; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS008132 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008132
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionF-box/LRR-repeat 20
Genome locationscaffold703:484160..487648
RNA-Seq ExpressionMS008132
SyntenyMS008132
Gene Ontology termsGO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (biological process)
GO:0019005 - SCF ubiquitin ligase complex (cellular component)
InterPro domainsIPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022139527.1 uncharacterized protein LOC111010421 [Momordica charantia]5.1e-20197.31Show/hide
Query:  METVEEAKIISKTLGNLDLNQKFISKPTTSDPFAKSPFLDSNQKSSLKHTSLSSGSCLFLVTGLPFERKKTPSLVSLCVGVIGKNLEDIIPDLDEISANF
        METVEEAKIISKTLGNLDLNQKFISKPTTSDPFAKSPFLDSNQKSSLKHTSLSS        GLPFERKKTPSLVSLCVGVIGKNLEDIIPDLDEISANF
Subjt:  METVEEAKIISKTLGNLDLNQKFISKPTTSDPFAKSPFLDSNQKSSLKHTSLSSGSCLFLVTGLPFERKKTPSLVSLCVGVIGKNLEDIIPDLDEISANF

Query:  PSDVKQALAAVARRRKLLDDDVVISLADCSWETLDVSGSEVSDFGLAKVAQKCKFLRAVDISRCNKITAVGISELVQHCCSLETLRCGGCSRSDDTTRRC
        PSDVKQALAAVARRRKLLDDDVVISLADCSWETLDVSGSEVSDFGLAKVAQKCKFLRAVDISRCNKITA GISELVQHCCSLETLRCGGCSRSDDTTRRC
Subjt:  PSDVKQALAAVARRRKLLDDDVVISLADCSWETLDVSGSEVSDFGLAKVAQKCKFLRAVDISRCNKITAVGISELVQHCCSLETLRCGGCSRSDDTTRRC

Query:  LDVFKPRLDDIEGDSWEELDTAEFANGAQSLRWLVWPKIDKDSLEMFSAECPRITVNPKPSPFGFRGSRVPLEAWPNIALDDHAIVDIDPKTWAVARSIS
        LDVFKPRLDDIEGDSWEELDTAEFANGAQSLRWLVWPKIDKDSLEMFSAECPRITVNPKPSPFGFRGSRVP EAWPNIALDDHAIVDIDPKTWAVARSIS
Subjt:  LDVFKPRLDDIEGDSWEELDTAEFANGAQSLRWLVWPKIDKDSLEMFSAECPRITVNPKPSPFGFRGSRVPLEAWPNIALDDHAIVDIDPKTWAVARSIS

Query:  RALVSPPNPSELSLAEKFRLAFVERDTRLAPKRAKNARQHQRRAEREWMTTSPRAKALILASQASKNLQSRT
        RALVSPPNPSELSLAEKFRLAFVERDTRLAPKRAKNARQHQRRAEREWMTTSPRAKALILASQASKNLQSRT
Subjt:  RALVSPPNPSELSLAEKFRLAFVERDTRLAPKRAKNARQHQRRAEREWMTTSPRAKALILASQASKNLQSRT

XP_022941466.1 uncharacterized protein LOC111446756 [Cucurbita moschata]9.8e-16883.11Show/hide
Query:  METVEEAKIISKTLGNLDLNQKFISKPTTSDPFAKSPFLDSNQKSSLKHT-SLSSGSCLFLVTGLPFERKKTPSLVSLCVGVIGKNLEDIIPDLDEISAN
        MET+EE KIISKT   L+LNQKF SKPT+SDPFAKS  LDS+ +SS K T S SSG      TGLPFERKKTPSLVSLCVG+IGK+LEDII DLDEISA+
Subjt:  METVEEAKIISKTLGNLDLNQKFISKPTTSDPFAKSPFLDSNQKSSLKHT-SLSSGSCLFLVTGLPFERKKTPSLVSLCVGVIGKNLEDIIPDLDEISAN

Query:  FPSDVKQALAAVARRRKLLDDDVVISLADCSWETLDVSGSEVSDFGLAKVAQKCKFLRAVDISRCNKITAVGISELVQHCCSLETLRCGGCSRSDDTTRR
        FPSDVKQ++ A+ARRRKLLDDDVVISLAD SWETLDVSGS+VSDFGL KVAQ CK LRAVDISRCNKITA GISELVQHCCSLETLRCGGC RSDDT RR
Subjt:  FPSDVKQALAAVARRRKLLDDDVVISLADCSWETLDVSGSEVSDFGLAKVAQKCKFLRAVDISRCNKITAVGISELVQHCCSLETLRCGGCSRSDDTTRR

Query:  CLDVFKPRLDDIEGDSWEELDTAEFANGAQSLRWLVWPKIDKDSLEMFSAECPRITVNPKPSPFGFRGSRVPLEAWPNIALDDHAIVDIDPKTWAVARSI
        CLD+FKPRLDDIEGDSWE+LDTAE ANGAQSLRWLVWPKID++SLEMFS ECPRITVNPKPSPF F G RVP EA PNIALD+HAIVDIDPKTWAVAR  
Subjt:  CLDVFKPRLDDIEGDSWEELDTAEFANGAQSLRWLVWPKIDKDSLEMFSAECPRITVNPKPSPFGFRGSRVPLEAWPNIALDDHAIVDIDPKTWAVARSI

Query:  SRALVSPPNPSELSLAEKFRLAFVERDTRLAPKRAKNARQHQRRAEREWMTTSPRAKALILASQASKNLQSRT
        SRA V P N SELSLAEKFRLAF+ERDTRLAPKRAKNARQHQRRAEREWMTTS RAKAL LAS+ASK LQS T
Subjt:  SRALVSPPNPSELSLAEKFRLAFVERDTRLAPKRAKNARQHQRRAEREWMTTSPRAKALILASQASKNLQSRT

XP_022981521.1 uncharacterized protein LOC111480610 [Cucurbita maxima]4.0e-16982.26Show/hide
Query:  METVEEAKIISKTLGNLDLNQKFISKPTTSDPFAKSPFLDSNQKSSLKHTSLSSGSCLFLVTGLPFERKKTPSLVSLCVGVIGKNLEDIIPDLDEISANF
        MET+EE KIISKT   L+LNQK+ SKPT+SDPFAKS FLDS+ KSS K T+  S       TG PFERKKTPSLVSLCVG++GK+LEDII DLDEISA+F
Subjt:  METVEEAKIISKTLGNLDLNQKFISKPTTSDPFAKSPFLDSNQKSSLKHTSLSSGSCLFLVTGLPFERKKTPSLVSLCVGVIGKNLEDIIPDLDEISANF

Query:  PSDVKQALAAVARRRKLLDDDVVISLADCSWETLDVSGSEVSDFGLAKVAQKCKFLRAVDISRCNKITAVGISELVQHCCSLETLRCGGCSRSDDTTRRC
        PSDVKQ++ A+ARRRKLLDDDVVISLAD SWETLDVSGS+VSDFGL KV Q CKFLRAVDISRCNKITA G+SELVQHCCSLETLRCGGC RSDDT RRC
Subjt:  PSDVKQALAAVARRRKLLDDDVVISLADCSWETLDVSGSEVSDFGLAKVAQKCKFLRAVDISRCNKITAVGISELVQHCCSLETLRCGGCSRSDDTTRRC

Query:  LDVFKPRLDDIEGDSWEELDTAEFANGAQSLRWLVWPKIDKDSLEMFSAECPRITVNPKPSPFGFRGSRVPLEAWPNIALDDHAIVDIDPKTWAVARSIS
        LD+FKPRLDDIEGDSWE+LDTAE ANGAQSLRWLVWPKID++SLEMFS ECPRITVNPKPSPF FRG RVP EA PNIALD+HAIVDIDPKTWAVARS S
Subjt:  LDVFKPRLDDIEGDSWEELDTAEFANGAQSLRWLVWPKIDKDSLEMFSAECPRITVNPKPSPFGFRGSRVPLEAWPNIALDDHAIVDIDPKTWAVARSIS

Query:  RALVSPPNPSELSLAEKFRLAFVERDTRLAPKRAKNARQHQRRAEREWMTTSPRAKALILASQASKNLQSRT
        RA V P N SELSLAEKFRLAF+ERDTRLAPKRAKN RQHQRRAEREWMTTS RAKAL LAS+ASK LQS T
Subjt:  RALVSPPNPSELSLAEKFRLAFVERDTRLAPKRAKNARQHQRRAEREWMTTSPRAKALILASQASKNLQSRT

XP_023525892.1 uncharacterized protein LOC111789373 [Cucurbita pepo subsp. pepo]2.0e-16882.8Show/hide
Query:  METVEEAKIISKTLGNLDLNQKFISKPTTSDPFAKSPFLDSNQKSSLKHTSLSSGSCLFLVTGLPFERKKTPSLVSLCVGVIGKNLEDIIPDLDEISANF
        MET+EEAKIISKT   L+LNQKF SKPT+SDPFA+S  LDS+ KSS K T+  S       TGL FERKKTPSLVSLCVG+IGK+LEDII DLDEISA+F
Subjt:  METVEEAKIISKTLGNLDLNQKFISKPTTSDPFAKSPFLDSNQKSSLKHTSLSSGSCLFLVTGLPFERKKTPSLVSLCVGVIGKNLEDIIPDLDEISANF

Query:  PSDVKQALAAVARRRKLLDDDVVISLADCSWETLDVSGSEVSDFGLAKVAQKCKFLRAVDISRCNKITAVGISELVQHCCSLETLRCGGCSRSDDTTRRC
        PSDVKQ++ A+ARRRKLLDDDVVISLAD SWETLDVSGS+VSDFGL KVA+ CKFLRAVDISRCNKITA G+SELVQHCCSLETLRCGGC RSDDT RRC
Subjt:  PSDVKQALAAVARRRKLLDDDVVISLADCSWETLDVSGSEVSDFGLAKVAQKCKFLRAVDISRCNKITAVGISELVQHCCSLETLRCGGCSRSDDTTRRC

Query:  LDVFKPRLDDIEGDSWEELDTAEFANGAQSLRWLVWPKIDKDSLEMFSAECPRITVNPKPSPFGFRGSRVPLEAWPNIALDDHAIVDIDPKTWAVARSIS
        LD+FKPRLDDIEGDSWE+LDTAE ANGAQSLRWLVWPKID++SLEMFS ECPRITVNPKPSPF FRG RVP EA PNIALD+HAIVDIDPKTWAVARS S
Subjt:  LDVFKPRLDDIEGDSWEELDTAEFANGAQSLRWLVWPKIDKDSLEMFSAECPRITVNPKPSPFGFRGSRVPLEAWPNIALDDHAIVDIDPKTWAVARSIS

Query:  RALVSPPNPSELSLAEKFRLAFVERDTRLAPKRAKNARQHQRRAEREWMTTSPRAKALILASQASKNLQSRT
        RA V P N SELSLAEKFRLAF+ERDTRLAPKRAKNARQHQRRAEREWMTTS RAKAL LAS+ASK LQS T
Subjt:  RALVSPPNPSELSLAEKFRLAFVERDTRLAPKRAKNARQHQRRAEREWMTTSPRAKALILASQASKNLQSRT

XP_038896648.1 uncharacterized protein LOC120084911 [Benincasa hispida]5.2e-16982.8Show/hide
Query:  METVEEAKIISKTLGNLDLNQKFISKPTTSDPFAKSPFLDSNQKSSLKHTSLSSGSCLFLVTGLPFERKKTPSLVSLCVGVIGKNLEDIIPDLDEISANF
        MET++EAKII+KT   LDLNQK  SKP  S+PFA S  LD NQKSS K T+  S       TGLPFERKK PSLVSLCVGVIGK+LEDIIPDLDEISANF
Subjt:  METVEEAKIISKTLGNLDLNQKFISKPTTSDPFAKSPFLDSNQKSSLKHTSLSSGSCLFLVTGLPFERKKTPSLVSLCVGVIGKNLEDIIPDLDEISANF

Query:  PSDVKQALAAVARRRKLLDDDVVISLADCSWETLDVSGSEVSDFGLAKVAQKCKFLRAVDISRCNKITAVGISELVQHCCSLETLRCGGCSRSDDTTRRC
        PSDVK++LAAVARRRKLLDDD++ISLAD SWETL+VSGSEVSDFGLA+VA+ CKFLRAVDISRCNKITA G+SELVQHCCSLETLRCGGC RSDDT RR 
Subjt:  PSDVKQALAAVARRRKLLDDDVVISLADCSWETLDVSGSEVSDFGLAKVAQKCKFLRAVDISRCNKITAVGISELVQHCCSLETLRCGGCSRSDDTTRRC

Query:  LDVFKPRLDDIEGDSWEELDTAEFANGAQSLRWLVWPKIDKDSLEMFSAECPRITVNPKPSPFGFRGSRVPLEAWPNIALDDHAIVDIDPKTWAVARSIS
        LD+FKPRLDDIEGDSWEELDTAE ANGAQSLRWLVWPKIDKDSLE+FS ECPRIT+NPKPSPFGFRG RVP EA PNIALD+HAIVDI+P+TWAV R  +
Subjt:  LDVFKPRLDDIEGDSWEELDTAEFANGAQSLRWLVWPKIDKDSLEMFSAECPRITVNPKPSPFGFRGSRVPLEAWPNIALDDHAIVDIDPKTWAVARSIS

Query:  RALVSPPNPSELSLAEKFRLAFVERDTRLAPKRAKNARQHQRRAEREWMTTSPRAKALILASQASKNLQSRT
        +A VSP NPSELSLAEKFRLAFVERDTRLAPKRAKNARQHQRRAEREWMTTS RAKAL+LASQASK LQSRT
Subjt:  RALVSPPNPSELSLAEKFRLAFVERDTRLAPKRAKNARQHQRRAEREWMTTSPRAKALILASQASKNLQSRT

TrEMBL top hitse value%identityAlignment
A0A1S3BJ08 uncharacterized protein LOC1034901397.3e-16179.3Show/hide
Query:  METVEEAKIISKTLGNLDLNQKFISKPTTSDPFAKSPFLDSNQKSSLKHTSLSSGSCLFLVTGLPFERKKTPSLVSLCVGVIGKNLEDIIPDLDEISANF
        MET+EEAK I+KT   LDLNQK  S+PT S+ F KS   D +QKS  K T+          + L FERKK P+LVSLCVGVIGK+LEDIIPDLDEISANF
Subjt:  METVEEAKIISKTLGNLDLNQKFISKPTTSDPFAKSPFLDSNQKSSLKHTSLSSGSCLFLVTGLPFERKKTPSLVSLCVGVIGKNLEDIIPDLDEISANF

Query:  PSDVKQALAAVARRRKLLDDDVVISLADCSWETLDVSGSEVSDFGLAKVAQKCKFLRAVDISRCNKITAVGISELVQHCCSLETLRCGGCSRSDDTTRRC
        PSDVKQ++AAVARRR+LL+DDV+ISL D SWETLDVSGSEVSDFGLA++ + CK LRAVDISRCNKITA G+SELVQHCCSLETLRCGGC RSD T RR 
Subjt:  PSDVKQALAAVARRRKLLDDDVVISLADCSWETLDVSGSEVSDFGLAKVAQKCKFLRAVDISRCNKITAVGISELVQHCCSLETLRCGGCSRSDDTTRRC

Query:  LDVFKPRLDDIEGDSWEELDTAEFANGAQSLRWLVWPKIDKDSLEMFSAECPRITVNPKPSPFGFRGSRVPLEAWPNIALDDHAIVDIDPKTWAVARSIS
        LD+FKPRLDDIEGDSWEELDTAE ANGAQSLRWLVWPKIDKDSLE+FS ECPRIT+NPKPSPFGFRG +VP EA PNIALD+H IVDIDPKTWAV RS  
Subjt:  LDVFKPRLDDIEGDSWEELDTAEFANGAQSLRWLVWPKIDKDSLEMFSAECPRITVNPKPSPFGFRGSRVPLEAWPNIALDDHAIVDIDPKTWAVARSIS

Query:  RALVSPPNPSELSLAEKFRLAFVERDTRLAPKRAKNARQHQRRAEREWMTTSPRAKALILASQASKNLQSRT
        RA +SP NPSELSLAEKFRLAFVERDTRLAPKRAKNARQHQRRAEREWMTTS RAKAL LASQASK+LQSRT
Subjt:  RALVSPPNPSELSLAEKFRLAFVERDTRLAPKRAKNARQHQRRAEREWMTTSPRAKALILASQASKNLQSRT

A0A5D3DI95 Protein AMN1-like protein2.1e-16079.03Show/hide
Query:  METVEEAKIISKTLGNLDLNQKFISKPTTSDPFAKSPFLDSNQKSSLKHTSLSSGSCLFLVTGLPFERKKTPSLVSLCVGVIGKNLEDIIPDLDEISANF
        MET+EEAK I+KT    DLNQK  S+PT S+ F KS   D +QKS  K T+          + L FERKK P+LVSLCVGVIGK+LEDIIPDLDEISANF
Subjt:  METVEEAKIISKTLGNLDLNQKFISKPTTSDPFAKSPFLDSNQKSSLKHTSLSSGSCLFLVTGLPFERKKTPSLVSLCVGVIGKNLEDIIPDLDEISANF

Query:  PSDVKQALAAVARRRKLLDDDVVISLADCSWETLDVSGSEVSDFGLAKVAQKCKFLRAVDISRCNKITAVGISELVQHCCSLETLRCGGCSRSDDTTRRC
        PSDVKQ++AAVARRR+LL+DDV+ISL D SWETLDVSGSEVSDFGLA++ + CK LRAVDISRCNKITA G+SELVQHCCSLETLRCGGC RSD T RR 
Subjt:  PSDVKQALAAVARRRKLLDDDVVISLADCSWETLDVSGSEVSDFGLAKVAQKCKFLRAVDISRCNKITAVGISELVQHCCSLETLRCGGCSRSDDTTRRC

Query:  LDVFKPRLDDIEGDSWEELDTAEFANGAQSLRWLVWPKIDKDSLEMFSAECPRITVNPKPSPFGFRGSRVPLEAWPNIALDDHAIVDIDPKTWAVARSIS
        LD+FKPRLDDIEGDSWEELDTAE ANGAQSLRWLVWPKIDKDSLE+FS ECPRIT+NPKPSPFGFRG +VP EA PNIALD+H IVDIDPKTWAV RS  
Subjt:  LDVFKPRLDDIEGDSWEELDTAEFANGAQSLRWLVWPKIDKDSLEMFSAECPRITVNPKPSPFGFRGSRVPLEAWPNIALDDHAIVDIDPKTWAVARSIS

Query:  RALVSPPNPSELSLAEKFRLAFVERDTRLAPKRAKNARQHQRRAEREWMTTSPRAKALILASQASKNLQSRT
        RA +SP NPSELSLAEKFRLAFVERDTRLAPKRAKNARQHQRRAEREWMTTS RAKAL LASQASK+LQSRT
Subjt:  RALVSPPNPSELSLAEKFRLAFVERDTRLAPKRAKNARQHQRRAEREWMTTSPRAKALILASQASKNLQSRT

A0A6J1CE68 uncharacterized protein LOC1110104212.5e-20197.31Show/hide
Query:  METVEEAKIISKTLGNLDLNQKFISKPTTSDPFAKSPFLDSNQKSSLKHTSLSSGSCLFLVTGLPFERKKTPSLVSLCVGVIGKNLEDIIPDLDEISANF
        METVEEAKIISKTLGNLDLNQKFISKPTTSDPFAKSPFLDSNQKSSLKHTSLSS        GLPFERKKTPSLVSLCVGVIGKNLEDIIPDLDEISANF
Subjt:  METVEEAKIISKTLGNLDLNQKFISKPTTSDPFAKSPFLDSNQKSSLKHTSLSSGSCLFLVTGLPFERKKTPSLVSLCVGVIGKNLEDIIPDLDEISANF

Query:  PSDVKQALAAVARRRKLLDDDVVISLADCSWETLDVSGSEVSDFGLAKVAQKCKFLRAVDISRCNKITAVGISELVQHCCSLETLRCGGCSRSDDTTRRC
        PSDVKQALAAVARRRKLLDDDVVISLADCSWETLDVSGSEVSDFGLAKVAQKCKFLRAVDISRCNKITA GISELVQHCCSLETLRCGGCSRSDDTTRRC
Subjt:  PSDVKQALAAVARRRKLLDDDVVISLADCSWETLDVSGSEVSDFGLAKVAQKCKFLRAVDISRCNKITAVGISELVQHCCSLETLRCGGCSRSDDTTRRC

Query:  LDVFKPRLDDIEGDSWEELDTAEFANGAQSLRWLVWPKIDKDSLEMFSAECPRITVNPKPSPFGFRGSRVPLEAWPNIALDDHAIVDIDPKTWAVARSIS
        LDVFKPRLDDIEGDSWEELDTAEFANGAQSLRWLVWPKIDKDSLEMFSAECPRITVNPKPSPFGFRGSRVP EAWPNIALDDHAIVDIDPKTWAVARSIS
Subjt:  LDVFKPRLDDIEGDSWEELDTAEFANGAQSLRWLVWPKIDKDSLEMFSAECPRITVNPKPSPFGFRGSRVPLEAWPNIALDDHAIVDIDPKTWAVARSIS

Query:  RALVSPPNPSELSLAEKFRLAFVERDTRLAPKRAKNARQHQRRAEREWMTTSPRAKALILASQASKNLQSRT
        RALVSPPNPSELSLAEKFRLAFVERDTRLAPKRAKNARQHQRRAEREWMTTSPRAKALILASQASKNLQSRT
Subjt:  RALVSPPNPSELSLAEKFRLAFVERDTRLAPKRAKNARQHQRRAEREWMTTSPRAKALILASQASKNLQSRT

A0A6J1FL68 uncharacterized protein LOC1114467564.7e-16883.11Show/hide
Query:  METVEEAKIISKTLGNLDLNQKFISKPTTSDPFAKSPFLDSNQKSSLKHT-SLSSGSCLFLVTGLPFERKKTPSLVSLCVGVIGKNLEDIIPDLDEISAN
        MET+EE KIISKT   L+LNQKF SKPT+SDPFAKS  LDS+ +SS K T S SSG      TGLPFERKKTPSLVSLCVG+IGK+LEDII DLDEISA+
Subjt:  METVEEAKIISKTLGNLDLNQKFISKPTTSDPFAKSPFLDSNQKSSLKHT-SLSSGSCLFLVTGLPFERKKTPSLVSLCVGVIGKNLEDIIPDLDEISAN

Query:  FPSDVKQALAAVARRRKLLDDDVVISLADCSWETLDVSGSEVSDFGLAKVAQKCKFLRAVDISRCNKITAVGISELVQHCCSLETLRCGGCSRSDDTTRR
        FPSDVKQ++ A+ARRRKLLDDDVVISLAD SWETLDVSGS+VSDFGL KVAQ CK LRAVDISRCNKITA GISELVQHCCSLETLRCGGC RSDDT RR
Subjt:  FPSDVKQALAAVARRRKLLDDDVVISLADCSWETLDVSGSEVSDFGLAKVAQKCKFLRAVDISRCNKITAVGISELVQHCCSLETLRCGGCSRSDDTTRR

Query:  CLDVFKPRLDDIEGDSWEELDTAEFANGAQSLRWLVWPKIDKDSLEMFSAECPRITVNPKPSPFGFRGSRVPLEAWPNIALDDHAIVDIDPKTWAVARSI
        CLD+FKPRLDDIEGDSWE+LDTAE ANGAQSLRWLVWPKID++SLEMFS ECPRITVNPKPSPF F G RVP EA PNIALD+HAIVDIDPKTWAVAR  
Subjt:  CLDVFKPRLDDIEGDSWEELDTAEFANGAQSLRWLVWPKIDKDSLEMFSAECPRITVNPKPSPFGFRGSRVPLEAWPNIALDDHAIVDIDPKTWAVARSI

Query:  SRALVSPPNPSELSLAEKFRLAFVERDTRLAPKRAKNARQHQRRAEREWMTTSPRAKALILASQASKNLQSRT
        SRA V P N SELSLAEKFRLAF+ERDTRLAPKRAKNARQHQRRAEREWMTTS RAKAL LAS+ASK LQS T
Subjt:  SRALVSPPNPSELSLAEKFRLAFVERDTRLAPKRAKNARQHQRRAEREWMTTSPRAKALILASQASKNLQSRT

A0A6J1IWS7 uncharacterized protein LOC1114806101.9e-16982.26Show/hide
Query:  METVEEAKIISKTLGNLDLNQKFISKPTTSDPFAKSPFLDSNQKSSLKHTSLSSGSCLFLVTGLPFERKKTPSLVSLCVGVIGKNLEDIIPDLDEISANF
        MET+EE KIISKT   L+LNQK+ SKPT+SDPFAKS FLDS+ KSS K T+  S       TG PFERKKTPSLVSLCVG++GK+LEDII DLDEISA+F
Subjt:  METVEEAKIISKTLGNLDLNQKFISKPTTSDPFAKSPFLDSNQKSSLKHTSLSSGSCLFLVTGLPFERKKTPSLVSLCVGVIGKNLEDIIPDLDEISANF

Query:  PSDVKQALAAVARRRKLLDDDVVISLADCSWETLDVSGSEVSDFGLAKVAQKCKFLRAVDISRCNKITAVGISELVQHCCSLETLRCGGCSRSDDTTRRC
        PSDVKQ++ A+ARRRKLLDDDVVISLAD SWETLDVSGS+VSDFGL KV Q CKFLRAVDISRCNKITA G+SELVQHCCSLETLRCGGC RSDDT RRC
Subjt:  PSDVKQALAAVARRRKLLDDDVVISLADCSWETLDVSGSEVSDFGLAKVAQKCKFLRAVDISRCNKITAVGISELVQHCCSLETLRCGGCSRSDDTTRRC

Query:  LDVFKPRLDDIEGDSWEELDTAEFANGAQSLRWLVWPKIDKDSLEMFSAECPRITVNPKPSPFGFRGSRVPLEAWPNIALDDHAIVDIDPKTWAVARSIS
        LD+FKPRLDDIEGDSWE+LDTAE ANGAQSLRWLVWPKID++SLEMFS ECPRITVNPKPSPF FRG RVP EA PNIALD+HAIVDIDPKTWAVARS S
Subjt:  LDVFKPRLDDIEGDSWEELDTAEFANGAQSLRWLVWPKIDKDSLEMFSAECPRITVNPKPSPFGFRGSRVPLEAWPNIALDDHAIVDIDPKTWAVARSIS

Query:  RALVSPPNPSELSLAEKFRLAFVERDTRLAPKRAKNARQHQRRAEREWMTTSPRAKALILASQASKNLQSRT
        RA V P N SELSLAEKFRLAF+ERDTRLAPKRAKN RQHQRRAEREWMTTS RAKAL LAS+ASK LQS T
Subjt:  RALVSPPNPSELSLAEKFRLAFVERDTRLAPKRAKNARQHQRRAEREWMTTSPRAKALILASQASKNLQSRT

SwissProt top hitse value%identityAlignment
B1H1X1 F-box/LRR-repeat protein 176.5e-0525.13Show/hide
Query:  RKLLDDDVVISLADCSWETLDVSGSE---VSDFGLAKVAQKCKFLRAVDISRCNKITAVGISELVQHCCSLETLRCGGCSRSDDTT-----RRCLDVFKP
        R+ + D+++  +A  S    +++ S+   VSD G+  VA KC  L      RC +++ + +  L  HC SL+ +  G   +  D       RRC +    
Subjt:  RKLLDDDVVISLADCSWETLDVSGSE---VSDFGLAKVAQKCKFLRAVDISRCNKITAVGISELVQHCCSLETLRCGGCSRSDDTT-----RRCLDVFKP

Query:  RLDDIE-GDSWEELDTA--EFANGAQSLRWLVWPK---IDKDSLEMFSAECPRITVNPKPSPFGFRGSRVPLEAWPNI-------ALDDHAIVDIDPKT
         L DI  G  ++  D      A G Q L+ +   +   +  +S++ F+  CP +         GF G  V  E   N+       +LD   I ++D +T
Subjt:  RLDDIE-GDSWEELDTA--EFANGAQSLRWLVWPK---IDKDSLEMFSAECPRITVNPKPSPFGFRGSRVPLEAWPNI-------ALDDHAIVDIDPKT

Q0P4D1 Protein AMN1 homolog1.3e-0525.85Show/hide
Query:  SLVSLCVGVIGKNLEDIIPDLDEISANFPSDVKQALAAVARRRKLLDDDVVISLADCSWETLDVSGSEVSDF------------------------GLAK
        SL+SLC   + +  E       E     P+ VK  L  +      + D  +  L      TLD+   ++SD                         GL  
Subjt:  SLVSLCVGVIGKNLEDIIPDLDEISANFPSDVKQALAAVARRRKLLDDDVVISLADCSWETLDVSGSEVSDF------------------------GLAK

Query:  VAQKCKFLRAVDISRCNKITAVGISELVQHCCSLETLRCGGCSRSDD
        +A +C +L+ VD++ C  +T  GI  L +HC  LE +   GCS   D
Subjt:  VAQKCKFLRAVDISRCNKITAVGISELVQHCCSLETLRCGGCSRSDD

Q58DG6 F-box/LRR-repeat protein 202.5e-0429.47Show/hide
Query:  KLLDDDVVISLADC-SWETLDVSG-SEVSDFGLAKVAQKCKFLRAVDISRCNKITAVGISELVQHCCSLETLRCGGCSRSDDTTRRCLDVFKPRL
        ++ D+ ++     C   ++L  SG S ++D  L  + Q C  LR ++++RC+++T VG + L ++C  LE +    C +  D+T   L +  PRL
Subjt:  KLLDDDVVISLADC-SWETLDVSG-SEVSDFGLAKVAQKCKFLRAVDISRCNKITAVGISELVQHCCSLETLRCGGCSRSDDTTRRCLDVFKPRL

Q96IG2 F-box/LRR-repeat protein 202.5e-0429.47Show/hide
Query:  KLLDDDVVISLADC-SWETLDVSG-SEVSDFGLAKVAQKCKFLRAVDISRCNKITAVGISELVQHCCSLETLRCGGCSRSDDTTRRCLDVFKPRL
        ++ D+ ++     C   ++L  SG S ++D  L  + Q C  LR ++++RC+++T VG + L ++C  LE +    C +  D+T   L +  PRL
Subjt:  KLLDDDVVISLADC-SWETLDVSG-SEVSDFGLAKVAQKCKFLRAVDISRCNKITAVGISELVQHCCSLETLRCGGCSRSDDTTRRCLDVFKPRL

Q9CZV8 F-box/LRR-repeat protein 202.5e-0429.47Show/hide
Query:  KLLDDDVVISLADC-SWETLDVSG-SEVSDFGLAKVAQKCKFLRAVDISRCNKITAVGISELVQHCCSLETLRCGGCSRSDDTTRRCLDVFKPRL
        ++ D+ ++     C   ++L  SG S ++D  L  + Q C  LR ++++RC+++T VG + L ++C  LE +    C +  D+T   L +  PRL
Subjt:  KLLDDDVVISLADC-SWETLDVSG-SEVSDFGLAKVAQKCKFLRAVDISRCNKITAVGISELVQHCCSLETLRCGGCSRSDDTTRRCLDVFKPRL

Arabidopsis top hitse value%identityAlignment
AT4G26980.1 RNI-like superfamily protein2.8e-11257.94Show/hide
Query:  ISKTLGNLDLNQKFISKPTTSDPFAKSPFLDSNQKSSLKHTSLSSGSCLFLVTGLPFERKKTPSLVSLCVGVIGKNLEDIIPDLDEISANFPSDVKQALA
        + K+L NLDLN      P   +    S ++ S++ S LK                     K PSLVS C+GVIGK+LED+I  L EIS  FP+D+K ++A
Subjt:  ISKTLGNLDLNQKFISKPTTSDPFAKSPFLDSNQKSSLKHTSLSSGSCLFLVTGLPFERKKTPSLVSLCVGVIGKNLEDIIPDLDEISANFPSDVKQALA

Query:  AVARRRKLLDDDVVISLADCSWETLDVSGSEVSDFGLAKVAQKCKFLRAVDISRCNKITAVGISELVQHCCSLETLRCGGCSRSDDTTRRCLDVFKPRLD
        A+ARR+KLLDDDV+I LAD SWE LDVSGS+V++FGLAKVA+ CK LRAVDISRCNKI+++G+ ELVQHC SLETLRCGGC  S+ T RR L +FKP L 
Subjt:  AVARRRKLLDDDVVISLADCSWETLDVSGSEVSDFGLAKVAQKCKFLRAVDISRCNKITAVGISELVQHCCSLETLRCGGCSRSDDTTRRCLDVFKPRLD

Query:  DIEGDSWEELDTAEFANGAQSLRWLVWPKIDKDSLEMFSAECPRITVNPKPSPFGFRGSRVPLEAWPNIALDDHAIVDIDPKTWAVARSISRALVSPPNP
        ++EG++WEE+DT+E  +G QSLRWLVWP+IDKDSLEM S+ECPRI VNPKPS   +R   VP EA P++ALD+  + DIDPKTW V   + +   S P  
Subjt:  DIEGDSWEELDTAEFANGAQSLRWLVWPKIDKDSLEMFSAECPRITVNPKPSPFGFRGSRVPLEAWPNIALDDHAIVDIDPKTWAVARSISRALVSPPNP

Query:  SELSLAEKFRLAFVERDTRLAPKRAKNARQHQRRAEREWMTTSPRAKALILASQASKNL
        +ELS+AEKFRLAF ERD R+APKRAKNARQ QRRAER+WM +S  AKA++ AS+A+++L
Subjt:  SELSLAEKFRLAFVERDTRLAPKRAKNARQHQRRAEREWMTTSPRAKALILASQASKNL

AT5G23340.1 RNI-like superfamily protein7.3e-0439.06Show/hide
Query:  LDVS-GSEVSDFGLAKVAQKCKFLRAVDISRCNKITAVGISELVQHCCSLETLRCGGCSRSDDT
        LDVS   ++SD GL+ VA+ C  LRA+ ++ C  IT   +  L + C  LE L   GC+   D+
Subjt:  LDVS-GSEVSDFGLAKVAQKCKFLRAVDISRCNKITAVGISELVQHCCSLETLRCGGCSRSDDT

AT5G25350.1 EIN3-binding F box protein 26.6e-0532.35Show/hide
Query:  VSDFGLAKVAQKCKFLRAVDISRCNKITAVGISELVQHCCSLETLRCGGCSRSDD-----TTRRCLDV
        VSD GL+++A+ C  +  +D+SRC  IT  G+  + ++C +L  L    CS   +       RRC+++
Subjt:  VSDFGLAKVAQKCKFLRAVDISRCNKITAVGISELVQHCCSLETLRCGGCSRSDD-----TTRRCLDV

AT5G27920.1 F-box family protein5.1e-0532.2Show/hide
Query:  ETLDVSGSEVSDFGLAKVAQKCKFLRAVDISRCNKITAVGISELVQHCCSLETLRCGGC
        +T+ + G+ VSD  L  ++  C+ L  + +SRC  +T +G+  L ++C +L+TL    C
Subjt:  ETLDVSGSEVSDFGLAKVAQKCKFLRAVDISRCNKITAVGISELVQHCCSLETLRCGGC

AT5G67250.1 SKP1/ASK1-interacting protein 21.9e-0435.29Show/hide
Query:  KQALAAVARRRKLLDDDVVISLADCS-WETLD-VSGSEVSDFGLAKVAQKCKFLRAVDIS--RCNKITAVGISELVQHCCSLETL
        K +L+ +   R  + D  + +++ CS  ETL  V   E S+FGL  VA++CK LR + I   R N+I   G+  + +HC +L+ L
Subjt:  KQALAAVARRRKLLDDDVVISLADCS-WETLD-VSGSEVSDFGLAKVAQKCKFLRAVDIS--RCNKITAVGISELVQHCCSLETL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACAGTCGAAGAAGCGAAGATCATTTCGAAAACTTTGGGAAACTTAGATTTGAATCAGAAATTCATTTCCAAGCCTACTACTTCTGATCCCTTCGCTAAATCTCC
ATTTCTCGATTCGAATCAGAAATCCAGTTTGAAGCATACTTCTTTATCCTCCGGTTCTTGTTTGTTTTTGGTTACAGGATTACCCTTTGAGAGGAAGAAAACTCCAAGTT
TAGTCAGTTTATGCGTTGGAGTTATTGGCAAGAATTTGGAAGATATAATTCCTGATTTGGATGAGATTAGTGCCAACTTTCCGTCAGATGTGAAGCAAGCACTAGCAGCA
GTTGCCCGAAGAAGGAAATTACTGGACGACGATGTCGTAATCTCCCTGGCGGATTGTTCGTGGGAAACCCTCGATGTCTCTGGTTCAGAAGTTTCTGATTTTGGGTTGGC
AAAAGTTGCCCAGAAATGCAAATTTCTCAGAGCTGTGGATATAAGCCGATGCAACAAGATCACGGCTGTTGGCATTTCTGAACTCGTCCAGCATTGTTGCTCCTTGGAGA
CTCTGCGTTGCGGAGGGTGTTCAAGGAGCGACGATACGACACGAAGATGCTTGGACGTATTTAAGCCGAGGCTGGACGATATAGAAGGGGATTCATGGGAGGAACTTGAT
ACAGCTGAGTTTGCCAATGGAGCACAATCTCTTCGGTGGTTGGTCTGGCCAAAGATAGATAAAGATTCCTTGGAGATGTTTTCTGCAGAATGCCCACGCATTACAGTAAA
TCCAAAGCCATCGCCTTTCGGTTTTAGGGGGAGTCGTGTTCCATTGGAAGCATGGCCAAATATTGCATTGGATGATCATGCCATAGTTGATATCGATCCCAAAACATGGG
CAGTAGCCAGATCCATATCAAGGGCTCTAGTTTCTCCCCCAAATCCCTCAGAGTTGTCTTTGGCTGAGAAATTCAGACTCGCATTCGTGGAAAGGGACACTCGGTTGGCT
CCAAAACGAGCTAAAAATGCGAGGCAACATCAAAGGCGTGCAGAGAGGGAGTGGATGACGACGAGTCCGAGAGCCAAGGCACTGATCTTGGCCTCTCAAGCAAGTAAAAA
TTTACAGAGTCGCACT
mRNA sequenceShow/hide mRNA sequence
ATGGAAACAGTCGAAGAAGCGAAGATCATTTCGAAAACTTTGGGAAACTTAGATTTGAATCAGAAATTCATTTCCAAGCCTACTACTTCTGATCCCTTCGCTAAATCTCC
ATTTCTCGATTCGAATCAGAAATCCAGTTTGAAGCATACTTCTTTATCCTCCGGTTCTTGTTTGTTTTTGGTTACAGGATTACCCTTTGAGAGGAAGAAAACTCCAAGTT
TAGTCAGTTTATGCGTTGGAGTTATTGGCAAGAATTTGGAAGATATAATTCCTGATTTGGATGAGATTAGTGCCAACTTTCCGTCAGATGTGAAGCAAGCACTAGCAGCA
GTTGCCCGAAGAAGGAAATTACTGGACGACGATGTCGTAATCTCCCTGGCGGATTGTTCGTGGGAAACCCTCGATGTCTCTGGTTCAGAAGTTTCTGATTTTGGGTTGGC
AAAAGTTGCCCAGAAATGCAAATTTCTCAGAGCTGTGGATATAAGCCGATGCAACAAGATCACGGCTGTTGGCATTTCTGAACTCGTCCAGCATTGTTGCTCCTTGGAGA
CTCTGCGTTGCGGAGGGTGTTCAAGGAGCGACGATACGACACGAAGATGCTTGGACGTATTTAAGCCGAGGCTGGACGATATAGAAGGGGATTCATGGGAGGAACTTGAT
ACAGCTGAGTTTGCCAATGGAGCACAATCTCTTCGGTGGTTGGTCTGGCCAAAGATAGATAAAGATTCCTTGGAGATGTTTTCTGCAGAATGCCCACGCATTACAGTAAA
TCCAAAGCCATCGCCTTTCGGTTTTAGGGGGAGTCGTGTTCCATTGGAAGCATGGCCAAATATTGCATTGGATGATCATGCCATAGTTGATATCGATCCCAAAACATGGG
CAGTAGCCAGATCCATATCAAGGGCTCTAGTTTCTCCCCCAAATCCCTCAGAGTTGTCTTTGGCTGAGAAATTCAGACTCGCATTCGTGGAAAGGGACACTCGGTTGGCT
CCAAAACGAGCTAAAAATGCGAGGCAACATCAAAGGCGTGCAGAGAGGGAGTGGATGACGACGAGTCCGAGAGCCAAGGCACTGATCTTGGCCTCTCAAGCAAGTAAAAA
TTTACAGAGTCGCACT
Protein sequenceShow/hide protein sequence
METVEEAKIISKTLGNLDLNQKFISKPTTSDPFAKSPFLDSNQKSSLKHTSLSSGSCLFLVTGLPFERKKTPSLVSLCVGVIGKNLEDIIPDLDEISANFPSDVKQALAA
VARRRKLLDDDVVISLADCSWETLDVSGSEVSDFGLAKVAQKCKFLRAVDISRCNKITAVGISELVQHCCSLETLRCGGCSRSDDTTRRCLDVFKPRLDDIEGDSWEELD
TAEFANGAQSLRWLVWPKIDKDSLEMFSAECPRITVNPKPSPFGFRGSRVPLEAWPNIALDDHAIVDIDPKTWAVARSISRALVSPPNPSELSLAEKFRLAFVERDTRLA
PKRAKNARQHQRRAEREWMTTSPRAKALILASQASKNLQSRT