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MS008137 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008137
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionExpression protein
Genome locationscaffold703:527081..527368
RNA-Seq ExpressionMS008137
SyntenyMS008137
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022139678.1 uncharacterized protein LOC111010526 [Momordica charantia]1.6e-45100Show/hide
Query:  MGNCLRRDGAAERWAGEEWGFLAEEKQGSAAAPTAAATEVKIKITKKQLEELLGKADVKGLSVQQVLAQLIAVGDQFHESRHRPWRPVLQSIPEMD
        MGNCLRRDGAAERWAGEEWGFLAEEKQGSAAAPTAAATEVKIKITKKQLEELLGKADVKGLSVQQVLAQLIAVGDQFHESRHRPWRPVLQSIPEMD
Subjt:  MGNCLRRDGAAERWAGEEWGFLAEEKQGSAAAPTAAATEVKIKITKKQLEELLGKADVKGLSVQQVLAQLIAVGDQFHESRHRPWRPVLQSIPEMD
XP_022936225.1 uncharacterized protein LOC111442898 [Cucurbita moschata]2.9e-3172.12Show/hide
Query:  MGNCLRRDGAAERWAGEEWGFLAEEKQG--------SAAAPTAAATEVKIKITKKQLEELLGKADVKGLSVQQVLAQLIAVGDQFHESRHRPWRPVLQSI
        MGNCLRRDGAA +WAGEEW FLA E  G             + AATEVKIKITK+QLEELLGK D+K +SVQQVLAQLI VGDQFHESRHR WRPVLQSI
Subjt:  MGNCLRRDGAAERWAGEEWGFLAEEKQG--------SAAAPTAAATEVKIKITKKQLEELLGKADVKGLSVQQVLAQLIAVGDQFHESRHRPWRPVLQSI

Query:  PEMD
        PE+D
Subjt:  PEMD
XP_022975730.1 uncharacterized protein LOC111475920 [Cucurbita maxima]4.2e-3070.19Show/hide
Query:  MGNCLRRDGAAERWAGEEWGFLAEEKQG--------SAAAPTAAATEVKIKITKKQLEELLGKADVKGLSVQQVLAQLIAVGDQFHESRHRPWRPVLQSI
        MGNCLRRDGAA +WAGEEW  LA E  G             +  ATEVKIKITK+QLEELLGK D+K +SVQQVLAQLI VGDQFHESRHR WRPVLQSI
Subjt:  MGNCLRRDGAAERWAGEEWGFLAEEKQG--------SAAAPTAAATEVKIKITKKQLEELLGKADVKGLSVQQVLAQLIAVGDQFHESRHRPWRPVLQSI

Query:  PEMD
        PE+D
Subjt:  PEMD
XP_023536165.1 uncharacterized protein LOC111797410 [Cucurbita pepo subsp. pepo]3.2e-3070.19Show/hide
Query:  MGNCLRRDGAAERWAGEEWGFLAEEKQG--------SAAAPTAAATEVKIKITKKQLEELLGKADVKGLSVQQVLAQLIAVGDQFHESRHRPWRPVLQSI
        MGNC+RRDGAA +WAGEEW FLA E  G             + AATEVKIKITK+QLEELLGK D+K +SVQQVLAQLI V DQFHESRHR WRPVLQSI
Subjt:  MGNCLRRDGAAERWAGEEWGFLAEEKQG--------SAAAPTAAATEVKIKITKKQLEELLGKADVKGLSVQQVLAQLIAVGDQFHESRHRPWRPVLQSI

Query:  PEMD
        PE+D
Subjt:  PEMD
XP_038896531.1 uncharacterized protein LOC120084782 [Benincasa hispida]2.3e-2864.55Show/hide
Query:  MGNCLRRDGAAERWAGEEWGFLA--------------EEKQGSAAAPTAAATEVKIKITKKQLEELLGKADVKGLSVQQVLAQLIAVGDQFHESRHRPWR
        MGNCLRRD A  +WAGE+W FLA              E+K+ SAA  +  A  VKIKITK+QLEELLGK D+K +SVQQVLAQLI VGDQFHESRHR WR
Subjt:  MGNCLRRDGAAERWAGEEWGFLA--------------EEKQGSAAAPTAAATEVKIKITKKQLEELLGKADVKGLSVQQVLAQLIAVGDQFHESRHRPWR

Query:  PVLQSIPEMD
        PVLQ IPE+D
Subjt:  PVLQSIPEMD
TrEMBL top hitse value%identityAlignment
A0A067F5K7 Uncharacterized protein9.4e-2051.22Show/hide
Query:  MGNCLR-RDGAAERWAGEEWGFLAE-------------------EKQGSAAAPTAAA--TEVKIKITKKQLEELLGKADVKGLSVQQVLAQLIAV-----
        MGNC+R +   + +WAG++WG + E                   +K G   +PT+AA  TE+KIKITKKQLEELLGKADVKGLSVQQVLA LI V     
Subjt:  MGNCLR-RDGAAERWAGEEWGFLAE-------------------EKQGSAAAPTAAA--TEVKIKITKKQLEELLGKADVKGLSVQQVLAQLIAV-----

Query:  GDQFHESRHRPWRPVLQSIPEMD
         D++HE+  R WRP LQSIPE++
Subjt:  GDQFHESRHRPWRPVLQSIPEMD
A0A6J1CG88 uncharacterized protein LOC1110105267.7e-46100Show/hide
Query:  MGNCLRRDGAAERWAGEEWGFLAEEKQGSAAAPTAAATEVKIKITKKQLEELLGKADVKGLSVQQVLAQLIAVGDQFHESRHRPWRPVLQSIPEMD
        MGNCLRRDGAAERWAGEEWGFLAEEKQGSAAAPTAAATEVKIKITKKQLEELLGKADVKGLSVQQVLAQLIAVGDQFHESRHRPWRPVLQSIPEMD
Subjt:  MGNCLRRDGAAERWAGEEWGFLAEEKQGSAAAPTAAATEVKIKITKKQLEELLGKADVKGLSVQQVLAQLIAVGDQFHESRHRPWRPVLQSIPEMD
A0A6J1FD17 uncharacterized protein LOC1114428981.4e-3172.12Show/hide
Query:  MGNCLRRDGAAERWAGEEWGFLAEEKQG--------SAAAPTAAATEVKIKITKKQLEELLGKADVKGLSVQQVLAQLIAVGDQFHESRHRPWRPVLQSI
        MGNCLRRDGAA +WAGEEW FLA E  G             + AATEVKIKITK+QLEELLGK D+K +SVQQVLAQLI VGDQFHESRHR WRPVLQSI
Subjt:  MGNCLRRDGAAERWAGEEWGFLAEEKQG--------SAAAPTAAATEVKIKITKKQLEELLGKADVKGLSVQQVLAQLIAVGDQFHESRHRPWRPVLQSI

Query:  PEMD
        PE+D
Subjt:  PEMD
A0A6J1IHJ3 uncharacterized protein LOC1114759202.0e-3070.19Show/hide
Query:  MGNCLRRDGAAERWAGEEWGFLAEEKQG--------SAAAPTAAATEVKIKITKKQLEELLGKADVKGLSVQQVLAQLIAVGDQFHESRHRPWRPVLQSI
        MGNCLRRDGAA +WAGEEW  LA E  G             +  ATEVKIKITK+QLEELLGK D+K +SVQQVLAQLI VGDQFHESRHR WRPVLQSI
Subjt:  MGNCLRRDGAAERWAGEEWGFLAEEKQG--------SAAAPTAAATEVKIKITKKQLEELLGKADVKGLSVQQVLAQLIAVGDQFHESRHRPWRPVLQSI

Query:  PEMD
        PE+D
Subjt:  PEMD
V4TY97 Uncharacterized protein9.4e-2051.22Show/hide
Query:  MGNCLR-RDGAAERWAGEEWGFLAE-------------------EKQGSAAAPTAAA--TEVKIKITKKQLEELLGKADVKGLSVQQVLAQLIAV-----
        MGNC+R +   + +WAG++WG + E                   +K G   +PT+AA  TE+KIKITKKQLEELLGKADVKGLSVQQVLA LI V     
Subjt:  MGNCLR-RDGAAERWAGEEWGFLAE-------------------EKQGSAAAPTAAA--TEVKIKITKKQLEELLGKADVKGLSVQQVLAQLIAV-----

Query:  GDQFHESRHRPWRPVLQSIPEMD
         D++HE+  R WRP LQSIPE++
Subjt:  GDQFHESRHRPWRPVLQSIPEMD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G20340.1 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.2.3e-1034.48Show/hide
Query:  MGNCLRRDGAAERWAGEEWG-FLAEEKQG-----------------SAAAPTAAATEVKIKITKKQLEELLGKADVKGLSVQQVLAQLIAVGDQFHE--S
        MGNCLR + +   WAGE+W  F+ E+++                    +  +  + E+KI++TKKQL +LL K +V  L+ QQ       + ++ +E  +
Subjt:  MGNCLRRDGAAERWAGEEWG-FLAEEKQG-----------------SAAAPTAAATEVKIKITKKQLEELLGKADVKGLSVQQVLAQLIAVGDQFHE--S

Query:  RHRPWRPVLQSIPEMD
        + R WRPVLQSIPE++
Subjt:  RHRPWRPVLQSIPEMD
AT4G21920.1 unknown protein5.1e-1042.67Show/hide
Query:  SAAAPTAAATEVKIKITKKQLEELLGKADVKGLSVQQVLAQLI-AVGDQFHES------RHRPWRPVLQSIPEMD
        ++++ ++   E+KI+ITKK+LE+L+    +K L+ +++L++LI   GDQ   S       H+PW+PVLQSIPEMD
Subjt:  SAAAPTAAATEVKIKITKKQLEELLGKADVKGLSVQQVLAQLI-AVGDQFHES------RHRPWRPVLQSIPEMD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAACTGTCTACGGCGGGACGGGGCGGCGGAGCGGTGGGCCGGCGAGGAGTGGGGATTTTTGGCCGAGGAAAAGCAGGGCTCTGCGGCGGCGCCCACGGCGGCGGC
AACGGAGGTGAAGATCAAGATCACGAAGAAGCAGCTGGAGGAGCTGCTGGGGAAGGCGGATGTTAAGGGGCTGTCCGTACAGCAGGTTCTGGCTCAGTTGATCGCCGTCG
GCGACCAGTTTCACGAGTCTCGCCACCGGCCGTGGCGGCCGGTGTTGCAGAGCATCCCTGAAATGGAC
mRNA sequenceShow/hide mRNA sequence
ATGGGCAACTGTCTACGGCGGGACGGGGCGGCGGAGCGGTGGGCCGGCGAGGAGTGGGGATTTTTGGCCGAGGAAAAGCAGGGCTCTGCGGCGGCGCCCACGGCGGCGGC
AACGGAGGTGAAGATCAAGATCACGAAGAAGCAGCTGGAGGAGCTGCTGGGGAAGGCGGATGTTAAGGGGCTGTCCGTACAGCAGGTTCTGGCTCAGTTGATCGCCGTCG
GCGACCAGTTTCACGAGTCTCGCCACCGGCCGTGGCGGCCGGTGTTGCAGAGCATCCCTGAAATGGAC
Protein sequenceShow/hide protein sequence
MGNCLRRDGAAERWAGEEWGFLAEEKQGSAAAPTAAATEVKIKITKKQLEELLGKADVKGLSVQQVLAQLIAVGDQFHESRHRPWRPVLQSIPEMD