; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS008160 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008160
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionVascular-related unknown protein 2
Genome locationscaffold703:691595..692497
RNA-Seq ExpressionMS008160
SyntenyMS008160
Gene Ontology termsGO:0010089 - xylem development (biological process)
InterPro domainsIPR039280 - VASCULAR-RELATED UNKNOWN PROTEIN


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022139703.1 uncharacterized protein LOC111010550 [Momordica charantia]1.1e-5798.36Show/hide
Query:  MAKSNSTNNSQISCSRGRDRSDDGDRSPEESGWTIYFEDFLNSSDHQQLSSFSSDGVAPDDQPHVAPDAASSVVGDNDVAAPGLSCKVMNGFKKRRMMIK
        MAKSNSTNNSQISCSRGRDRS DGDRSPEESGWTIYFEDFLNSSDHQQLSSFSSDGVAPDDQPHVAPDAASSVVGDNDVA PGLSCKVMNGFKKRRMMIK
Subjt:  MAKSNSTNNSQISCSRGRDRSDDGDRSPEESGWTIYFEDFLNSSDHQQLSSFSSDGVAPDDQPHVAPDAASSVVGDNDVAAPGLSCKVMNGFKKRRMMIK

Query:  EVFVEDESLEDTASSPVNSPKV
        EVFVEDESLEDTASSPVNSPKV
Subjt:  EVFVEDESLEDTASSPVNSPKV

XP_022937320.1 vascular-related unknown protein 4-like isoform X1 [Cucurbita moschata]9.4e-3660Show/hide
Query:  GDRSPEESGWTIYFEDFLNS--SDHQQLSSFSSDGVAPDDQPHVAPDAASSVVG-----DNDVAA--PGLSCKVMNGFKKRRMMIKEVFVEDESLEDTAS
        GD+S EESGWTIYFEDFLN+    +Q  +SFSS  ++P DQ +   DAASSVV      ++D AA  PG SCK    F K+R MI EVFV+DE+LEDTAS
Subjt:  GDRSPEESGWTIYFEDFLNS--SDHQQLSSFSSDGVAPDDQPHVAPDAASSVVG-----DNDVAA--PGLSCKVMNGFKKRRMMIKEVFVEDESLEDTAS

Query:  SPVNSPKVPESTYFSKNQKHKENLITPQVEERSREMD-----CEYTQLKKRGLCLVPLSMVVNYL
        SPVNSPKV +S YFSKN +HK  LITPQV ER    D      EYT+LKKRGLCLVP SM++NY+
Subjt:  SPVNSPKVPESTYFSKNQKHKENLITPQVEERSREMD-----CEYTQLKKRGLCLVPLSMVVNYL

XP_022976591.1 vascular-related unknown protein 4-like isoform X1 [Cucurbita maxima]1.6e-3559.39Show/hide
Query:  GDRSPEESGWTIYFEDFLNS--SDHQQLSSFSSDGVAPDDQPHVAPDAASSVV-----GDNDVAA--PGLSCKVMNGFKKRRMMIKEVFVEDESLEDTAS
        GD+S EESGWTIYFEDFLN+    +Q  +SFSS   +P DQ +   DAASSVV     G++D AA  PG SCK    F K+R MI E+ V+DE+LEDTAS
Subjt:  GDRSPEESGWTIYFEDFLNS--SDHQQLSSFSSDGVAPDDQPHVAPDAASSVV-----GDNDVAA--PGLSCKVMNGFKKRRMMIKEVFVEDESLEDTAS

Query:  SPVNSPKVPESTYFSKNQKHKENLITPQVEERSREMD-----CEYTQLKKRGLCLVPLSMVVNYL
        SPVNSPKV +S YFSKN +HK  LITPQV+ER    D      EYT+LKKRGLCLVP SM++NY+
Subjt:  SPVNSPKVPESTYFSKNQKHKENLITPQVEERSREMD-----CEYTQLKKRGLCLVPLSMVVNYL

XP_031739077.1 vascular-related unknown protein 4 [Cucumis sativus]1.2e-3554.31Show/hide
Query:  MAKSNSTNNSQISCSRGRDRSDDGDRSPEESGWTIYFEDFLN----SSDHQQLSSFSSDGVAPDDQPHVAPDAASSVV--------GDNDVAAPGLSCK-
        MA  NSTNN+ ++          G+ SPE+SGWTIYFEDFLN    +S +Q L+SFS+      D      DAASSV          D     PG   K 
Subjt:  MAKSNSTNNSQISCSRGRDRSDDGDRSPEESGWTIYFEDFLN----SSDHQQLSSFSSDGVAPDDQPHVAPDAASSVV--------GDNDVAAPGLSCK-

Query:  --VMNGFKKRRMMIKEVFVEDESLEDTASSPVNSPKVPESTYFSKNQKHKENLITPQVEERSREMD------CEYTQLKKRGLCLVPLSMVVNYLAE
           +N FKKR+ MIKE+FV+DE+LEDTASSPVNSPK+  STYFSKNQKH++NLI P+VEER REMD       +YT+LKKRGLCLVPLSMV+NYL +
Subjt:  --VMNGFKKRRMMIKEVFVEDESLEDTASSPVNSPKVPESTYFSKNQKHKENLITPQVEERSREMD------CEYTQLKKRGLCLVPLSMVVNYLAE

XP_038899309.1 vascular-related unknown protein 4-like isoform X1 [Benincasa hispida]2.2e-4060.53Show/hide
Query:  MAKSNSTNNSQISCSRGRDRSDDGDRSPEESGWTIYFEDFLNS--SDHQQLSSFSSDGVAPDDQPHVAPDAASSVVG-----DNDVAA--PGLSCKVMNG
        MAK NSTN+S             GD SPEESGWTIYFEDFLN+  S HQ  +SFSS   +  DQ +   DAASSV       DND AA  PG   K    
Subjt:  MAKSNSTNNSQISCSRGRDRSDDGDRSPEESGWTIYFEDFLNS--SDHQQLSSFSSDGVAPDDQPHVAPDAASSVVG-----DNDVAA--PGLSCKVMNG

Query:  FKKRRMMIKEVFVEDESLEDTASSPVNSPKVPESTYFSKNQKHKENLITPQVEERSR-----EMDCEYTQLKKRGLCLVPLSMVVNYLAE
        F K+R MIKE+FVEDE+LEDTASSPVNSPKV +STYFSKNQKHKENL TP+V+ER        M  +Y +LKKRGLCLVPLSMVVNY AE
Subjt:  FKKRRMMIKEVFVEDESLEDTASSPVNSPKVPESTYFSKNQKHKENLITPQVEERSR-----EMDCEYTQLKKRGLCLVPLSMVVNYLAE

TrEMBL top hitse value%identityAlignment
A0A6J1CGB1 uncharacterized protein LOC1110105505.5e-5898.36Show/hide
Query:  MAKSNSTNNSQISCSRGRDRSDDGDRSPEESGWTIYFEDFLNSSDHQQLSSFSSDGVAPDDQPHVAPDAASSVVGDNDVAAPGLSCKVMNGFKKRRMMIK
        MAKSNSTNNSQISCSRGRDRS DGDRSPEESGWTIYFEDFLNSSDHQQLSSFSSDGVAPDDQPHVAPDAASSVVGDNDVA PGLSCKVMNGFKKRRMMIK
Subjt:  MAKSNSTNNSQISCSRGRDRSDDGDRSPEESGWTIYFEDFLNSSDHQQLSSFSSDGVAPDDQPHVAPDAASSVVGDNDVAAPGLSCKVMNGFKKRRMMIK

Query:  EVFVEDESLEDTASSPVNSPKV
        EVFVEDESLEDTASSPVNSPKV
Subjt:  EVFVEDESLEDTASSPVNSPKV

A0A6J1FG95 Uncharacterized protein4.5e-3660Show/hide
Query:  GDRSPEESGWTIYFEDFLNS--SDHQQLSSFSSDGVAPDDQPHVAPDAASSVVG-----DNDVAA--PGLSCKVMNGFKKRRMMIKEVFVEDESLEDTAS
        GD+S EESGWTIYFEDFLN+    +Q  +SFSS  ++P DQ +   DAASSVV      ++D AA  PG SCK    F K+R MI EVFV+DE+LEDTAS
Subjt:  GDRSPEESGWTIYFEDFLNS--SDHQQLSSFSSDGVAPDDQPHVAPDAASSVVG-----DNDVAA--PGLSCKVMNGFKKRRMMIKEVFVEDESLEDTAS

Query:  SPVNSPKVPESTYFSKNQKHKENLITPQVEERSREMD-----CEYTQLKKRGLCLVPLSMVVNYL
        SPVNSPKV +S YFSKN +HK  LITPQV ER    D      EYT+LKKRGLCLVP SM++NY+
Subjt:  SPVNSPKVPESTYFSKNQKHKENLITPQVEERSREMD-----CEYTQLKKRGLCLVPLSMVVNYL

A0A6J1FLD8 Uncharacterized protein5.5e-3455.32Show/hide
Query:  MAKSNSTNNSQISCSRGRDRSDDGDRSPEESGWTIYFEDFLNSSDHQQLSSFSSDGVAPDDQPHVAPDAASSVV-----GDNDVAA--PGLSCKVMNGFK
        MAK NST+NS             GD+SPEESGWTIYF+DFLN++      + SS   +PD    VA DAASS+      GD++ AA  P LSCK      
Subjt:  MAKSNSTNNSQISCSRGRDRSDDGDRSPEESGWTIYFEDFLNSSDHQQLSSFSSDGVAPDDQPHVAPDAASSVV-----GDNDVAA--PGLSCKVMNGFK

Query:  KRRMMIKEVFVEDESLEDTASSPVNSPKVPESTYFSKNQKHKENLITPQVEERSREMDC-----EYTQLKKRGLCLVPLSMVVNYLAE
        KRR MIKE+ VEDE+LEDTASSPVNSPKV ++T+FSKN  H EN I  +V ER REM       EY +LKKRGLCLVPL MV+NYLA+
Subjt:  KRRMMIKEVFVEDESLEDTASSPVNSPKVPESTYFSKNQKHKENLITPQVEERSREMDC-----EYTQLKKRGLCLVPLSMVVNYLAE

A0A6J1IHA8 Uncharacterized protein7.7e-3659.39Show/hide
Query:  GDRSPEESGWTIYFEDFLNS--SDHQQLSSFSSDGVAPDDQPHVAPDAASSVV-----GDNDVAA--PGLSCKVMNGFKKRRMMIKEVFVEDESLEDTAS
        GD+S EESGWTIYFEDFLN+    +Q  +SFSS   +P DQ +   DAASSVV     G++D AA  PG SCK    F K+R MI E+ V+DE+LEDTAS
Subjt:  GDRSPEESGWTIYFEDFLNS--SDHQQLSSFSSDGVAPDDQPHVAPDAASSVV-----GDNDVAA--PGLSCKVMNGFKKRRMMIKEVFVEDESLEDTAS

Query:  SPVNSPKVPESTYFSKNQKHKENLITPQVEERSREMD-----CEYTQLKKRGLCLVPLSMVVNYL
        SPVNSPKV +S YFSKN +HK  LITPQV+ER    D      EYT+LKKRGLCLVP SM++NY+
Subjt:  SPVNSPKVPESTYFSKNQKHKENLITPQVEERSREMD-----CEYTQLKKRGLCLVPLSMVVNYL

A0A6J1J018 Uncharacterized protein4.2e-3454.45Show/hide
Query:  MAKSNSTNNSQISCSRGRDRSDDGDRSPEESGWTIYFEDFLNSSDHQQLSSF---SSDGVAPDDQPHVAPDAASSVV-----GDND--VAAPGLSCKVMN
        MAK NST+NS             G++SPEESGWTIYF+DFLN++ +   + +   SS  ++PD    VA DAASS+      GDND  V  P LSCK   
Subjt:  MAKSNSTNNSQISCSRGRDRSDDGDRSPEESGWTIYFEDFLNSSDHQQLSSF---SSDGVAPDDQPHVAPDAASSVV-----GDND--VAAPGLSCKVMN

Query:  GFKKRRMMIKEVFVEDESLEDTASSPVNSPKVPESTYFSKNQKHKENLITPQVEERSREM-----DCEYTQLKKRGLCLVPLSMVVNYLAE
           KRR MIKE+ VEDE+LEDTASSPVNSPKV +ST+FSK+ +H EN I  +V ER REM     + EY +LKKRGLCLVPL MV+NYLA+
Subjt:  GFKKRRMMIKEVFVEDESLEDTASSPVNSPKVPESTYFSKNQKHKENLITPQVEERSREM-----DCEYTQLKKRGLCLVPLSMVVNYLAE

SwissProt top hitse value%identityAlignment
Q5BPG5 Vascular-related unknown protein 43.5e-0934.48Show/hide
Query:  STNNSQISCSRGRDRSDDGDRSPEESGWTIYFEDFLN-SSDHQQLSSFSSDGVAPDDQPHVAPDAASSVVGDNDVAAPGLSCKVMNGFKKRRMMIKEV-F
        S+ N+    S+        D++PEES WT+YFEDF   SS    +  FSS  V+         DAAS V     +    +S +  +    +R   +E+ F
Subjt:  STNNSQISCSRGRDRSDDGDRSPEESGWTIYFEDFLN-SSDHQQLSSFSSDGVAPDDQPHVAPDAASSVVGDNDVAAPGLSCKVMNGFKKRRMMIKEV-F

Query:  VEDESLEDTASSPVNSPKVPESTYFSKNQKHKENLITPQVEERSREMDCE---YTQLKKRGLCLVPLSMVVNYL
             LEDTASSP  SP V        N       I    E+R   +  +      LKK+GLCLVPLSMV N+L
Subjt:  VEDESLEDTASSPVNSPKVPESTYFSKNQKHKENLITPQVEERSREMDCE---YTQLKKRGLCLVPLSMVVNYL

Q9C6I7 Vascular-related unknown protein 25.8e-0430.46Show/hide
Query:  NSTNN--SQISCSRGRDRSDDGDRSPEESGWTIYFEDFLNSSDHQQLSSFSSDGVAPDDQPHVAPDAASSV--VGDNDVAAPGLSCKVMNGFKKRRMMIK
        NS NN   Q   S  + R    +   EES W +YFED     D + + +        D+   +  DAAS V     N+V     +  +    KKRR++ +
Subjt:  NSTNN--SQISCSRGRDRSDDGDRSPEESGWTIYFEDFLNSSDHQQLSSFSSDGVAPDDQPHVAPDAASSV--VGDNDVAAPGLSCKVMNGFKKRRMMIK

Query:  EVFVEDESL----------EDTASSPVNSPKV-------PESTYFSKNQ----KHKENLITPQVEERSREMDCEYT-QLKKRGLCLVPLSMVVNYLA
            E+E L          EDTASSP N  K+        ++T + K        +   IT    +    M+ E++ +LKKRGLC+VPLSM+ N++A
Subjt:  EVFVEDESL----------EDTASSPVNSPKV-------PESTYFSKNQ----KHKENLITPQVEERSREMDCEYT-QLKKRGLCLVPLSMVVNYLA

Q9LSZ3 Vascular-related unknown protein 11.2e-0628.65Show/hide
Query:  DRSDDGDRSPEESGWTIYFEDFLN--------SSDHQQLSSFSSDGVAPDDQPHVAPDAASSVVGDNDVAAPGLSCKVMNGFKKRRMMIKEVFVEDESLE
        D    G    EESGWT Y +DF N         +DHQ  SS+S    +      +  DAA+               K+  G    R   K++  ED+SLE
Subjt:  DRSDDGDRSPEESGWTIYFEDFLN--------SSDHQQLSSFSSDGVAPDDQPHVAPDAASSVVGDNDVAAPGLSCKVMNGFKKRRMMIKEVFVEDESLE

Query:  DTASSPVNSPKVPESTYFSKNQKHKENLITP---------------QVEERSREM--------------DCEYTQLKKRGLCLVPLSMVVNY
        DTASSPVNSPKV    +     +  E+ ++                Q++E   +               +     L+ RGLC+VP+SM+ N+
Subjt:  DTASSPVNSPKVPESTYFSKNQKHKENLITP---------------QVEERSREM--------------DCEYTQLKKRGLCLVPLSMVVNY

Arabidopsis top hitse value%identityAlignment
AT1G50930.1 unknown protein4.1e-0530.46Show/hide
Query:  NSTNN--SQISCSRGRDRSDDGDRSPEESGWTIYFEDFLNSSDHQQLSSFSSDGVAPDDQPHVAPDAASSV--VGDNDVAAPGLSCKVMNGFKKRRMMIK
        NS NN   Q   S  + R    +   EES W +YFED     D + + +        D+   +  DAAS V     N+V     +  +    KKRR++ +
Subjt:  NSTNN--SQISCSRGRDRSDDGDRSPEESGWTIYFEDFLNSSDHQQLSSFSSDGVAPDDQPHVAPDAASSV--VGDNDVAAPGLSCKVMNGFKKRRMMIK

Query:  EVFVEDESL----------EDTASSPVNSPKV-------PESTYFSKNQ----KHKENLITPQVEERSREMDCEYT-QLKKRGLCLVPLSMVVNYLA
            E+E L          EDTASSP N  K+        ++T + K        +   IT    +    M+ E++ +LKKRGLC+VPLSM+ N++A
Subjt:  EVFVEDESL----------EDTASSPVNSPKV-------PESTYFSKNQ----KHKENLITPQVEERSREMDCEYT-QLKKRGLCLVPLSMVVNYLA

AT3G21710.1 unknown protein6.3e-0635.11Show/hide
Query:  DRSDDGDRSPEESGWTIYFEDFLN--------SSDHQQLSSFSSDGVAPDDQPHVAPDAASSVVGDNDVAAPGLSCKVMNGFKKRRMMIKEVFVEDESLE
        D    G    EESGWT Y +DF N         +DHQ  SS+S    +      +  DAA+               K+  G    R   K++  ED+SLE
Subjt:  DRSDDGDRSPEESGWTIYFEDFLN--------SSDHQQLSSFSSDGVAPDDQPHVAPDAASSVVGDNDVAAPGLSCKVMNGFKKRRMMIKEVFVEDESLE

Query:  DTASSPVNSPKVPESTYFSKNQKHKENLITP
        DTASSPVNSPKV           H E++ TP
Subjt:  DTASSPVNSPKVPESTYFSKNQKHKENLITP

AT3G21710.2 unknown protein8.8e-0828.65Show/hide
Query:  DRSDDGDRSPEESGWTIYFEDFLN--------SSDHQQLSSFSSDGVAPDDQPHVAPDAASSVVGDNDVAAPGLSCKVMNGFKKRRMMIKEVFVEDESLE
        D    G    EESGWT Y +DF N         +DHQ  SS+S    +      +  DAA+               K+  G    R   K++  ED+SLE
Subjt:  DRSDDGDRSPEESGWTIYFEDFLN--------SSDHQQLSSFSSDGVAPDDQPHVAPDAASSVVGDNDVAAPGLSCKVMNGFKKRRMMIKEVFVEDESLE

Query:  DTASSPVNSPKVPESTYFSKNQKHKENLITP---------------QVEERSREM--------------DCEYTQLKKRGLCLVPLSMVVNY
        DTASSPVNSPKV    +     +  E+ ++                Q++E   +               +     L+ RGLC+VP+SM+ N+
Subjt:  DTASSPVNSPKVPESTYFSKNQKHKENLITP---------------QVEERSREM--------------DCEYTQLKKRGLCLVPLSMVVNY

AT5G54790.1 unknown protein2.5e-1034.48Show/hide
Query:  STNNSQISCSRGRDRSDDGDRSPEESGWTIYFEDFLN-SSDHQQLSSFSSDGVAPDDQPHVAPDAASSVVGDNDVAAPGLSCKVMNGFKKRRMMIKEV-F
        S+ N+    S+        D++PEES WT+YFEDF   SS    +  FSS  V+         DAAS V     +    +S +  +    +R   +E+ F
Subjt:  STNNSQISCSRGRDRSDDGDRSPEESGWTIYFEDFLN-SSDHQQLSSFSSDGVAPDDQPHVAPDAASSVVGDNDVAAPGLSCKVMNGFKKRRMMIKEV-F

Query:  VEDESLEDTASSPVNSPKVPESTYFSKNQKHKENLITPQVEERSREMDCE---YTQLKKRGLCLVPLSMVVNYL
             LEDTASSP  SP V        N       I    E+R   +  +      LKK+GLCLVPLSMV N+L
Subjt:  VEDESLEDTASSPVNSPKVPESTYFSKNQKHKENLITPQVEERSREMDCE---YTQLKKRGLCLVPLSMVVNYL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAATCAAACTCCACCAATAATTCCCAAATAAGCTGCAGCCGAGGCCGCGACCGCAGCGACGATGGCGATCGGTCCCCGGAGGAGAGTGGCTGGACCATCTACTT
TGAAGACTTCCTCAACTCTTCCGACCATCAACAACTCAGCTCCTTCTCTTCTGATGGTGTTGCTCCTGATGATCAACCCCACGTCGCACCCGACGCTGCTTCCTCCGTGG
TCGGTGACAACGACGTGGCCGCGCCCGGGTTGAGCTGCAAAGTTATGAATGGTTTCAAGAAGAGGAGGATGATGATCAAAGAGGTGTTTGTTGAAGATGAGTCCTTGGAG
GATACTGCTAGCTCCCCTGTCAATAGCCCCAAGGTTCCTGAGTCAACCTACTTCAGCAAAAACCAGAAGCACAAGGAGAATCTGATAACTCCTCAGGTGGAAGAAAGATC
AAGAGAAATGGATTGTGAGTACACACAATTGAAGAAAAGAGGGCTTTGCTTAGTACCTTTGTCAATGGTAGTTAATTATTTGGCTGAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAATCAAACTCCACCAATAATTCCCAAATAAGCTGCAGCCGAGGCCGCGACCGCAGCGACGATGGCGATCGGTCCCCGGAGGAGAGTGGCTGGACCATCTACTT
TGAAGACTTCCTCAACTCTTCCGACCATCAACAACTCAGCTCCTTCTCTTCTGATGGTGTTGCTCCTGATGATCAACCCCACGTCGCACCCGACGCTGCTTCCTCCGTGG
TCGGTGACAACGACGTGGCCGCGCCCGGGTTGAGCTGCAAAGTTATGAATGGTTTCAAGAAGAGGAGGATGATGATCAAAGAGGTGTTTGTTGAAGATGAGTCCTTGGAG
GATACTGCTAGCTCCCCTGTCAATAGCCCCAAGGTTCCTGAGTCAACCTACTTCAGCAAAAACCAGAAGCACAAGGAGAATCTGATAACTCCTCAGGTGGAAGAAAGATC
AAGAGAAATGGATTGTGAGTACACACAATTGAAGAAAAGAGGGCTTTGCTTAGTACCTTTGTCAATGGTAGTTAATTATTTGGCTGAA
Protein sequenceShow/hide protein sequence
MAKSNSTNNSQISCSRGRDRSDDGDRSPEESGWTIYFEDFLNSSDHQQLSSFSSDGVAPDDQPHVAPDAASSVVGDNDVAAPGLSCKVMNGFKKRRMMIKEVFVEDESLE
DTASSPVNSPKVPESTYFSKNQKHKENLITPQVEERSREMDCEYTQLKKRGLCLVPLSMVVNYLAE