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MS008158 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008158
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAP-5 complex subunit zeta-1-like
Genome locationscaffold703:663947..665184
RNA-Seq ExpressionMS008158
SyntenyMS008158
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0044599 - AP-5 adaptor complex (cellular component)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_009342587.1 PREDICTED: AP-5 complex subunit zeta-1-like isoform X1 [Pyrus x bretschneideri]4.8e-3371.96Show/hide
Query:  MDEAYTGSTIGDAGGDSESEDSSRIDVADPLFLELLEDENDGLSERHWTSPVMAAVLQTAINTP-SVRLKQILNMTPRILDVYFSVALQEVNNCMMLLWV
        MDEAYTGSTIGD GGDSESEDSS IDVADPLFL+LL+DENDG++ERHWTSP MAA LQT INTP S RLK IL MTPR LDVYF++AL++VNN ++   +
Subjt:  MDEAYTGSTIGDAGGDSESEDSSRIDVADPLFLELLEDENDGLSERHWTSPVMAAVLQTAINTP-SVRLKQILNMTPRILDVYFSVALQEVNNCMMLLWV

Query:  IAFRSEN
            S N
Subjt:  IAFRSEN

XP_009358126.2 PREDICTED: AP-5 complex subunit zeta-1-like [Pyrus x bretschneideri]1.8e-3271.03Show/hide
Query:  MDEAYTGSTIGDAGGDSESEDSSRIDVADPLFLELLEDENDGLSERHWTSPVMAAVLQTAINTP-SVRLKQILNMTPRILDVYFSVALQEVNNCMMLLWV
        MDEAYTGSTIGD GGDSESEDSS IDVADPLFL+LL+DENDG++ERHWTSP MAA LQ  INTP S RLK IL MTPR LDVYF++AL++VNN ++   +
Subjt:  MDEAYTGSTIGDAGGDSESEDSSRIDVADPLFLELLEDENDGLSERHWTSPVMAAVLQTAINTP-SVRLKQILNMTPRILDVYFSVALQEVNNCMMLLWV

Query:  IAFRSEN
            S N
Subjt:  IAFRSEN

XP_018499854.1 PREDICTED: AP-5 complex subunit zeta-1-like isoform X2 [Pyrus x bretschneideri]4.8e-3371.96Show/hide
Query:  MDEAYTGSTIGDAGGDSESEDSSRIDVADPLFLELLEDENDGLSERHWTSPVMAAVLQTAINTP-SVRLKQILNMTPRILDVYFSVALQEVNNCMMLLWV
        MDEAYTGSTIGD GGDSESEDSS IDVADPLFL+LL+DENDG++ERHWTSP MAA LQT INTP S RLK IL MTPR LDVYF++AL++VNN ++   +
Subjt:  MDEAYTGSTIGDAGGDSESEDSSRIDVADPLFLELLEDENDGLSERHWTSPVMAAVLQTAINTP-SVRLKQILNMTPRILDVYFSVALQEVNNCMMLLWV

Query:  IAFRSEN
            S N
Subjt:  IAFRSEN

XP_022139677.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111010525 [Momordica charantia]2.5e-4289.62Show/hide
Query:  MDEAYTGSTIGDAGGDSESEDSSRIDVADPLFLELLEDENDGLSERHWTSPVMAAVLQTAINTPSVRLKQILNMTPRILDVYFSVALQEVNNCMMLLWVI
        MDEAYTGSTIGDAGGDSESEDSSRIDVADPLFLELLEDENDGLSERHWTSPVMAAVLQTAINTPSVRLKQILNMTPRILDVYFSVALQEVNN ++   V 
Subjt:  MDEAYTGSTIGDAGGDSESEDSSRIDVADPLFLELLEDENDGLSERHWTSPVMAAVLQTAINTPSVRLKQILNMTPRILDVYFSVALQEVNNCMMLLWVI

Query:  AFRSEN
           S N
Subjt:  AFRSEN

XP_038898300.1 AP-5 complex subunit zeta-1 [Benincasa hispida]2.8e-3372.97Show/hide
Query:  MDEAYTGSTIGDAGGDSESEDSSRIDVADPLFLELLEDENDGLSERHWTSPVMAAVLQTAINT-PSVRLKQILNMTPRILDVYFSVALQEVNNCMMLLWV
        MDEAYTGSTIGD GGDSESEDSS +DVADPLFLELL+DENDGLSERHW SP M AV++TA+NT  S RLK++LNMTPRILDVYFSVAL+EVNN ++   +
Subjt:  MDEAYTGSTIGDAGGDSESEDSSRIDVADPLFLELLEDENDGLSERHWTSPVMAAVLQTAINT-PSVRLKQILNMTPRILDVYFSVALQEVNNCMMLLWV

Query:  IAFRSEN-VLF
            S N +LF
Subjt:  IAFRSEN-VLF

TrEMBL top hitse value%identityAlignment
A0A061F629 Peptidase A1 domain-containing protein8.8e-3371.03Show/hide
Query:  MDEAYTGSTIGDAGGDSESEDSSRIDVADPLFLELLEDENDGLSERHWTSPVMAAVLQTAINTP-SVRLKQILNMTPRILDVYFSVALQEVNNCMMLLWV
        MDEAYTGSTIGD GGDSESEDSS IDVADPLFLELL+DENDGL+ERHWTSP +AAVLQ AIN+P S RLKQILNM PR+LD+YF++AL++ NN ++   +
Subjt:  MDEAYTGSTIGDAGGDSESEDSSRIDVADPLFLELLEDENDGLSERHWTSPVMAAVLQTAINTP-SVRLKQILNMTPRILDVYFSVALQEVNNCMMLLWV

Query:  IAFRSEN
            + N
Subjt:  IAFRSEN

A0A314YQL1 Uncharacterized protein1.2e-3271.96Show/hide
Query:  MDEAYTGSTIGDAGGDSESEDSSRIDVADPLFLELLEDENDGLSERHWTSPVMAAVLQTAINTP-SVRLKQILNMTPRILDVYFSVALQEVNNCMMLLWV
        MDEAYTGSTIGD GGDSESEDSS IDVADPLFL+LL+DENDG++ERHWTSP MAA LQ AINTP S RLK IL M PR LDVYFS+AL++VNN ++   +
Subjt:  MDEAYTGSTIGDAGGDSESEDSSRIDVADPLFLELLEDENDGLSERHWTSPVMAAVLQTAINTP-SVRLKQILNMTPRILDVYFSVALQEVNNCMMLLWV

Query:  IAFRSEN
            S N
Subjt:  IAFRSEN

A0A5N5GJH1 AP-5 complex subunit zeta-1-like1.2e-3271.03Show/hide
Query:  MDEAYTGSTIGDAGGDSESEDSSRIDVADPLFLELLEDENDGLSERHWTSPVMAAVLQTAINTP-SVRLKQILNMTPRILDVYFSVALQEVNNCMMLLWV
        MDEAYTGSTIGD GGDSESEDSS IDVADPLFL+LL+DENDG++ERHWTSP MAA LQ  INTP S RLK IL MTPR LDVYF++AL++VNN ++   +
Subjt:  MDEAYTGSTIGDAGGDSESEDSSRIDVADPLFLELLEDENDGLSERHWTSPVMAAVLQTAINTP-SVRLKQILNMTPRILDVYFSVALQEVNNCMMLLWV

Query:  IAFRSEN
            S N
Subjt:  IAFRSEN

A0A6J1CEM6 LOW QUALITY PROTEIN: uncharacterized protein LOC1110105251.2e-4289.62Show/hide
Query:  MDEAYTGSTIGDAGGDSESEDSSRIDVADPLFLELLEDENDGLSERHWTSPVMAAVLQTAINTPSVRLKQILNMTPRILDVYFSVALQEVNNCMMLLWVI
        MDEAYTGSTIGDAGGDSESEDSSRIDVADPLFLELLEDENDGLSERHWTSPVMAAVLQTAINTPSVRLKQILNMTPRILDVYFSVALQEVNN ++   V 
Subjt:  MDEAYTGSTIGDAGGDSESEDSSRIDVADPLFLELLEDENDGLSERHWTSPVMAAVLQTAINTPSVRLKQILNMTPRILDVYFSVALQEVNNCMMLLWVI

Query:  AFRSEN
           S N
Subjt:  AFRSEN

A0A6P5RXQ1 AP-5 complex subunit zeta-11.2e-3271.96Show/hide
Query:  MDEAYTGSTIGDAGGDSESEDSSRIDVADPLFLELLEDENDGLSERHWTSPVMAAVLQTAINTP-SVRLKQILNMTPRILDVYFSVALQEVNNCMMLLWV
        MDEAYTGSTIGD GGDSESEDSS IDVADPLFL+LL+DENDG++ERHWTSP MAA LQ AINTP S RLK IL M PR LDVYFS+AL++VNN ++   +
Subjt:  MDEAYTGSTIGDAGGDSESEDSSRIDVADPLFLELLEDENDGLSERHWTSPVMAAVLQTAINTP-SVRLKQILNMTPRILDVYFSVALQEVNNCMMLLWV

Query:  IAFRSEN
            S N
Subjt:  IAFRSEN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G15160.1 unknown protein1.7e-2859.81Show/hide
Query:  MDEAYTGSTIGDAGGDSESEDSSRIDVADPLFLELLEDENDGLSERHWTSPVMAAVLQTAINTP-SVRLKQILNMTPRILDVYFSVALQEVNNCMMLLWV
        MDEAYTGSTIGD G DSESED++ IDVADPLFLELL+DENDGL+ERH  SP + A LQ A + P S R+KQ L + PR+LDVYFSV L++ N+ ++   +
Subjt:  MDEAYTGSTIGDAGGDSESEDSSRIDVADPLFLELLEDENDGLSERHWTSPVMAAVLQTAINTP-SVRLKQILNMTPRILDVYFSVALQEVNNCMMLLWV

Query:  IAFRSEN
            + N
Subjt:  IAFRSEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAGGCTTACACTGGTTCAACCATCGGGGATGCAGGGGGAGACTCTGAATCTGAGGACAGCAGCAGAATAGATGTAGCTGATCCTCTCTTCTTAGAACTTTTGGA
GGATGAAAATGATGGTCTTTCTGAACGACATTGGACTTCTCCTGTGATGGCTGCAGTATTGCAGACCGCAATAAATACTCCATCTGTTAGGCTGAAACAAATACTGAACA
TGACACCTCGGATTCTTGATGTGTACTTTTCCGTTGCACTGCAAGAGGTTAACAATTGTATGATGTTGCTTTGGGTGATTGCCTTTAGATCTGAGAATGTCTTATTCATT
TTGTATCTTCAT
mRNA sequenceShow/hide mRNA sequence
ATGGATGAGGCTTACACTGGTTCAACCATCGGGGATGCAGGGGGAGACTCTGAATCTGAGGACAGCAGCAGAATAGATGTAGCTGATCCTCTCTTCTTAGAACTTTTGGA
GGATGAAAATGATGGTCTTTCTGAACGACATTGGACTTCTCCTGTGATGGCTGCAGTATTGCAGACCGCAATAAATACTCCATCTGTTAGGCTGAAACAAATACTGAACA
TGACACCTCGGATTCTTGATGTGTACTTTTCCGTTGCACTGCAAGAGGTTAACAATTGTATGATGTTGCTTTGGGTGATTGCCTTTAGATCTGAGAATGTCTTATTCATT
TTGTATCTTCAT
Protein sequenceShow/hide protein sequence
MDEAYTGSTIGDAGGDSESEDSSRIDVADPLFLELLEDENDGLSERHWTSPVMAAVLQTAINTPSVRLKQILNMTPRILDVYFSVALQEVNNCMMLLWVIAFRSENVLFI
LYLH