; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS008130 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008130
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein of unknown function, DUF584
Genome locationscaffold703:472552..473112
RNA-Seq ExpressionMS008130
SyntenyMS008130
Gene Ontology termsNA
InterPro domainsIPR007608 - Senescence regulator S40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592046.1 hypothetical protein SDJN03_14392, partial [Cucurbita argyrosperma subsp. sororia]5.1e-6475.53Show/hide
Query:  MDGGGHGLSRQSSALWRSFRNGDFEEEDVWDVLKEKSTTTNSKSSDDSKFFTDSSIVASVSAANHFPSASRMIPRPNGSGNFQITPRSAPRSIPQWFTPN
        M GG +G+SRQSSALWRSFRNGDFEEEDVW+VLKEKS TT SK+SDDS FF+DS IV S S  +  PSASRMIPR NG GN QI  RSAPRSIPQWF PN
Subjt:  MDGGGHGLSRQSSALWRSFRNGDFEEEDVWDVLKEKSTTTNSKSSDDSKFFTDSSIVASVSAANHFPSASRMIPRPNGSGNFQITPRSAPRSIPQWFTPN

Query:  GNKNPRKSVPEHDDDGGGG--DDDGDSEDEDEEGFDCRVPPHELIAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLTKTGFLES
        G+KNPR    EHDD    G   D GDS   D+EGFD R+PPHELIAKR ARAQISSFSVFEG+GRTLKGRDLSKVRNAVL KTGFLES
Subjt:  GNKNPRKSVPEHDDDGGGG--DDDGDSEDEDEEGFDCRVPPHELIAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLTKTGFLES

KAG7024924.1 hypothetical protein SDJN02_13744, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-6375Show/hide
Query:  MDGGGHGLSRQSSALWRSFRNGDFEEEDVWDVLKEKSTTTNSKSSDDSKFFTDSSIVASVSAANHFPSASRMIPRPNGSGNFQITPRSAPRSIPQWFTPN
        M GG +G+SRQSSALWRSFRNGDFEEEDVW+VLKEKS TT SK+SDDS FF+DS I+ S S  +  PSASRMIPR NG GN QI  RSAPRSIPQWF PN
Subjt:  MDGGGHGLSRQSSALWRSFRNGDFEEEDVWDVLKEKSTTTNSKSSDDSKFFTDSSIVASVSAANHFPSASRMIPRPNGSGNFQITPRSAPRSIPQWFTPN

Query:  GNKNPRKSVPEHDDDGGGG--DDDGDSEDEDEEGFDCRVPPHELIAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLTKTGFLES
        G+KNPR    EHDD    G   D GDS   D+EGFD R+PPHELIAKR ARAQISSFSVFEG+GRTLKGRDLSKVRNAVL KTGFLES
Subjt:  GNKNPRKSVPEHDDDGGGG--DDDGDSEDEDEEGFDCRVPPHELIAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLTKTGFLES

XP_022139627.1 uncharacterized protein LOC111010482 [Momordica charantia]3.3e-9597.86Show/hide
Query:  MDGGGHGLSRQSSALWRSFRNGDFEEEDVWDVLKEKSTTTNSKSSDDSKFFTDSSIVASVSAANHFPSASRMIPRPNGSGNFQITPRSAPRSIPQWFTPN
        M+GGGHGLSRQSSALWRSFRNGDFEEEDVWDVLKEKSTTTNSKSSDDSKFFTDSSIVASVSAANHFPSA  MIPRPNGSGNFQI PRSAPRSIPQWFTPN
Subjt:  MDGGGHGLSRQSSALWRSFRNGDFEEEDVWDVLKEKSTTTNSKSSDDSKFFTDSSIVASVSAANHFPSASRMIPRPNGSGNFQITPRSAPRSIPQWFTPN

Query:  GNKNPRKSVPEHDDDGGGGDDDGDSEDEDEEGFDCRVPPHELIAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLTKTGFLESL
        GNKNPRKSVPEHDDDGGGGDDDGDSEDEDEEGFDCRVPPHELIAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLTKTGFLESL
Subjt:  GNKNPRKSVPEHDDDGGGGDDDGDSEDEDEEGFDCRVPPHELIAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLTKTGFLESL

XP_022936189.1 uncharacterized protein LOC111442861 [Cucurbita moschata]2.8e-6274.73Show/hide
Query:  MDGGGHGLSRQSSALWRSFRNGDFEEEDVWDVLKEKSTTTNSKSSDDSKFFTDSSIVASVSAANHFPSASRMIPRPNGSGNFQITPRSAPRSIPQWFTPN
        M GG +G SRQSSALWRSFRNGDFEEEDVW+VLKEKS TT SK+SDDS FF+DS I+ S S  +  PSASRMIPR NG GN QI  RSAPRSIPQWF PN
Subjt:  MDGGGHGLSRQSSALWRSFRNGDFEEEDVWDVLKEKSTTTNSKSSDDSKFFTDSSIVASVSAANHFPSASRMIPRPNGSGNFQITPRSAPRSIPQWFTPN

Query:  GNKNPRKSVPEHDDDGGGGDDDGDSEDEDEEGFDCRVPPHELIAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLTKTGFLES
        G KN R    EHDD    G    D +DEDEEGFD R+PPHELIAKR ARAQISSFSVFEG+GRTLKGRDLS+VRNAVL KTGFLES
Subjt:  GNKNPRKSVPEHDDDGGGGDDDGDSEDEDEEGFDCRVPPHELIAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLTKTGFLES

XP_023536166.1 uncharacterized protein LOC111797411 [Cucurbita pepo subsp. pepo]1.2e-6273.66Show/hide
Query:  MDGGGHGLSRQSSALWRSFRNGDFEEEDVWDVLKEKSTTTNSKSSDDSKFFTDSSIVASVSAANHFPSASRMIPRPNGSGNFQITPRSAPRSIPQWFTPN
        M GG +G+SRQSS LWRSFRNGDFEEEDVW+VLKEKS  T SK+SDDS FF+DSSI+ + S  +  PSASRMIPR NG GN QI  RSAPRSIPQWF PN
Subjt:  MDGGGHGLSRQSSALWRSFRNGDFEEEDVWDVLKEKSTTTNSKSSDDSKFFTDSSIVASVSAANHFPSASRMIPRPNGSGNFQITPRSAPRSIPQWFTPN

Query:  GNKNPRKSVPEHDDDGGGGDDDGDSEDEDEEGFDCRVPPHELIAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLTKTGFLES
        G+ NPR    EHDD    G    D ++EDEEGFD R+PPHELIAKR ARAQISSFSVFEG+GRTLKGRDLSKVRNAVL KTGFLES
Subjt:  GNKNPRKSVPEHDDDGGGGDDDGDSEDEDEEGFDCRVPPHELIAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLTKTGFLES

TrEMBL top hitse value%identityAlignment
A0A0A0K3A6 Uncharacterized protein1.7e-4463.27Show/hide
Query:  MDGGGHGLSRQSSALWRSFRNGDFEEEDVWDVLKEKSTTTNSKSSDDSKFFTDSSIVASVSAANHFPSASRMIPRPNGSGNFQITPRSAPRSIPQWFTPN
        MDGG   L   ++ALWRSFRNGDFEEEDVW+VL EKS TT+  SS    F TDSSI+ S       PSASRMIPRPNG    QI       SIPQW    
Subjt:  MDGGGHGLSRQSSALWRSFRNGDFEEEDVWDVLKEKSTTTNSKSSDDSKFFTDSSIVASVSAANHFPSASRMIPRPNGSGNFQITPRSAPRSIPQWFTPN

Query:  GNKNPRKSV----PEHDDDG---GGG--DDDGDSEDEDEEGFDCRVPPHELIAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLTKTGFLESL
          KNPR        E D+DG   GGG  +++ + E+E+EEG   RVPPHELIAKRLARAQISSFSVFEG GRTLKGRDLSKVRNAVLTKTGFLESL
Subjt:  GNKNPRKSV----PEHDDDG---GGG--DDDGDSEDEDEEGFDCRVPPHELIAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLTKTGFLESL

A0A6J1CEH3 uncharacterized protein LOC1110104821.6e-9597.86Show/hide
Query:  MDGGGHGLSRQSSALWRSFRNGDFEEEDVWDVLKEKSTTTNSKSSDDSKFFTDSSIVASVSAANHFPSASRMIPRPNGSGNFQITPRSAPRSIPQWFTPN
        M+GGGHGLSRQSSALWRSFRNGDFEEEDVWDVLKEKSTTTNSKSSDDSKFFTDSSIVASVSAANHFPSA  MIPRPNGSGNFQI PRSAPRSIPQWFTPN
Subjt:  MDGGGHGLSRQSSALWRSFRNGDFEEEDVWDVLKEKSTTTNSKSSDDSKFFTDSSIVASVSAANHFPSASRMIPRPNGSGNFQITPRSAPRSIPQWFTPN

Query:  GNKNPRKSVPEHDDDGGGGDDDGDSEDEDEEGFDCRVPPHELIAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLTKTGFLESL
        GNKNPRKSVPEHDDDGGGGDDDGDSEDEDEEGFDCRVPPHELIAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLTKTGFLESL
Subjt:  GNKNPRKSVPEHDDDGGGGDDDGDSEDEDEEGFDCRVPPHELIAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLTKTGFLESL

A0A6J1F7L6 uncharacterized protein LOC1114428611.3e-6274.73Show/hide
Query:  MDGGGHGLSRQSSALWRSFRNGDFEEEDVWDVLKEKSTTTNSKSSDDSKFFTDSSIVASVSAANHFPSASRMIPRPNGSGNFQITPRSAPRSIPQWFTPN
        M GG +G SRQSSALWRSFRNGDFEEEDVW+VLKEKS TT SK+SDDS FF+DS I+ S S  +  PSASRMIPR NG GN QI  RSAPRSIPQWF PN
Subjt:  MDGGGHGLSRQSSALWRSFRNGDFEEEDVWDVLKEKSTTTNSKSSDDSKFFTDSSIVASVSAANHFPSASRMIPRPNGSGNFQITPRSAPRSIPQWFTPN

Query:  GNKNPRKSVPEHDDDGGGGDDDGDSEDEDEEGFDCRVPPHELIAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLTKTGFLES
        G KN R    EHDD    G    D +DEDEEGFD R+PPHELIAKR ARAQISSFSVFEG+GRTLKGRDLS+VRNAVL KTGFLES
Subjt:  GNKNPRKSVPEHDDDGGGGDDDGDSEDEDEEGFDCRVPPHELIAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLTKTGFLES

A0A6J1FSC1 uncharacterized protein LOC1114464243.5e-5570.05Show/hide
Query:  MDGGGHGLSRQSSALWRSFRNGDFEEEDVWDVLKEKSTTTNSKSSDDSKFFTDSSIVASVSAANHFPSASRMIPRPNGSGNFQITPRSAPRSIPQWFTPN
        M GG +GL  QSSALWRSFRNGDFEEEDVW+VL+EKS T  S SSDD  FF DSSI  SV       SAS MIPR NG GN +I P+SAPRSIP+WF PN
Subjt:  MDGGGHGLSRQSSALWRSFRNGDFEEEDVWDVLKEKSTTTNSKSSDDSKFFTDSSIVASVSAANHFPSASRMIPRPNGSGNFQITPRSAPRSIPQWFTPN

Query:  GNKNPRKSVPEHDDDGGGGDDDGDSEDEDEEGFDCRVPPHELIAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLTKTGFLESL
        G++ P K     D D G  D+  + E+E+EEGF+ RVPPHELIAKRL RAQISSFSV EGVGRTLKGRDLSKVRNAVLTKTGFLESL
Subjt:  GNKNPRKSVPEHDDDGGGGDDDGDSEDEDEEGFDCRVPPHELIAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLTKTGFLESL

A0A6J1IX28 uncharacterized protein LOC1114806852.8e-5267.91Show/hide
Query:  MDGGGHGLSRQSSALWRSFRNGDFEEEDVWDVLKEKSTTTNSKSSDDSKFFTDSSIVASVSAANHFPSASRMIPRPNGSGNFQITPRSAPRSIPQWFTPN
        M GG +GL  QSSALWRSFRNGDFEEEDVW+VL+EKS T    SSDD  FF DSSI  SVSA         MIPR NG GN +I P+SAPRSIP+WF PN
Subjt:  MDGGGHGLSRQSSALWRSFRNGDFEEEDVWDVLKEKSTTTNSKSSDDSKFFTDSSIVASVSAANHFPSASRMIPRPNGSGNFQITPRSAPRSIPQWFTPN

Query:  GNKNPRKSVPEHDDDGGGGDDDGDSEDEDEEGFDCRVPPHELIAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLTKTGFLESL
        G++ P K     + D G  D+  + E+E+EEG + RVPPHELIAKRL RAQISSFSV EGVGRTLKGRDLSKVRNAVLTKTGFLESL
Subjt:  GNKNPRKSVPEHDDDGGGGDDDGDSEDEDEEGFDCRVPPHELIAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLTKTGFLESL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G45210.1 Protein of unknown function, DUF5843.0e-1446.94Show/hide
Query:  SAPRSIPQWFTPNGNKNPRKSVPEHDDDGGGGDDDGDSEDEDEEGFDCRVPPHELIAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLTKTGFLE
        S P ++  W    G +N RKS+ E+DDDGG G                ++PPHE +AK     +++SFSV EG+GRTLKGRD+S+VRNA+L KTGFL+
Subjt:  SAPRSIPQWFTPNGNKNPRKSVPEHDDDGGGGDDDGDSEDEDEEGFDCRVPPHELIAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLTKTGFLE

AT4G04630.1 Protein of unknown function, DUF5849.3e-2446.95Show/hide
Query:  DFEEEDVWDVLKEKSTTTNSKSSDDSKFFTDSSIVASVSAANHFPSASRMIPRPNGSGNFQITPRSAPRSIPQWFTPNG-NKNPRKSVPEHDDDGGGGDD
        +F+EEDVW VL+E  T++       S F + SS  +S       P   R     +G     +   SAP ++P W    G +K+ R+S   H       DD
Subjt:  DFEEEDVWDVLKEKSTTTNSKSSDDSKFFTDSSIVASVSAANHFPSASRMIPRPNGSGNFQITPRSAPRSIPQWFTPNG-NKNPRKSVPEHDDDGGGGDD

Query:  DGDSEDEDEEGFDCRVPPHELIAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLTKTGFLE
        D    DED++G  C VPPHE +A++LAR QISSFS+ EGVGRTLKGRDLSKVRNAVL+KTGFLE
Subjt:  DGDSEDEDEEGFDCRVPPHELIAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLTKTGFLE

AT4G21970.1 Protein of unknown function, DUF5842.7e-2346.39Show/hide
Query:  DFEEEDVWDVLKEKSTT-TNSKSSDDSKFFTDSSIVASVSAANHFPSASRMIPRPNG-SGNFQITPRSAPRSIPQWFTPNGNKNPRKSVPEHDDDGGGGD
        +F+EE+VW VL+E  T     K S  +  F+ SS            S++R IP+ N  SG  +    SAP +IP W    G      S   H        
Subjt:  DFEEEDVWDVLKEKSTT-TNSKSSDDSKFFTDSSIVASVSAANHFPSASRMIPRPNG-SGNFQITPRSAPRSIPQWFTPNGNKNPRKSVPEHDDDGGGGD

Query:  DDGDSEDEDEEGFDCRVPPHELIAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLTKTGFLES
            + D+D+EG    VPPHEL+AKRLAR QISSFS+ EG+GRTLKGRDLSK RNAVLT+TGFLES
Subjt:  DDGDSEDEDEEGFDCRVPPHELIAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLTKTGFLES

AT4G26950.1 Protein of unknown function, DUF5845.7e-1337.35Show/hide
Query:  NGDFEEEDVWDVLKEKSTTTNSKSSDDSKFFTDSSIVASVSAANHFPSASRMIP-RPNGSGNFQITPRSAPRSIPQWFTPNGNKNPRKSVPEHDDDGGGG
        +GDF+E+DVWDVL    +     S+  +K         S S     PS  RMIP R    G   +  +S P ++P W      K  +K V          
Subjt:  NGDFEEEDVWDVLKEKSTTTNSKSSDDSKFFTDSSIVASVSAANHFPSASRMIP-RPNGSGNFQITPRSAPRSIPQWFTPNGNKNPRKSVPEHDDDGGGG

Query:  DDDGDSEDEDEEGFDCRVPPHELIAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLTKTGFLE
        DD+              V P E   +R   +  SS SV EGVGR LKGRDLSKVRNA+L +TGFLE
Subjt:  DDDGDSEDEDEEGFDCRVPPHELIAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLTKTGFLE

AT4G26950.2 Protein of unknown function, DUF5845.7e-1337.35Show/hide
Query:  NGDFEEEDVWDVLKEKSTTTNSKSSDDSKFFTDSSIVASVSAANHFPSASRMIP-RPNGSGNFQITPRSAPRSIPQWFTPNGNKNPRKSVPEHDDDGGGG
        +GDF+E+DVWDVL    +     S+  +K         S S     PS  RMIP R    G   +  +S P ++P W      K  +K V          
Subjt:  NGDFEEEDVWDVLKEKSTTTNSKSSDDSKFFTDSSIVASVSAANHFPSASRMIP-RPNGSGNFQITPRSAPRSIPQWFTPNGNKNPRKSVPEHDDDGGGG

Query:  DDDGDSEDEDEEGFDCRVPPHELIAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLTKTGFLE
        DD+              V P E   +R   +  SS SV EGVGR LKGRDLSKVRNA+L +TGFLE
Subjt:  DDDGDSEDEDEEGFDCRVPPHELIAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLTKTGFLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGGCGGCGGACATGGACTGAGCAGGCAGAGCAGCGCTCTGTGGCGGTCATTCAGAAACGGCGATTTCGAAGAAGAAGACGTGTGGGACGTTCTCAAGGAGAAATC
AACGACAACGAATTCGAAGAGCTCCGATGATTCCAAGTTCTTCACCGATTCGTCCATTGTCGCCTCTGTTTCCGCCGCGAATCACTTTCCGTCTGCTTCCAGAATGATTC
CGAGGCCAAACGGCAGCGGCAATTTCCAGATTACGCCGCGATCGGCTCCTCGGTCGATTCCGCAGTGGTTCACACCTAACGGAAATAAAAACCCTAGGAAATCTGTTCCG
GAGCACGATGATGACGGCGGCGGCGGCGACGACGACGGCGATAGCGAGGATGAGGATGAGGAAGGATTCGATTGCAGAGTTCCGCCGCATGAATTGATTGCGAAGAGACT
GGCGAGGGCGCAGATTTCATCGTTCTCCGTGTTCGAAGGAGTTGGAAGAACTTTGAAAGGGAGAGATCTGAGTAAAGTAAGAAATGCTGTTCTTACCAAAACTGGTTTTC
TCGAATCACTA
mRNA sequenceShow/hide mRNA sequence
ATGGACGGCGGCGGACATGGACTGAGCAGGCAGAGCAGCGCTCTGTGGCGGTCATTCAGAAACGGCGATTTCGAAGAAGAAGACGTGTGGGACGTTCTCAAGGAGAAATC
AACGACAACGAATTCGAAGAGCTCCGATGATTCCAAGTTCTTCACCGATTCGTCCATTGTCGCCTCTGTTTCCGCCGCGAATCACTTTCCGTCTGCTTCCAGAATGATTC
CGAGGCCAAACGGCAGCGGCAATTTCCAGATTACGCCGCGATCGGCTCCTCGGTCGATTCCGCAGTGGTTCACACCTAACGGAAATAAAAACCCTAGGAAATCTGTTCCG
GAGCACGATGATGACGGCGGCGGCGGCGACGACGACGGCGATAGCGAGGATGAGGATGAGGAAGGATTCGATTGCAGAGTTCCGCCGCATGAATTGATTGCGAAGAGACT
GGCGAGGGCGCAGATTTCATCGTTCTCCGTGTTCGAAGGAGTTGGAAGAACTTTGAAAGGGAGAGATCTGAGTAAAGTAAGAAATGCTGTTCTTACCAAAACTGGTTTTC
TCGAATCACTA
Protein sequenceShow/hide protein sequence
MDGGGHGLSRQSSALWRSFRNGDFEEEDVWDVLKEKSTTTNSKSSDDSKFFTDSSIVASVSAANHFPSASRMIPRPNGSGNFQITPRSAPRSIPQWFTPNGNKNPRKSVP
EHDDDGGGGDDDGDSEDEDEEGFDCRVPPHELIAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLTKTGFLESL