hide
Query:  WFNINTQWKLVEKYYSFKVGNGKRVLFWHHVWLGDSALKTRFPLLFRVSSTPLITVFE--AWDQNTASWKIE
        W +I   W    KY SFKVGNG R+ FWH  W GD  L+ +FP+LFR++     TV +   +  NT SW IE
Subjt:  WFNINTQWKLVEKYYSFKVGNGKRVLFWHHVWLGDSALKTRFPLLFRVSSTPLITVFE--AWDQNTASWKIE

A0A5D3C5F2 Uncharacterized protein6.9e-1041.33Show/hide
Query:  RCPWFNINTQWKLVEKYYSFKVGNGKRVLFWHHVWLGDSALKTRFPLLFRVSSTPLITVFEAWDQNTASWKIEIR
        + PW  I+   + +E   SFK+GNG R+ FW  VW+ +++ +T F +LFRVS  P  +V   WD +T SW I  R
Subjt:  RCPWFNINTQWKLVEKYYSFKVGNGKRVLFWHHVWLGDSALKTRFPLLFRVSSTPLITVFEAWDQNTASWKIEIR

A0A5D3CSP2 Uncharacterized protein2.0e-0942.67Show/hide
Query:  RCPWFNINTQWKLVEKYYSFKVGNGKRVLFWHHVWLGDSALKTRFPLLFRVSSTPLITVFEAWDQNTASWKIEIR
        R PW +I+ +W+ VE    FK+G G+RV FW   W G+  L+T+F   FR+S  P  +V   WD +T SW I  R
Subjt:  RCPWFNINTQWKLVEKYYSFKVGNGKRVLFWHHVWLGDSALKTRFPLLFRVSSTPLITVFEAWDQNTASWKIEIR

A0A5D3DH32 Uncharacterized protein4.1e-1042.67Show/hide
Query:  RCPWFNINTQWKLVEKYYSFKVGNGKRVLFWHHVWLGDSALKTRFPLLFRVSSTPLITVFEAWDQNTASWKIEIR
        R PW +I+ +WK VE    FK+GNG+RV FW   W  +  LKT+   LF+++  P+ +V   WD +T SW I  R
Subjt:  RCPWFNINTQWKLVEKYYSFKVGNGKRVLFWHHVWLGDSALKTRFPLLFRVSSTPLITVFEAWDQNTASWKIEIR

A0A6J1DLR8 uncharacterized protein LOC1110223337.4e-1241.33Show/hide
Query:  RCPWFNINTQWKLVEKYYSFKVGNGKRVLFWHHVWLGDSALKTRFPLLFRVSSTPLITVFEAWDQNTASWKIEIR
        R PW NI+ QW    ++  FK+G+G  +LFW H W+ +  LK RF  ++++S+ P  +V E WD  T SW+I  R
Subjt:  RCPWFNINTQWKLVEKYYSFKVGNGKRVLFWHHVWLGDSALKTRFPLLFRVSSTPLITVFEAWDQNTASWKIEIR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGCTGTCCATGGTTTAATATTAATACACAGTGGAAACTGGTGGAAAAGTACTACTCTTTCAAAGTTGGAAATGGGAAACGAGTTCTCTTTTGGCATCATGTATGGTTGGG
AGACTCAGCCTTAAAGACTCGATTTCCTTTGCTGTTTCGAGTCTCGTCTACCCCTCTTATTACTGTTTTTGAAGCGTGGGATCAAAATACAGCATCTTGGAAGATTGAAA
TCCGT
mRNA sequenceShow/hide mRNA sequence
CGCTGTCCATGGTTTAATATTAATACACAGTGGAAACTGGTGGAAAAGTACTACTCTTTCAAAGTTGGAAATGGGAAACGAGTTCTCTTTTGGCATCATGTATGGTTGGG
AGACTCAGCCTTAAAGACTCGATTTCCTTTGCTGTTTCGAGTCTCGTCTACCCCTCTTATTACTGTTTTTGAAGCGTGGGATCAAAATACAGCATCTTGGAAGATTGAAA
TCCGT
Protein sequenceShow/hide protein sequence
RCPWFNINTQWKLVEKYYSFKVGNGKRVLFWHHVWLGDSALKTRFPLLFRVSSTPLITVFEAWDQNTASWKIEIR