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MS008157 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008157
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAP-5 complex subunit zeta-1-like
Genome locationscaffold703:656495..660009
RNA-Seq ExpressionMS008157
SyntenyMS008157
Gene Ontology termsGO:0044599 - AP-5 adaptor complex (cellular component)
InterPro domainsIPR028222 - AP-5 complex subunit zeta-1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142556.1 AP-5 complex subunit zeta-1 [Cucumis sativus]3.8e-5495.65Show/hide
Query:  MVDRDRDWDFHLRNLSNSARDSNVANDPASDPNILQSVKRLYELCKAENSEDLVARVYPHFNKIFQRSVSSLSQSRTSNGLLLLAILQFFIDFGELVLHD
        MVDRDRDWDF+LR LSNSARDSNVANDPASDPNILQSVK+LYELCKAENSEDLVARVYP FNKIFQRSVSSLSQSRTSNGLLLLAILQFFIDFGE+VLHD
Subjt:  MVDRDRDWDFHLRNLSNSARDSNVANDPASDPNILQSVKRLYELCKAENSEDLVARVYPHFNKIFQRSVSSLSQSRTSNGLLLLAILQFFIDFGELVLHD

Query:  ADPSLKTFFRSCLSR
        ADPSLKTFFRSCLSR
Subjt:  ADPSLKTFFRSCLSR
XP_008454528.1 PREDICTED: AP-5 complex subunit zeta-1 isoform X1 [Cucumis melo]1.1e-5394.78Show/hide
Query:  MVDRDRDWDFHLRNLSNSARDSNVANDPASDPNILQSVKRLYELCKAENSEDLVARVYPHFNKIFQRSVSSLSQSRTSNGLLLLAILQFFIDFGELVLHD
        MVDRDRDWDFHLR LSNSARDSNVANDPASDPNIL SVK+LYELCKAENSEDLVARVYP F+KIFQRSVSSLSQSRTSNGLLLLAILQFFIDFGE+VLHD
Subjt:  MVDRDRDWDFHLRNLSNSARDSNVANDPASDPNILQSVKRLYELCKAENSEDLVARVYPHFNKIFQRSVSSLSQSRTSNGLLLLAILQFFIDFGELVLHD

Query:  ADPSLKTFFRSCLSR
        ADPSLKTFFRSCLSR
Subjt:  ADPSLKTFFRSCLSR
XP_022139677.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111010525 [Momordica charantia]3.7e-57100Show/hide
Query:  MVDRDRDWDFHLRNLSNSARDSNVANDPASDPNILQSVKRLYELCKAENSEDLVARVYPHFNKIFQRSVSSLSQSRTSNGLLLLAILQFFIDFGELVLHD
        MVDRDRDWDFHLRNLSNSARDSNVANDPASDPNILQSVKRLYELCKAENSEDLVARVYPHFNKIFQRSVSSLSQSRTSNGLLLLAILQFFIDFGELVLHD
Subjt:  MVDRDRDWDFHLRNLSNSARDSNVANDPASDPNILQSVKRLYELCKAENSEDLVARVYPHFNKIFQRSVSSLSQSRTSNGLLLLAILQFFIDFGELVLHD

Query:  ADPSLKTFFRSCLSR
        ADPSLKTFFRSCLSR
Subjt:  ADPSLKTFFRSCLSR
XP_022937396.1 AP-5 complex subunit zeta-1-like [Cucurbita moschata]7.2e-5393.91Show/hide
Query:  MVDRDRDWDFHLRNLSNSARDSNVANDPASDPNILQSVKRLYELCKAENSEDLVARVYPHFNKIFQRSVSSLSQSRTSNGLLLLAILQFFIDFGELVLHD
        MVDRD+DWDFHLR LSNSARDSN  NDPASDPNILQSVKRLYELCKAENSEDLVARVYP FNKIFQRSVSSLSQS TSNGLLLLAILQFFIDFGE+VLHD
Subjt:  MVDRDRDWDFHLRNLSNSARDSNVANDPASDPNILQSVKRLYELCKAENSEDLVARVYPHFNKIFQRSVSSLSQSRTSNGLLLLAILQFFIDFGELVLHD

Query:  ADPSLKTFFRSCLSR
        ADPSLKTFFRSCLSR
Subjt:  ADPSLKTFFRSCLSR
XP_038898300.1 AP-5 complex subunit zeta-1 [Benincasa hispida]2.2e-5496.52Show/hide
Query:  MVDRDRDWDFHLRNLSNSARDSNVANDPASDPNILQSVKRLYELCKAENSEDLVARVYPHFNKIFQRSVSSLSQSRTSNGLLLLAILQFFIDFGELVLHD
        MVDRDRDWDFHLR LSNSARDSNVANDPASDPNILQSVKRLYELCKAENSEDLVARVYP FNKIFQRSVSSLSQS TSNGLLLLAILQFFIDFGE+VLHD
Subjt:  MVDRDRDWDFHLRNLSNSARDSNVANDPASDPNILQSVKRLYELCKAENSEDLVARVYPHFNKIFQRSVSSLSQSRTSNGLLLLAILQFFIDFGELVLHD

Query:  ADPSLKTFFRSCLSR
        ADPSLKTFFRSCLSR
Subjt:  ADPSLKTFFRSCLSR
TrEMBL top hitse value%identityAlignment
A0A0A0M0N8 Uncharacterized protein1.8e-5495.65Show/hide
Query:  MVDRDRDWDFHLRNLSNSARDSNVANDPASDPNILQSVKRLYELCKAENSEDLVARVYPHFNKIFQRSVSSLSQSRTSNGLLLLAILQFFIDFGELVLHD
        MVDRDRDWDF+LR LSNSARDSNVANDPASDPNILQSVK+LYELCKAENSEDLVARVYP FNKIFQRSVSSLSQSRTSNGLLLLAILQFFIDFGE+VLHD
Subjt:  MVDRDRDWDFHLRNLSNSARDSNVANDPASDPNILQSVKRLYELCKAENSEDLVARVYPHFNKIFQRSVSSLSQSRTSNGLLLLAILQFFIDFGELVLHD

Query:  ADPSLKTFFRSCLSR
        ADPSLKTFFRSCLSR
Subjt:  ADPSLKTFFRSCLSR
A0A1S3BYC4 AP-5 complex subunit zeta-1 isoform X15.4e-5494.78Show/hide
Query:  MVDRDRDWDFHLRNLSNSARDSNVANDPASDPNILQSVKRLYELCKAENSEDLVARVYPHFNKIFQRSVSSLSQSRTSNGLLLLAILQFFIDFGELVLHD
        MVDRDRDWDFHLR LSNSARDSNVANDPASDPNIL SVK+LYELCKAENSEDLVARVYP F+KIFQRSVSSLSQSRTSNGLLLLAILQFFIDFGE+VLHD
Subjt:  MVDRDRDWDFHLRNLSNSARDSNVANDPASDPNILQSVKRLYELCKAENSEDLVARVYPHFNKIFQRSVSSLSQSRTSNGLLLLAILQFFIDFGELVLHD

Query:  ADPSLKTFFRSCLSR
        ADPSLKTFFRSCLSR
Subjt:  ADPSLKTFFRSCLSR
A0A6J1CEM6 LOW QUALITY PROTEIN: uncharacterized protein LOC1110105251.8e-57100Show/hide
Query:  MVDRDRDWDFHLRNLSNSARDSNVANDPASDPNILQSVKRLYELCKAENSEDLVARVYPHFNKIFQRSVSSLSQSRTSNGLLLLAILQFFIDFGELVLHD
        MVDRDRDWDFHLRNLSNSARDSNVANDPASDPNILQSVKRLYELCKAENSEDLVARVYPHFNKIFQRSVSSLSQSRTSNGLLLLAILQFFIDFGELVLHD
Subjt:  MVDRDRDWDFHLRNLSNSARDSNVANDPASDPNILQSVKRLYELCKAENSEDLVARVYPHFNKIFQRSVSSLSQSRTSNGLLLLAILQFFIDFGELVLHD

Query:  ADPSLKTFFRSCLSR
        ADPSLKTFFRSCLSR
Subjt:  ADPSLKTFFRSCLSR
A0A6J1FA84 AP-5 complex subunit zeta-1-like3.5e-5393.91Show/hide
Query:  MVDRDRDWDFHLRNLSNSARDSNVANDPASDPNILQSVKRLYELCKAENSEDLVARVYPHFNKIFQRSVSSLSQSRTSNGLLLLAILQFFIDFGELVLHD
        MVDRD+DWDFHLR LSNSARDSN  NDPASDPNILQSVKRLYELCKAENSEDLVARVYP FNKIFQRSVSSLSQS TSNGLLLLAILQFFIDFGE+VLHD
Subjt:  MVDRDRDWDFHLRNLSNSARDSNVANDPASDPNILQSVKRLYELCKAENSEDLVARVYPHFNKIFQRSVSSLSQSRTSNGLLLLAILQFFIDFGELVLHD

Query:  ADPSLKTFFRSCLSR
        ADPSLKTFFRSCLSR
Subjt:  ADPSLKTFFRSCLSR
A0A6J1INJ7 AP-5 complex subunit zeta-1-like2.9e-5293.04Show/hide
Query:  MVDRDRDWDFHLRNLSNSARDSNVANDPASDPNILQSVKRLYELCKAENSEDLVARVYPHFNKIFQRSVSSLSQSRTSNGLLLLAILQFFIDFGELVLHD
        MVDRD+DWD HLR LSNSARDSN  NDPASDPNILQSVKRLYELCKAENSEDLVARVYP FNKIFQRSVSSLSQS TSNGLLLLAILQFFIDFGE+VLHD
Subjt:  MVDRDRDWDFHLRNLSNSARDSNVANDPASDPNILQSVKRLYELCKAENSEDLVARVYPHFNKIFQRSVSSLSQSRTSNGLLLLAILQFFIDFGELVLHD

Query:  ADPSLKTFFRSCLSR
        ADPSLKTFFRSCLSR
Subjt:  ADPSLKTFFRSCLSR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G15160.1 unknown protein1.0e-4171.79Show/hide
Query:  MVDRDRDWDFHLRNLSNSARDSNVANDPASDPNILQSVKRLYELCKAENSEDLVARVYPHFNKIFQRSVSSLSQSRT--SNGLLLLAILQFFIDFGELVL
        M D++ DWDF+LR LSNSARDS    DPASDP+ILQSVK+L+  CK E S+DLVAR+YP FNK+F RSV+SLSQS +  S GLLLLAILQFF+DFG++VL
Subjt:  MVDRDRDWDFHLRNLSNSARDSNVANDPASDPNILQSVKRLYELCKAENSEDLVARVYPHFNKIFQRSVSSLSQSRT--SNGLLLLAILQFFIDFGELVL

Query:  HDADPSLKTFFRSCLSR
        HD+DPSL+TFFRSCLSR
Subjt:  HDADPSLKTFFRSCLSR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGATCGAGACCGGGATTGGGATTTTCATCTCAGAAATTTATCCAACAGCGCCAGAGACTCGAATGTCGCAAACGATCCCGCTTCCGATCCTAATATTCTCCAATC
AGTTAAAAGGCTATATGAATTGTGCAAAGCTGAGAATTCTGAGGATTTGGTGGCTCGGGTGTATCCTCACTTTAACAAGATTTTTCAGCGTTCGGTATCGTCCCTGTCTC
AATCTAGAACTTCTAATGGCCTCCTCTTATTGGCCATTCTTCAATTTTTCATTGACTTTGGTGAATTGGTCTTACATGATGCTGATCCCAGTCTGAAGACATTCTTCCGT
TCATGTTTGAGCCGG
mRNA sequenceShow/hide mRNA sequence
ATGGTGGATCGAGACCGGGATTGGGATTTTCATCTCAGAAATTTATCCAACAGCGCCAGAGACTCGAATGTCGCAAACGATCCCGCTTCCGATCCTAATATTCTCCAATC
AGTTAAAAGGCTATATGAATTGTGCAAAGCTGAGAATTCTGAGGATTTGGTGGCTCGGGTGTATCCTCACTTTAACAAGATTTTTCAGCGTTCGGTATCGTCCCTGTCTC
AATCTAGAACTTCTAATGGCCTCCTCTTATTGGCCATTCTTCAATTTTTCATTGACTTTGGTGAATTGGTCTTACATGATGCTGATCCCAGTCTGAAGACATTCTTCCGT
TCATGTTTGAGCCGG
Protein sequenceShow/hide protein sequence
MVDRDRDWDFHLRNLSNSARDSNVANDPASDPNILQSVKRLYELCKAENSEDLVARVYPHFNKIFQRSVSSLSQSRTSNGLLLLAILQFFIDFGELVLHDADPSLKTFFR
SCLSR