; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS008118 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008118
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCCR4-NOT transcription complex subunit 9-like
Genome locationscaffold703:341941..346475
RNA-Seq ExpressionMS008118
SyntenyMS008118
Gene Ontology termsGO:0017148 - negative regulation of translation (biological process)
GO:0000932 - P-body (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
InterPro domainsIPR011989 - Armadillo-like helical
IPR016024 - Armadillo-type fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139793.1 CCR4-NOT transcription complex subunit 9 [Cucumis sativus]1.1e-17096.55Show/hide
Query:  MSNLPQSISMNAPFGGPGPSIPSASGAPPTKERKMAFSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP
        M+NLPQS+SMNA FGGPGPSIP A+GAPP KERKMA SEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP
Subjt:  MSNLPQSISMNAPFGGPGPSIPSASGAPPTKERKMAFSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP

Query:  AQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATF
        AQSNRVCNALALLQCVASH DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATF
Subjt:  AQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATF

Query:  IVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQPSSRLLKHIIRCYLRLSDNPKACDALRNCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG
        IVQKILLDDVGLDYICTTAERFFAVGRVLG+MV ALAEQPSSRLLKHIIRCYLRLSDNPKACDALR+CLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG
Subjt:  IVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQPSSRLLKHIIRCYLRLSDNPKACDALRNCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG

Query:  MSRVPALQAGAGFDHMMVN
        MSRVPALQAGAGFDHMMVN
Subjt:  MSRVPALQAGAGFDHMMVN

XP_022139598.1 CCR4-NOT transcription complex subunit 9 isoform X1 [Momordica charantia]4.3e-17291.64Show/hide
Query:  MSNLPQSISMNAPFGGPGPSIPSASGAPPTKERKMAFSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP
        MSNLPQSISMNAPFGGPGPSIPSASGAPPTKERKMAFSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP
Subjt:  MSNLPQSISMNAPFGGPGPSIPSASGAPPTKERKMAFSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP

Query:  AQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK----------------------------VDDTEVIS
        AQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK                            VDDTEVIS
Subjt:  AQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK----------------------------VDDTEVIS

Query:  FLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQPSSRLLKHIIRCYLRLSDNPKACDALRNCLPDM
        FLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQPSSRLLKHIIRCYLRLSDNPKACDALRNCLPDM
Subjt:  FLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQPSSRLLKHIIRCYLRLSDNPKACDALRNCLPDM

Query:  LRDATFNSCLREDPTTRRWLQQLLHNVGMSRVPALQAGAGFDHMMVN
        LRD TFNSCLREDPTTRRWLQQLLHNVGMSRVPALQAGAGFDHMMVN
Subjt:  LRDATFNSCLREDPTTRRWLQQLLHNVGMSRVPALQAGAGFDHMMVN

XP_022139599.1 CCR4-NOT transcription complex subunit 9 isoform X2 [Momordica charantia]1.3e-17699.69Show/hide
Query:  MSNLPQSISMNAPFGGPGPSIPSASGAPPTKERKMAFSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP
        MSNLPQSISMNAPFGGPGPSIPSASGAPPTKERKMAFSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP
Subjt:  MSNLPQSISMNAPFGGPGPSIPSASGAPPTKERKMAFSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP

Query:  AQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATF
        AQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATF
Subjt:  AQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATF

Query:  IVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQPSSRLLKHIIRCYLRLSDNPKACDALRNCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG
        IVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQPSSRLLKHIIRCYLRLSDNPKACDALRNCLPDMLRD TFNSCLREDPTTRRWLQQLLHNVG
Subjt:  IVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQPSSRLLKHIIRCYLRLSDNPKACDALRNCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG

Query:  MSRVPALQAGAGFDHMMVN
        MSRVPALQAGAGFDHMMVN
Subjt:  MSRVPALQAGAGFDHMMVN

XP_022940835.1 CCR4-NOT transcription complex subunit 9-like [Cucurbita moschata]1.1e-16795.33Show/hide
Query:  MSNLPQSISMNAPFG--GPGPSIPSASGAPPTKERKMAFSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL
        MSNLPQS+SM+A FG  GPGPSIPSASGAPP KERKMA SEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL
Subjt:  MSNLPQSISMNAPFG--GPGPSIPSASGAPPTKERKMAFSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL

Query:  TPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVA
        TPAQSNRVCNALALLQCVASH DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVA
Subjt:  TPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVA

Query:  TFIVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQPSSRLLKHIIRCYLRLSDNPKACDALRNCLPDMLRDATFNSCLREDPTTRRWLQQLLHN
        TFIVQKILLDDVGLDYICTTAERFFAVGRVLG+MV AL+EQPSSRLLKHIIRCYLRLSDNPKACDALR+CLPDMLRDATFN CLR+D TTRRWLQQLLHN
Subjt:  TFIVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQPSSRLLKHIIRCYLRLSDNPKACDALRNCLPDMLRDATFNSCLREDPTTRRWLQQLLHN

Query:  VGMSRVPALQAGAGFDHMMVN
        VGMSRVPALQAGAGFDHMMVN
Subjt:  VGMSRVPALQAGAGFDHMMVN

XP_038898425.1 CCR4-NOT transcription complex subunit 9 isoform X1 [Benincasa hispida]1.4e-17096.55Show/hide
Query:  MSNLPQSISMNAPFGGPGPSIPSASGAPPTKERKMAFSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP
        M+NLPQS+SMNA FGGPGPSIP ASGAPP KERKMA SEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP
Subjt:  MSNLPQSISMNAPFGGPGPSIPSASGAPPTKERKMAFSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP

Query:  AQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATF
        AQSNRVCNALALLQCVASH DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATF
Subjt:  AQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATF

Query:  IVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQPSSRLLKHIIRCYLRLSDNPKACDALRNCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG
        IVQKILLDDVGLDYICTTAERFFAVGRVLG+MV ALAEQPSSRLLKHIIRCYLRLSDNPKACDALR+CLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG
Subjt:  IVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQPSSRLLKHIIRCYLRLSDNPKACDALRNCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG

Query:  MSRVPALQAGAGFDHMMVN
        MSRVP LQAGAGFDHMMVN
Subjt:  MSRVPALQAGAGFDHMMVN

TrEMBL top hitse value%identityAlignment
A0A0A0K791 Uncharacterized protein5.1e-17196.55Show/hide
Query:  MSNLPQSISMNAPFGGPGPSIPSASGAPPTKERKMAFSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP
        M+NLPQS+SMNA FGGPGPSIP A+GAPP KERKMA SEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP
Subjt:  MSNLPQSISMNAPFGGPGPSIPSASGAPPTKERKMAFSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP

Query:  AQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATF
        AQSNRVCNALALLQCVASH DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATF
Subjt:  AQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATF

Query:  IVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQPSSRLLKHIIRCYLRLSDNPKACDALRNCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG
        IVQKILLDDVGLDYICTTAERFFAVGRVLG+MV ALAEQPSSRLLKHIIRCYLRLSDNPKACDALR+CLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG
Subjt:  IVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQPSSRLLKHIIRCYLRLSDNPKACDALRNCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG

Query:  MSRVPALQAGAGFDHMMVN
        MSRVPALQAGAGFDHMMVN
Subjt:  MSRVPALQAGAGFDHMMVN

A0A1S3BI21 cell differentiation protein RCD1 homolog5.1e-17196.55Show/hide
Query:  MSNLPQSISMNAPFGGPGPSIPSASGAPPTKERKMAFSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP
        M+NLPQS+SMNA FGGPGPSIP A+GAPP KERKMA SEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP
Subjt:  MSNLPQSISMNAPFGGPGPSIPSASGAPPTKERKMAFSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP

Query:  AQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATF
        AQSNRVCNALALLQCVASH DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATF
Subjt:  AQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATF

Query:  IVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQPSSRLLKHIIRCYLRLSDNPKACDALRNCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG
        IVQKILLDDVGLDYICTTAERFFAVGRVLG+MV ALAEQPSSRLLKHIIRCYLRLSDNPKACDALR+CLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG
Subjt:  IVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQPSSRLLKHIIRCYLRLSDNPKACDALRNCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG

Query:  MSRVPALQAGAGFDHMMVN
        MSRVPALQAGAGFDHMMVN
Subjt:  MSRVPALQAGAGFDHMMVN

A0A5D3DHI4 Cell differentiation protein RCD1-like protein isoform X25.1e-17196.55Show/hide
Query:  MSNLPQSISMNAPFGGPGPSIPSASGAPPTKERKMAFSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP
        M+NLPQS+SMNA FGGPGPSIP A+GAPP KERKMA SEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP
Subjt:  MSNLPQSISMNAPFGGPGPSIPSASGAPPTKERKMAFSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP

Query:  AQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATF
        AQSNRVCNALALLQCVASH DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATF
Subjt:  AQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATF

Query:  IVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQPSSRLLKHIIRCYLRLSDNPKACDALRNCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG
        IVQKILLDDVGLDYICTTAERFFAVGRVLG+MV ALAEQPSSRLLKHIIRCYLRLSDNPKACDALR+CLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG
Subjt:  IVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQPSSRLLKHIIRCYLRLSDNPKACDALRNCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG

Query:  MSRVPALQAGAGFDHMMVN
        MSRVPALQAGAGFDHMMVN
Subjt:  MSRVPALQAGAGFDHMMVN

A0A6J1CDH6 CCR4-NOT transcription complex subunit 9 isoform X26.2e-17799.69Show/hide
Query:  MSNLPQSISMNAPFGGPGPSIPSASGAPPTKERKMAFSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP
        MSNLPQSISMNAPFGGPGPSIPSASGAPPTKERKMAFSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP
Subjt:  MSNLPQSISMNAPFGGPGPSIPSASGAPPTKERKMAFSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP

Query:  AQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATF
        AQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATF
Subjt:  AQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATF

Query:  IVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQPSSRLLKHIIRCYLRLSDNPKACDALRNCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG
        IVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQPSSRLLKHIIRCYLRLSDNPKACDALRNCLPDMLRD TFNSCLREDPTTRRWLQQLLHNVG
Subjt:  IVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQPSSRLLKHIIRCYLRLSDNPKACDALRNCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG

Query:  MSRVPALQAGAGFDHMMVN
        MSRVPALQAGAGFDHMMVN
Subjt:  MSRVPALQAGAGFDHMMVN

A0A6J1CG06 CCR4-NOT transcription complex subunit 9 isoform X12.1e-17291.64Show/hide
Query:  MSNLPQSISMNAPFGGPGPSIPSASGAPPTKERKMAFSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP
        MSNLPQSISMNAPFGGPGPSIPSASGAPPTKERKMAFSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP
Subjt:  MSNLPQSISMNAPFGGPGPSIPSASGAPPTKERKMAFSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP

Query:  AQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK----------------------------VDDTEVIS
        AQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK                            VDDTEVIS
Subjt:  AQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVK----------------------------VDDTEVIS

Query:  FLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQPSSRLLKHIIRCYLRLSDNPKACDALRNCLPDM
        FLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQPSSRLLKHIIRCYLRLSDNPKACDALRNCLPDM
Subjt:  FLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQPSSRLLKHIIRCYLRLSDNPKACDALRNCLPDM

Query:  LRDATFNSCLREDPTTRRWLQQLLHNVGMSRVPALQAGAGFDHMMVN
        LRD TFNSCLREDPTTRRWLQQLLHNVGMSRVPALQAGAGFDHMMVN
Subjt:  LRDATFNSCLREDPTTRRWLQQLLHNVGMSRVPALQAGAGFDHMMVN

SwissProt top hitse value%identityAlignment
A7MB47 CCR4-NOT transcription complex subunit 91.0e-10471.7Show/hide
Query:  QLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFL
        Q + +LS+P+ RENALLELSKKRE   DLAP+LW+SFGTIAALLQEIV+IYP ++PP LT  QSNRVCNALALLQCVASHP+TR  FL AHIPL+LYPFL
Subjt:  QLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFL

Query:  NTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQ
        +T SK+RPFEYLRLTSLGVIGALVK D+ EVI+FLL+TEIIPLCLR ME GSELSKTVATFI+QKILLDD GL YIC T ERF  V  +LG MV  L+++
Subjt:  NTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQ

Query:  PSSRLLKHIIRCYLRLSDNPKACDALRNCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVGMSRV
        PS+RLLKH++RCYLRLSDNP+A +ALR CLPD L+D TF   L++D TT+RWL QL+ N+   +V
Subjt:  PSSRLLKHIIRCYLRLSDNPKACDALRNCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVGMSRV

Q4R347 CCR4-NOT transcription complex subunit 91.0e-10471.7Show/hide
Query:  QLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFL
        Q + +LS+P+ RENALLELSKKRE   DLAP+LW+SFGTIAALLQEIV+IYP ++PP LT  QSNRVCNALALLQCVASHP+TR  FL AHIPL+LYPFL
Subjt:  QLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFL

Query:  NTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQ
        +T SK+RPFEYLRLTSLGVIGALVK D+ EVI+FLL+TEIIPLCLR ME GSELSKTVATFI+QKILLDD GL YIC T ERF  V  +LG MV  L+++
Subjt:  NTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQ

Query:  PSSRLLKHIIRCYLRLSDNPKACDALRNCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVGMSRV
        PS+RLLKH++RCYLRLSDNP+A +ALR CLPD L+D TF   L++D TT+RWL QL+ N+   +V
Subjt:  PSSRLLKHIIRCYLRLSDNPKACDALRNCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVGMSRV

Q6IP65 CCR4-NOT transcription complex subunit 93.6e-10572.08Show/hide
Query:  QLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFL
        Q + +LS+PD RENALLELSKKRE   DLAP+LW+SFGTIAALLQEIV+IYP ++PP LT  QSNRVCNALALLQCVASHP+TR  FL AHIPL+LYPFL
Subjt:  QLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFL

Query:  NTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQ
        +T SK+RPFEYLRLTSLGVIGALVK D+ EVI+FLL+TEIIPLCLR ME GSELSKTVATFI+QKILLDD GL YIC T ERF  V  +LG MV  L+++
Subjt:  NTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQ

Query:  PSSRLLKHIIRCYLRLSDNPKACDALRNCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVGMSRV
        PS+RLLKH++RCYLRLSDNP+A +ALR CLPD L+D TF   L++D TT+RWL QL+ N+   +V
Subjt:  PSSRLLKHIIRCYLRLSDNPKACDALRNCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVGMSRV

Q6P819 CCR4-NOT transcription complex subunit 93.6e-10572.08Show/hide
Query:  QLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFL
        Q + +LS+PD RENALLELSKKRE   DLAP+LW+SFGTIAALLQEIV+IYP ++PP LT  QSNRVCNALALLQCVASHP+TR  FL AHIPL+LYPFL
Subjt:  QLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFL

Query:  NTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQ
        +T SK+RPFEYLRLTSLGVIGALVK D+ EVI+FLL+TEIIPLCLR ME GSELSKTVATFI+QKILLDD GL YIC T ERF  V  +LG MV  L+++
Subjt:  NTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQ

Query:  PSSRLLKHIIRCYLRLSDNPKACDALRNCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVGMSRV
        PS+RLLKH++RCYLRLSDNP+A +ALR CLPD L+D TF   L++D TT+RWL QL+ N+   +V
Subjt:  PSSRLLKHIIRCYLRLSDNPKACDALRNCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVGMSRV

Q92600 CCR4-NOT transcription complex subunit 91.0e-10471.7Show/hide
Query:  QLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFL
        Q + +LS+P+ RENALLELSKKRE   DLAP+LW+SFGTIAALLQEIV+IYP ++PP LT  QSNRVCNALALLQCVASHP+TR  FL AHIPL+LYPFL
Subjt:  QLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFL

Query:  NTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQ
        +T SK+RPFEYLRLTSLGVIGALVK D+ EVI+FLL+TEIIPLCLR ME GSELSKTVATFI+QKILLDD GL YIC T ERF  V  +LG MV  L+++
Subjt:  NTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQ

Query:  PSSRLLKHIIRCYLRLSDNPKACDALRNCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVGMSRV
        PS+RLLKH++RCYLRLSDNP+A +ALR CLPD L+D TF   L++D TT+RWL QL+ N+   +V
Subjt:  PSSRLLKHIIRCYLRLSDNPKACDALRNCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVGMSRV

Arabidopsis top hitse value%identityAlignment
AT2G32550.1 Cell differentiation, Rcd1-like protein6.9e-3533.54Show/hide
Query:  MSNLPQSISMN-APFGGPGPS-IPSASGAPPTKERKMAFSE-----QLVLDLSNPD--LRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYP
        M NLP S+  + +      PS   S+S APP +   +A        Q V D+  P   + + AL  L+  R  F+ L  LLW S  T+  +LQE+   Y 
Subjt:  MSNLPQSISMN-APFGGPGPS-IPSASGAPPTKERKMAFSE-----QLVLDLSNPD--LRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYP

Query:  VLS--------PPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKV-DDTEVISFLLSTEIIPL
         L+        P  L P    RV N   L Q +A HPDT   FL A +P Y YP ++T    +  E +RL +LGVI  ++K  +D  V  +L+ + ++  
Subjt:  VLS--------PPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKV-DDTEVISFLLSTEIIPL

Query:  CLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAE--QPSSRLLKHIIRCYLRLSDNPKACDALRNCLPDMLRDATFNS
        C++ +E GS  +K VA +I+ KI+  D GL Y C  A+RF+ +  +L  ++  L+   +P S L   +  CY++LS N +A + +R   P +L D TF+ 
Subjt:  CLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAE--QPSSRLLKHIIRCYLRLSDNPKACDALRNCLPDMLRDATFNS

Query:  CLREDPTTRRWLQQLLHNV
           EDP       QLL N+
Subjt:  CLREDPTTRRWLQQLLHNV

AT3G20800.1 Cell differentiation, Rcd1-like protein4.5e-15184.23Show/hide
Query:  MSNLPQSISMNAPFGGPGPSIPSASGAPPTKERKMAFSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP
        M+NLP S+SM  PFGGP  S  + +GAP  K+R +A +EQLVLDLSNP+LRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIY VL+PPNLTP
Subjt:  MSNLPQSISMNAPFGGPGPSIPSASGAPPTKERKMAFSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP

Query:  AQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATF
        AQSNRVCN+LALLQCVASH DTRMLFL AHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATF
Subjt:  AQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATF

Query:  IVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQPSSRLLKHIIRCYLRLSDNPKACDALRNCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG
        IVQKILLDDVG+DYICTTAERFFAVGRVLG+MV +L EQPS RLLKHIIRCYLRLSDNP+AC AL +CLPD LRD +F++CLREDPT RRWLQQL+HNVG
Subjt:  IVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQPSSRLLKHIIRCYLRLSDNPKACDALRNCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG

Query:  MSRVPALQAGAGFDHMM
        + RVP  Q G GF+HM+
Subjt:  MSRVPALQAGAGFDHMM

AT5G12980.1 Cell differentiation, Rcd1-like protein1.9e-13073.98Show/hide
Query:  MSNLPQSISMNAPFGGPGPSIPSASGAPPTKERKMAFSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP
        M+NLP  +SM +     G S PS+S      +RK++ +EQL+LDLSNP+LRENAL ELSKKRE+FQDLAPLLW+S GTI ALLQEI+++YP LSPP +TP
Subjt:  MSNLPQSISMNAPFGGPGPSIPSASGAPPTKERKMAFSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTP

Query:  AQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATF
        AQSNRVCNALALLQCVASH DTRMLFL AH+PLYLY FLNT+SKSRPFEYLRLTSLGVIGALVKVDDTEVI FLL TEI+PLCLRTME GSELSKTVATF
Subjt:  AQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATF

Query:  IVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQPSSRLLKHIIRCYLRLSDNPKACDALRNCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG
        IVQK+LLDDVGL+Y+CTTAERFFA+GRVLG+MV +LAE PS+RLLKHIIRCYLRL+DNP+ACDAL +CLPD+LRDATF+ CL +DP   +WLQQLLHNV 
Subjt:  IVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQPSSRLLKHIIRCYLRLSDNPKACDALRNCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVG

Query:  MSRVPALQAGAGFDHMMVN
        +      +A  G  HM VN
Subjt:  MSRVPALQAGAGFDHMMVN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAATCTCCCTCAATCCATCTCCATGAATGCTCCGTTTGGAGGTCCGGGTCCGTCCATCCCCAGTGCCTCCGGAGCTCCACCCACCAAAGAGCGGAAAATGGCTTT
TTCGGAGCAGTTGGTGCTCGACCTCAGCAATCCGGATCTTCGGGAGAACGCTCTCCTCGAACTCTCCAAGAAGAGGGAATTGTTTCAAGATTTGGCCCCATTGTTGTGGA
ACTCTTTTGGAACCATTGCTGCCTTATTGCAAGAGATTGTATCAATATATCCTGTTCTTTCACCCCCAAATCTTACCCCTGCGCAGTCAAATAGAGTTTGCAATGCTCTT
GCTCTTCTCCAGTGTGTAGCTTCTCACCCAGATACAAGGATGTTGTTTCTCAACGCTCACATACCATTGTATTTGTATCCTTTCCTTAACACAACTAGCAAGTCAAGGCC
TTTTGAGTACTTGCGGCTTACTAGCTTAGGTGTCATTGGTGCATTGGTGAAGGTAGATGATACAGAAGTAATAAGTTTTCTTCTGTCAACTGAAATAATTCCTTTATGCC
TGCGTACTATGGAAATGGGAAGCGAGTTGTCAAAAACAGTTGCAACATTTATTGTGCAGAAAATTTTGCTGGATGATGTGGGGTTGGATTATATTTGTACTACAGCTGAG
CGATTTTTTGCAGTTGGTCGAGTCCTAGGGAGTATGGTTGGAGCTCTTGCTGAACAACCCTCCTCTCGTCTATTGAAACACATAATTCGATGCTATCTTCGATTGTCCGA
TAATCCAAAGGCTTGTGATGCCTTAAGGAACTGTCTTCCAGACATGTTGCGAGACGCTACTTTCAATAGCTGCCTTCGGGAGGATCCAACCACAAGGAGGTGGCTGCAAC
AGTTGCTACACAATGTAGGAATGAGTAGGGTTCCAGCACTTCAGGCAGGAGCTGGATTTGATCATATGATGGTGAAC
mRNA sequenceShow/hide mRNA sequence
ATGTCGAATCTCCCTCAATCCATCTCCATGAATGCTCCGTTTGGAGGTCCGGGTCCGTCCATCCCCAGTGCCTCCGGAGCTCCACCCACCAAAGAGCGGAAAATGGCTTT
TTCGGAGCAGTTGGTGCTCGACCTCAGCAATCCGGATCTTCGGGAGAACGCTCTCCTCGAACTCTCCAAGAAGAGGGAATTGTTTCAAGATTTGGCCCCATTGTTGTGGA
ACTCTTTTGGAACCATTGCTGCCTTATTGCAAGAGATTGTATCAATATATCCTGTTCTTTCACCCCCAAATCTTACCCCTGCGCAGTCAAATAGAGTTTGCAATGCTCTT
GCTCTTCTCCAGTGTGTAGCTTCTCACCCAGATACAAGGATGTTGTTTCTCAACGCTCACATACCATTGTATTTGTATCCTTTCCTTAACACAACTAGCAAGTCAAGGCC
TTTTGAGTACTTGCGGCTTACTAGCTTAGGTGTCATTGGTGCATTGGTGAAGGTAGATGATACAGAAGTAATAAGTTTTCTTCTGTCAACTGAAATAATTCCTTTATGCC
TGCGTACTATGGAAATGGGAAGCGAGTTGTCAAAAACAGTTGCAACATTTATTGTGCAGAAAATTTTGCTGGATGATGTGGGGTTGGATTATATTTGTACTACAGCTGAG
CGATTTTTTGCAGTTGGTCGAGTCCTAGGGAGTATGGTTGGAGCTCTTGCTGAACAACCCTCCTCTCGTCTATTGAAACACATAATTCGATGCTATCTTCGATTGTCCGA
TAATCCAAAGGCTTGTGATGCCTTAAGGAACTGTCTTCCAGACATGTTGCGAGACGCTACTTTCAATAGCTGCCTTCGGGAGGATCCAACCACAAGGAGGTGGCTGCAAC
AGTTGCTACACAATGTAGGAATGAGTAGGGTTCCAGCACTTCAGGCAGGAGCTGGATTTGATCATATGATGGTGAAC
Protein sequenceShow/hide protein sequence
MSNLPQSISMNAPFGGPGPSIPSASGAPPTKERKMAFSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNAL
ALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAE
RFFAVGRVLGSMVGALAEQPSSRLLKHIIRCYLRLSDNPKACDALRNCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVGMSRVPALQAGAGFDHMMVN