CuGenDBv2

Gene ID	MS008169
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like
Genome location	scaffold703:756509..759546
RNA-Seq Expression	MS008169
Synteny	MS008169
Gene Ontology terms	GO:0005515 - protein binding (molecular function)
InterPro domains	IPR011990 - Tetratricopeptide-like helical domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6607819.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]

1.1e-174

86.22

Show/hide

Query:  MRSKSKNLSSLFRSAIAASKPSQNLQDAALKDYVSTIDPFSPSTSLSKAIDYRYIKSANSKKPPQKLNSDVQFPALVLEEPSGSGDSMKHLTKAISSILC
        M SKSKNLSSLFRSAI ASKPSQN QDAALK+YVS IDPFSPSTSLSKAID R IKSANSKK PQKLNSDVQFPAL+LEEPSGSGDSMKHLTKAISSILC
Subjt:  MRSKSKNLSSLFRSAIAASKPSQNLQDAALKDYVSTIDPFSPSTSLSKAIDYRYIKSANSKKPPQKLNSDVQFPALVLEEPSGSGDSMKHLTKAISSILC

Query:  EGSSVSSHDAQGNGDDKSVEKLLDIPWFSKISNHSISLRRREISRERKQKWIFKSSQSNRFNRLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC
        EG SV S DAQ NGD+ S+++LLDIPWFS +SNHSISLRRREISRERKQKWIFK+SQ+ RF++LVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC
Subjt:  EGSSVSSHDAQGNGDDKSVEKLLDIPWFSKISNHSISLRRREISRERKQKWIFKSSQSNRFNRLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC

Query:  LEKAKTSKDVEIVLEQIAKVYQLFKLMKEQGFQIEDETYGPVLTYLIEMDMMEEFDFFCEAIKDGHPGSYSRLGYYEMLFYVKMNDGEKVQELCKHAATN
        LEKAKTSKD+E+VLEQIAKVYQLFKLMKE GFQ+EDETYGPVLTYLI+MDMMEEF+FFCEA+KDG+PGS SRLGYYEMLFYVK+ND EK+QELC+HA  +
Subjt:  LEKAKTSKDVEIVLEQIAKVYQLFKLMKEQGFQIEDETYGPVLTYLIEMDMMEEFDFFCEAIKDGHPGSYSRLGYYEMLFYVKMNDGEKVQELCKHAATN

Query:  DGVDKYNLQENYLLALCECEQKNEILQMLEIIDITKLSSTVLAVNIFKCLARLSLHSFAEKLLVAFKTSG
        DGVDKY+LQENYLLALCECEQK E+LQMLEI+DITKLSSTVLA N+FKCL RL LHS AEKLLVA KTSG
Subjt:  DGVDKYNLQENYLLALCECEQKNEILQMLEIIDITKLSSTVLAVNIFKCLARLSLHSFAEKLLVAFKTSG

KAG7015217.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]

6.4e-175

86.22

Show/hide

Query:  MRSKSKNLSSLFRSAIAASKPSQNLQDAALKDYVSTIDPFSPSTSLSKAIDYRYIKSANSKKPPQKLNSDVQFPALVLEEPSGSGDSMKHLTKAISSILC
        M SKSKNLSSLFRSAI ASKPSQN QDAALK+YVS IDPFSPSTSLSKAID R IKSANSKK PQKLNSDVQFPAL+LEEPSGSGDSMKHLTKAISSILC
Subjt:  MRSKSKNLSSLFRSAIAASKPSQNLQDAALKDYVSTIDPFSPSTSLSKAIDYRYIKSANSKKPPQKLNSDVQFPALVLEEPSGSGDSMKHLTKAISSILC

Query:  EGSSVSSHDAQGNGDDKSVEKLLDIPWFSKISNHSISLRRREISRERKQKWIFKSSQSNRFNRLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC
        EG SV S DAQ NGD+ S+++LLDIPWFS +SNHSISLRRREISRERKQKWIFK+SQ+ RF++LVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC
Subjt:  EGSSVSSHDAQGNGDDKSVEKLLDIPWFSKISNHSISLRRREISRERKQKWIFKSSQSNRFNRLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC

Query:  LEKAKTSKDVEIVLEQIAKVYQLFKLMKEQGFQIEDETYGPVLTYLIEMDMMEEFDFFCEAIKDGHPGSYSRLGYYEMLFYVKMNDGEKVQELCKHAATN
        LEKAKTSKD+E+VLEQIAKVYQLFKLMKE GFQ+EDETYGPVLTYLI+MDMMEEF+FFCEA+KDG+PGS SRLGYYEMLFYVK+ND EK+QELC+HA  +
Subjt:  LEKAKTSKDVEIVLEQIAKVYQLFKLMKEQGFQIEDETYGPVLTYLIEMDMMEEFDFFCEAIKDGHPGSYSRLGYYEMLFYVKMNDGEKVQELCKHAATN

Query:  DGVDKYNLQENYLLALCECEQKNEILQMLEIIDITKLSSTVLAVNIFKCLARLSLHSFAEKLLVAFKTSG
        DGVDKY+LQENYLLALCECEQK E+LQMLEI+DITKLSSTVLA N+FKCL RL LHS AEKLLVA KTSG
Subjt:  DGVDKYNLQENYLLALCECEQKNEILQMLEIIDITKLSSTVLAVNIFKCLARLSLHSFAEKLLVAFKTSG

XP_022139585.1 pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like [Momordica charantia]

8.9e-201

98.65

Show/hide

Query:  MRSKSKNLSSLFRSAIAASKPSQNLQDAALKDYVSTIDPFSPSTSLSKAIDYRYIKSANSKKPPQKLNSDVQFPALVLEEPSGSGDSMKHLTKAISSILC
        MRSKSKNLSSLFRSAIAASKPSQNLQDAALKDYVSTIDPFSPSTSLSKAIDYRYIKSANSKKPPQKLNSDVQFPALVLEEPSGSGDSMKHLTKAISSILC
Subjt:  MRSKSKNLSSLFRSAIAASKPSQNLQDAALKDYVSTIDPFSPSTSLSKAIDYRYIKSANSKKPPQKLNSDVQFPALVLEEPSGSGDSMKHLTKAISSILC

Query:  EGSSVSSHDAQGNGDDKSVEKLLDIPWFSKISNHSISLRRREISRERKQKWIFKSSQSNRFNRLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC
        EGSSVSS DAQGNGDDKSVEKLLDIPWFSKISNHSIS RRREISRERKQKWIFKSSQSNRFNRLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNAL+DIC
Subjt:  EGSSVSSHDAQGNGDDKSVEKLLDIPWFSKISNHSISLRRREISRERKQKWIFKSSQSNRFNRLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC

Query:  LEKAKTSKDVEIVLEQIAKVYQLFKLMKEQGFQIEDETYGPVLTYLIEMDMMEEFDFFCEAIKDGHPGSYSRLGYYEMLFYVKMNDGEKVQELCKHAATN
        LEKAKTSKDVEIVLEQIAKVYQLFKLMKEQGFQIEDETYGPVLTYLIEMDMMEEFDFFCEAIKDGHPGSYSRLGYYEMLFYVK+NDGEKVQELCKHAATN
Subjt:  LEKAKTSKDVEIVLEQIAKVYQLFKLMKEQGFQIEDETYGPVLTYLIEMDMMEEFDFFCEAIKDGHPGSYSRLGYYEMLFYVKMNDGEKVQELCKHAATN

Query:  DGVDKYNLQENYLLALCECEQKNEILQMLEIIDITKLSSTVLAVNIFKCLARLSLHSFAEKLLVAFKTSG
        DGVDKYNLQENYLLALCECEQKNEILQMLEIIDITKLSSTVLAVNIF+CLARLSLHSFAEKLLVAFKTSG
Subjt:  DGVDKYNLQENYLLALCECEQKNEILQMLEIIDITKLSSTVLAVNIFKCLARLSLHSFAEKLLVAFKTSG

XP_022940187.1 pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X1 [Cucurbita moschata]

1.7e-175

86.49

Show/hide

Query:  MRSKSKNLSSLFRSAIAASKPSQNLQDAALKDYVSTIDPFSPSTSLSKAIDYRYIKSANSKKPPQKLNSDVQFPALVLEEPSGSGDSMKHLTKAISSILC
        M SKSKNLSSLFRSAI ASKPSQN QDAALK+YVS IDPFSPSTSLSKA D R IKSANSKK PQKLNSDVQFPAL+LEEPSGSGDSMKHLTKAISSILC
Subjt:  MRSKSKNLSSLFRSAIAASKPSQNLQDAALKDYVSTIDPFSPSTSLSKAIDYRYIKSANSKKPPQKLNSDVQFPALVLEEPSGSGDSMKHLTKAISSILC

Query:  EGSSVSSHDAQGNGDDKSVEKLLDIPWFSKISNHSISLRRREISRERKQKWIFKSSQSNRFNRLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC
        EGSSV S DAQ NGD+ S+++LLDIPWFS +SNHSISLRRREISRERKQKWIFK+SQ+ RFN+LVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC
Subjt:  EGSSVSSHDAQGNGDDKSVEKLLDIPWFSKISNHSISLRRREISRERKQKWIFKSSQSNRFNRLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC

Query:  LEKAKTSKDVEIVLEQIAKVYQLFKLMKEQGFQIEDETYGPVLTYLIEMDMMEEFDFFCEAIKDGHPGSYSRLGYYEMLFYVKMNDGEKVQELCKHAATN
        LEKAKTSKD+E+VLEQIAKVYQLFKLMKE GFQ+EDETYGPVLTYLI+MDMMEEF+FFCEA+KDG+PGS SRLGYYEMLFYVK+ND EK+QELC+HA  +
Subjt:  LEKAKTSKDVEIVLEQIAKVYQLFKLMKEQGFQIEDETYGPVLTYLIEMDMMEEFDFFCEAIKDGHPGSYSRLGYYEMLFYVKMNDGEKVQELCKHAATN

Query:  DGVDKYNLQENYLLALCECEQKNEILQMLEIIDITKLSSTVLAVNIFKCLARLSLHSFAEKLLVAFKTSG
        DGVDKY+LQENYLLALCECEQK E+LQMLEI+DITKLSSTVLA N+FKCL RL LHS AEKLLVA KTSG
Subjt:  DGVDKYNLQENYLLALCECEQKNEILQMLEIIDITKLSSTVLAVNIFKCLARLSLHSFAEKLLVAFKTSG

XP_022981387.1 pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X1 [Cucurbita maxima]

1.9e-174

86.22

Show/hide

Query:  MRSKSKNLSSLFRSAIAASKPSQNLQDAALKDYVSTIDPFSPSTSLSKAIDYRYIKSANSKKPPQKLNSDVQFPALVLEEPSGSGDSMKHLTKAISSILC
        M SKSKNLSSLFRSAI ASKPSQN QDAALK+YVS IDPFSPSTSLSKAID R IKSANSKK PQKLNSDVQFPAL+LEEPSGSGDSMKHLTKAISSILC
Subjt:  MRSKSKNLSSLFRSAIAASKPSQNLQDAALKDYVSTIDPFSPSTSLSKAIDYRYIKSANSKKPPQKLNSDVQFPALVLEEPSGSGDSMKHLTKAISSILC

Query:  EGSSVSSHDAQGNGDDKSVEKLLDIPWFSKISNHSISLRRREISRERKQKWIFKSSQSNRFNRLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC
        EGSSV S DAQ NGD+ S+++LLDIPWFS ISNHSISLRRREISRERKQKWIFK+SQ+ RF++LVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC
Subjt:  EGSSVSSHDAQGNGDDKSVEKLLDIPWFSKISNHSISLRRREISRERKQKWIFKSSQSNRFNRLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC

Query:  LEKAKTSKDVEIVLEQIAKVYQLFKLMKEQGFQIEDETYGPVLTYLIEMDMMEEFDFFCEAIKDGHPGSYSRLGYYEMLFYVKMNDGEKVQELCKHAATN
        LEKAKTSKD+E+VLE IAKVYQLFKLMKE GFQ+EDETYGPVL YLI+MDMMEEF+FFCEA+KDG+PGS SRLGYYEMLFYVK+ND EK+QELC+HA  +
Subjt:  LEKAKTSKDVEIVLEQIAKVYQLFKLMKEQGFQIEDETYGPVLTYLIEMDMMEEFDFFCEAIKDGHPGSYSRLGYYEMLFYVKMNDGEKVQELCKHAATN

Query:  DGVDKYNLQENYLLALCECEQKNEILQMLEIIDITKLSSTVLAVNIFKCLARLSLHSFAEKLLVAFKTSG
        DGVDKY+LQENYLLALCECEQK E+LQMLEI+DITKL+STVLA NIFKCL RL LHS AEKLLVA KTSG
Subjt:  DGVDKYNLQENYLLALCECEQKNEILQMLEIIDITKLSSTVLAVNIFKCLARLSLHSFAEKLLVAFKTSG

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CCQ2 pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like

4.3e-201

98.65

Show/hide

Query:  MRSKSKNLSSLFRSAIAASKPSQNLQDAALKDYVSTIDPFSPSTSLSKAIDYRYIKSANSKKPPQKLNSDVQFPALVLEEPSGSGDSMKHLTKAISSILC
        MRSKSKNLSSLFRSAIAASKPSQNLQDAALKDYVSTIDPFSPSTSLSKAIDYRYIKSANSKKPPQKLNSDVQFPALVLEEPSGSGDSMKHLTKAISSILC
Subjt:  MRSKSKNLSSLFRSAIAASKPSQNLQDAALKDYVSTIDPFSPSTSLSKAIDYRYIKSANSKKPPQKLNSDVQFPALVLEEPSGSGDSMKHLTKAISSILC

Query:  EGSSVSSHDAQGNGDDKSVEKLLDIPWFSKISNHSISLRRREISRERKQKWIFKSSQSNRFNRLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC
        EGSSVSS DAQGNGDDKSVEKLLDIPWFSKISNHSIS RRREISRERKQKWIFKSSQSNRFNRLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNAL+DIC
Subjt:  EGSSVSSHDAQGNGDDKSVEKLLDIPWFSKISNHSISLRRREISRERKQKWIFKSSQSNRFNRLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC

Query:  LEKAKTSKDVEIVLEQIAKVYQLFKLMKEQGFQIEDETYGPVLTYLIEMDMMEEFDFFCEAIKDGHPGSYSRLGYYEMLFYVKMNDGEKVQELCKHAATN
        LEKAKTSKDVEIVLEQIAKVYQLFKLMKEQGFQIEDETYGPVLTYLIEMDMMEEFDFFCEAIKDGHPGSYSRLGYYEMLFYVK+NDGEKVQELCKHAATN
Subjt:  LEKAKTSKDVEIVLEQIAKVYQLFKLMKEQGFQIEDETYGPVLTYLIEMDMMEEFDFFCEAIKDGHPGSYSRLGYYEMLFYVKMNDGEKVQELCKHAATN

Query:  DGVDKYNLQENYLLALCECEQKNEILQMLEIIDITKLSSTVLAVNIFKCLARLSLHSFAEKLLVAFKTSG
        DGVDKYNLQENYLLALCECEQKNEILQMLEIIDITKLSSTVLAVNIF+CLARLSLHSFAEKLLVAFKTSG
Subjt:  DGVDKYNLQENYLLALCECEQKNEILQMLEIIDITKLSSTVLAVNIFKCLARLSLHSFAEKLLVAFKTSG

A0A6J1FIW6 pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X1

8.2e-176

86.49

Show/hide

Query:  MRSKSKNLSSLFRSAIAASKPSQNLQDAALKDYVSTIDPFSPSTSLSKAIDYRYIKSANSKKPPQKLNSDVQFPALVLEEPSGSGDSMKHLTKAISSILC
        M SKSKNLSSLFRSAI ASKPSQN QDAALK+YVS IDPFSPSTSLSKA D R IKSANSKK PQKLNSDVQFPAL+LEEPSGSGDSMKHLTKAISSILC
Subjt:  MRSKSKNLSSLFRSAIAASKPSQNLQDAALKDYVSTIDPFSPSTSLSKAIDYRYIKSANSKKPPQKLNSDVQFPALVLEEPSGSGDSMKHLTKAISSILC

Query:  EGSSVSSHDAQGNGDDKSVEKLLDIPWFSKISNHSISLRRREISRERKQKWIFKSSQSNRFNRLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC
        EGSSV S DAQ NGD+ S+++LLDIPWFS +SNHSISLRRREISRERKQKWIFK+SQ+ RFN+LVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC
Subjt:  EGSSVSSHDAQGNGDDKSVEKLLDIPWFSKISNHSISLRRREISRERKQKWIFKSSQSNRFNRLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC

Query:  LEKAKTSKDVEIVLEQIAKVYQLFKLMKEQGFQIEDETYGPVLTYLIEMDMMEEFDFFCEAIKDGHPGSYSRLGYYEMLFYVKMNDGEKVQELCKHAATN
        LEKAKTSKD+E+VLEQIAKVYQLFKLMKE GFQ+EDETYGPVLTYLI+MDMMEEF+FFCEA+KDG+PGS SRLGYYEMLFYVK+ND EK+QELC+HA  +
Subjt:  LEKAKTSKDVEIVLEQIAKVYQLFKLMKEQGFQIEDETYGPVLTYLIEMDMMEEFDFFCEAIKDGHPGSYSRLGYYEMLFYVKMNDGEKVQELCKHAATN

Query:  DGVDKYNLQENYLLALCECEQKNEILQMLEIIDITKLSSTVLAVNIFKCLARLSLHSFAEKLLVAFKTSG
        DGVDKY+LQENYLLALCECEQK E+LQMLEI+DITKLSSTVLA N+FKCL RL LHS AEKLLVA KTSG
Subjt:  DGVDKYNLQENYLLALCECEQKNEILQMLEIIDITKLSSTVLAVNIFKCLARLSLHSFAEKLLVAFKTSG

A0A6J1FNL3 pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X2

7.7e-174

86.22

Show/hide

Query:  MRSKSKNLSSLFRSAIAASKPSQNLQDAALKDYVSTIDPFSPSTSLSKAIDYRYIKSANSKKPPQKLNSDVQFPALVLEEPSGSGDSMKHLTKAISSILC
        M SKSKNLSSLFRSAI ASKPSQN QDAALK+YVS IDPFSPSTSLSKA D R IKSANSKK PQKLNSDVQFPAL+LEEPSGSGDSMKHLTKAISSILC
Subjt:  MRSKSKNLSSLFRSAIAASKPSQNLQDAALKDYVSTIDPFSPSTSLSKAIDYRYIKSANSKKPPQKLNSDVQFPALVLEEPSGSGDSMKHLTKAISSILC

Query:  EGSSVSSHDAQGNGDDKSVEKLLDIPWFSKISNHSISLRRREISRERKQKWIFKSSQSNRFNRLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC
         GSSV S DAQ NGD+ S+++LLDIPWFS +SNHSISLRRREISRERKQKWIFK+SQ+ RFN+LVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC
Subjt:  EGSSVSSHDAQGNGDDKSVEKLLDIPWFSKISNHSISLRRREISRERKQKWIFKSSQSNRFNRLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC

Query:  LEKAKTSKDVEIVLEQIAKVYQLFKLMKEQGFQIEDETYGPVLTYLIEMDMMEEFDFFCEAIKDGHPGSYSRLGYYEMLFYVKMNDGEKVQELCKHAATN
        LEKAKTSKD+E+VLEQIAKVYQLFKLMKE GFQ+EDETYGPVLTYLI+MDMMEEF+FFCEA+KDG+PGS SRLGYYEMLFYVK+ND EK+QELC+HA  +
Subjt:  LEKAKTSKDVEIVLEQIAKVYQLFKLMKEQGFQIEDETYGPVLTYLIEMDMMEEFDFFCEAIKDGHPGSYSRLGYYEMLFYVKMNDGEKVQELCKHAATN

Query:  DGVDKYNLQENYLLALCECEQKNEILQMLEIIDITKLSSTVLAVNIFKCLARLSLHSFAEKLLVAFKTSG
        DGVDKY+LQENYLLALCECEQK E+LQMLEI+DITKLSSTVLA N+FKCL RL LHS AEKLLVA KTSG
Subjt:  DGVDKYNLQENYLLALCECEQKNEILQMLEIIDITKLSSTVLAVNIFKCLARLSLHSFAEKLLVAFKTSG

A0A6J1ITU1 pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X1

9.1e-175

86.22

Show/hide

Query:  MRSKSKNLSSLFRSAIAASKPSQNLQDAALKDYVSTIDPFSPSTSLSKAIDYRYIKSANSKKPPQKLNSDVQFPALVLEEPSGSGDSMKHLTKAISSILC
        M SKSKNLSSLFRSAI ASKPSQN QDAALK+YVS IDPFSPSTSLSKAID R IKSANSKK PQKLNSDVQFPAL+LEEPSGSGDSMKHLTKAISSILC
Subjt:  MRSKSKNLSSLFRSAIAASKPSQNLQDAALKDYVSTIDPFSPSTSLSKAIDYRYIKSANSKKPPQKLNSDVQFPALVLEEPSGSGDSMKHLTKAISSILC

Query:  EGSSVSSHDAQGNGDDKSVEKLLDIPWFSKISNHSISLRRREISRERKQKWIFKSSQSNRFNRLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC
        EGSSV S DAQ NGD+ S+++LLDIPWFS ISNHSISLRRREISRERKQKWIFK+SQ+ RF++LVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC
Subjt:  EGSSVSSHDAQGNGDDKSVEKLLDIPWFSKISNHSISLRRREISRERKQKWIFKSSQSNRFNRLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC

Query:  LEKAKTSKDVEIVLEQIAKVYQLFKLMKEQGFQIEDETYGPVLTYLIEMDMMEEFDFFCEAIKDGHPGSYSRLGYYEMLFYVKMNDGEKVQELCKHAATN
        LEKAKTSKD+E+VLE IAKVYQLFKLMKE GFQ+EDETYGPVL YLI+MDMMEEF+FFCEA+KDG+PGS SRLGYYEMLFYVK+ND EK+QELC+HA  +
Subjt:  LEKAKTSKDVEIVLEQIAKVYQLFKLMKEQGFQIEDETYGPVLTYLIEMDMMEEFDFFCEAIKDGHPGSYSRLGYYEMLFYVKMNDGEKVQELCKHAATN

Query:  DGVDKYNLQENYLLALCECEQKNEILQMLEIIDITKLSSTVLAVNIFKCLARLSLHSFAEKLLVAFKTSG
        DGVDKY+LQENYLLALCECEQK E+LQMLEI+DITKL+STVLA NIFKCL RL LHS AEKLLVA KTSG
Subjt:  DGVDKYNLQENYLLALCECEQKNEILQMLEIIDITKLSSTVLAVNIFKCLARLSLHSFAEKLLVAFKTSG

A0A6J1J1Y5 pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X2

8.5e-173

85.95

Show/hide

Query:  MRSKSKNLSSLFRSAIAASKPSQNLQDAALKDYVSTIDPFSPSTSLSKAIDYRYIKSANSKKPPQKLNSDVQFPALVLEEPSGSGDSMKHLTKAISSILC
        M SKSKNLSSLFRSAI ASKPSQN QDAALK+YVS IDPFSPSTSLSKAID R IKSANSKK PQKLNSDVQFPAL+LEEPSGSGDSMKHLTKAISSILC
Subjt:  MRSKSKNLSSLFRSAIAASKPSQNLQDAALKDYVSTIDPFSPSTSLSKAIDYRYIKSANSKKPPQKLNSDVQFPALVLEEPSGSGDSMKHLTKAISSILC

Query:  EGSSVSSHDAQGNGDDKSVEKLLDIPWFSKISNHSISLRRREISRERKQKWIFKSSQSNRFNRLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC
         GSSV S DAQ NGD+ S+++LLDIPWFS ISNHSISLRRREISRERKQKWIFK+SQ+ RF++LVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC
Subjt:  EGSSVSSHDAQGNGDDKSVEKLLDIPWFSKISNHSISLRRREISRERKQKWIFKSSQSNRFNRLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC

Query:  LEKAKTSKDVEIVLEQIAKVYQLFKLMKEQGFQIEDETYGPVLTYLIEMDMMEEFDFFCEAIKDGHPGSYSRLGYYEMLFYVKMNDGEKVQELCKHAATN
        LEKAKTSKD+E+VLE IAKVYQLFKLMKE GFQ+EDETYGPVL YLI+MDMMEEF+FFCEA+KDG+PGS SRLGYYEMLFYVK+ND EK+QELC+HA  +
Subjt:  LEKAKTSKDVEIVLEQIAKVYQLFKLMKEQGFQIEDETYGPVLTYLIEMDMMEEFDFFCEAIKDGHPGSYSRLGYYEMLFYVKMNDGEKVQELCKHAATN

Query:  DGVDKYNLQENYLLALCECEQKNEILQMLEIIDITKLSSTVLAVNIFKCLARLSLHSFAEKLLVAFKTSG
        DGVDKY+LQENYLLALCECEQK E+LQMLEI+DITKL+STVLA NIFKCL RL LHS AEKLLVA KTSG
Subjt:  DGVDKYNLQENYLLALCECEQKNEILQMLEIIDITKLSSTVLAVNIFKCLARLSLHSFAEKLLVAFKTSG

SwissProt top hits

e value

%identity

Alignment

O49711 Pentatricopeptide repeat-containing protein At4g21880, mitochondrial

4.8e-40

32.6

Show/hide

Query:  KNLSSLFRSAIAASKPSQNLQDAALKDYVSTIDPFSPSTSLSKAIDYRYIKSANSKKPPQKLNSDVQFPALVLEEPSGSGDSMKHLTKAISSILCEGSSV
        K+LS++FR A+  +  +  ++  A    V+     S +  +S ++   ++ S  S +    +  D   PAL  +               +SS L   S  
Subjt:  KNLSSLFRSAIAASKPSQNLQDAALKDYVSTIDPFSPSTSLSKAIDYRYIKSANSKKPPQKLNSDVQFPALVLEEPSGSGDSMKHLTKAISSILCEGSSV

Query:  SSHDAQGNGD---DKSVEKLLDIPWFSKISNHSISLRR-REISRERKQKWIFKSSQSNRFNRLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDICL
         +   + NG+    K+V + LD+     +S    S ++ ++ SR R     +++ QS    +L + C +KLGT+   EV  K+G+E G KEYNA+  +C+
Subjt:  SSHDAQGNGD---DKSVEKLLDIPWFSKISNHSISLRR-REISRERKQKWIFKSSQSNRFNRLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDICL

Query:  EKAKTSKDVEIVLEQIAKVYQLFKLMKEQGFQIEDETYGPVLTYLIEMDMMEEFDFFCEAIKDGHPGSYSRLGYYEMLFYVKMNDGEKVQELCKHAATND
        ++A+ S D E  L+QI K  +  K M++ GF I +  YGP   YL++M+M+ EF    + IK+  P S  RL YYEML ++++ND EK+ +LC +   + 
Subjt:  EKAKTSKDVEIVLEQIAKVYQLFKLMKEQGFQIEDETYGPVLTYLIEMDMMEEFDFFCEAIKDGHPGSYSRLGYYEMLFYVKMNDGEKVQELCKHAATND

Query:  GVDKYNLQENYLLALCECEQKNEILQMLEIIDITKLSSTVLAVNIFKCLARLSLHSFAEKLL
        G+    LQE YL+ALCE + K    ++LEI+DIT +SS     +IF  L +  L S A KLL
Subjt:  GVDKYNLQENYLLALCECEQKNEILQMLEIIDITKLSSTVLAVNIFKCLARLSLHSFAEKLL

Q6NQ81 Pentatricopeptide repeat-containing protein At4g04790, mitochondrial

1.2e-54

43.24

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Query:  SGSGDSMKHL--TKAISSILCEGS---SVSSHDAQGNGDDKSVEK--LLDIPWFSKISNHSISLRRREISRERKQKWIFK-SSQSNRFNRLVRNCAQKLG
        +G+  ++K L  +K  SS L E S    VS        D  S+EK   L IP F+    + ISLR +E+SRERK++ ++K +  S RF ++ R+ AQKLG
Subjt:  SGSGDSMKHL--TKAISSILCEGS---SVSSHDAQGNGDDKSVEK--LLDIPWFSKISNHSISLRRREISRERKQKWIFK-SSQSNRFNRLVRNCAQKLG

Query:  TDVTLEVFGKLGRETGVKEYNALIDICLEKAKTSKDVEIVLEQIAKVYQLFKLMKEQGFQIEDETYGPVLTYLIEMDMMEEFDFFCEAIKDGHPGSYSRL
        T+     F ++ +E  V EYNA+I + LE A+ S D++  L  I K ++L K M+++GF IE+  YGP+L YLI MDM++EF  F + I++  PGS  RL
Subjt:  TDVTLEVFGKLGRETGVKEYNALIDICLEKAKTSKDVEIVLEQIAKVYQLFKLMKEQGFQIEDETYGPVLTYLIEMDMMEEFDFFCEAIKDGHPGSYSRL

Query:  GYYEMLFYVKMNDGEKVQELCKHAATNDGVDKYNLQENYLLALCECEQKNEILQMLEIIDITKLSSTVLAVNIFKCLARLSLHSFAEKLLVAFKTS
        GYYEML ++ + DGEK++ELC     ++G     LQENYLLALC+ +QK  + ++LEI+DITK+ S+ L  NIF+ L R SL S A + L   + S
Subjt:  GYYEMLFYVKMNDGEKVQELCKHAATNDGVDKYNLQENYLLALCECEQKNEILQMLEIIDITKLSSTVLAVNIFKCLARLSLHSFAEKLLVAFKTS

Arabidopsis top hits

e value

%identity

Alignment

AT4G04790.1 Tetratricopeptide repeat (TPR)-like superfamily protein

8.4e-56

43.24

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Query:  SGSGDSMKHL--TKAISSILCEGS---SVSSHDAQGNGDDKSVEK--LLDIPWFSKISNHSISLRRREISRERKQKWIFK-SSQSNRFNRLVRNCAQKLG
        +G+  ++K L  +K  SS L E S    VS        D  S+EK   L IP F+    + ISLR +E+SRERK++ ++K +  S RF ++ R+ AQKLG
Subjt:  SGSGDSMKHL--TKAISSILCEGS---SVSSHDAQGNGDDKSVEK--LLDIPWFSKISNHSISLRRREISRERKQKWIFK-SSQSNRFNRLVRNCAQKLG

Query:  TDVTLEVFGKLGRETGVKEYNALIDICLEKAKTSKDVEIVLEQIAKVYQLFKLMKEQGFQIEDETYGPVLTYLIEMDMMEEFDFFCEAIKDGHPGSYSRL
        T+     F ++ +E  V EYNA+I + LE A+ S D++  L  I K ++L K M+++GF IE+  YGP+L YLI MDM++EF  F + I++  PGS  RL
Subjt:  TDVTLEVFGKLGRETGVKEYNALIDICLEKAKTSKDVEIVLEQIAKVYQLFKLMKEQGFQIEDETYGPVLTYLIEMDMMEEFDFFCEAIKDGHPGSYSRL

Query:  GYYEMLFYVKMNDGEKVQELCKHAATNDGVDKYNLQENYLLALCECEQKNEILQMLEIIDITKLSSTVLAVNIFKCLARLSLHSFAEKLLVAFKTS
        GYYEML ++ + DGEK++ELC     ++G     LQENYLLALC+ +QK  + ++LEI+DITK+ S+ L  NIF+ L R SL S A + L   + S
Subjt:  GYYEMLFYVKMNDGEKVQELCKHAATNDGVDKYNLQENYLLALCECEQKNEILQMLEIIDITKLSSTVLAVNIFKCLARLSLHSFAEKLLVAFKTS

AT4G21880.1 Pentatricopeptide repeat (PPR) superfamily protein

3.4e-41

32.6

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Query:  KNLSSLFRSAIAASKPSQNLQDAALKDYVSTIDPFSPSTSLSKAIDYRYIKSANSKKPPQKLNSDVQFPALVLEEPSGSGDSMKHLTKAISSILCEGSSV
        K+LS++FR A+  +  +  ++  A    V+     S +  +S ++   ++ S  S +    +  D   PAL  +               +SS L   S  
Subjt:  KNLSSLFRSAIAASKPSQNLQDAALKDYVSTIDPFSPSTSLSKAIDYRYIKSANSKKPPQKLNSDVQFPALVLEEPSGSGDSMKHLTKAISSILCEGSSV

Query:  SSHDAQGNGD---DKSVEKLLDIPWFSKISNHSISLRR-REISRERKQKWIFKSSQSNRFNRLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDICL
         +   + NG+    K+V + LD+     +S    S ++ ++ SR R     +++ QS    +L + C +KLGT+   EV  K+G+E G KEYNA+  +C+
Subjt:  SSHDAQGNGD---DKSVEKLLDIPWFSKISNHSISLRR-REISRERKQKWIFKSSQSNRFNRLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDICL

Query:  EKAKTSKDVEIVLEQIAKVYQLFKLMKEQGFQIEDETYGPVLTYLIEMDMMEEFDFFCEAIKDGHPGSYSRLGYYEMLFYVKMNDGEKVQELCKHAATND
        ++A+ S D E  L+QI K  +  K M++ GF I +  YGP   YL++M+M+ EF    + IK+  P S  RL YYEML ++++ND EK+ +LC +   + 
Subjt:  EKAKTSKDVEIVLEQIAKVYQLFKLMKEQGFQIEDETYGPVLTYLIEMDMMEEFDFFCEAIKDGHPGSYSRLGYYEMLFYVKMNDGEKVQELCKHAATND

Query:  GVDKYNLQENYLLALCECEQKNEILQMLEIIDITKLSSTVLAVNIFKCLARLSLHSFAEKLL
        G+    LQE YL+ALCE + K    ++LEI+DIT +SS     +IF  L +  L S A KLL
Subjt:  GVDKYNLQENYLLALCECEQKNEILQMLEIIDITKLSSTVLAVNIFKCLARLSLHSFAEKLL

Sequences

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CDS sequence

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ATGCGTTCCAAATCCAAAAATCTAAGCTCACTATTCCGCTCCGCCATTGCAGCTTCAAAACCTTCACAGAACCTCCAAGATGCGGCTCTCAAAGACTACGTCTCCACCAT
CGACCCCTTTTCTCCCAGCACCTCTCTCTCTAAAGCCATCGATTATCGATATATCAAGTCCGCGAACTCCAAGAAGCCTCCCCAGAAGCTCAATTCTGATGTTCAATTTC
CTGCTCTCGTTTTGGAAGAGCCTTCAGGGTCTGGGGATTCTATGAAGCATCTAACCAAGGCAATATCTTCCATTCTGTGCGAAGGCTCATCTGTCAGCTCTCACGATGCA
CAAGGAAATGGTGATGATAAATCTGTGGAAAAATTATTAGACATACCGTGGTTTTCCAAGATATCCAATCATAGCATATCATTGCGTCGCAGAGAGATATCCCGTGAAAG
AAAGCAAAAATGGATTTTCAAAAGTAGCCAAAGCAACAGATTTAATCGATTAGTTAGAAATTGCGCACAGAAGCTGGGGACTGATGTTACTCTTGAAGTTTTTGGTAAAT
TGGGACGAGAAACTGGTGTGAAAGAATACAATGCACTTATAGATATATGTTTAGAGAAAGCTAAGACAAGTAAAGACGTGGAGATTGTATTGGAACAGATTGCCAAGGTT
TATCAGCTATTTAAATTAATGAAAGAACAGGGTTTTCAAATAGAAGATGAAACTTATGGTCCAGTTCTTACATATTTAATTGAAATGGACATGATGGAAGAATTTGATTT
TTTCTGTGAGGCTATAAAAGATGGACATCCAGGCTCGTATTCTAGGTTGGGTTATTATGAGATGTTGTTCTATGTTAAAATGAACGATGGAGAAAAAGTTCAGGAGCTTT
GTAAGCATGCTGCAACTAATGATGGAGTGGACAAATACAATTTACAAGAAAATTATTTGTTGGCCCTCTGCGAATGTGAGCAGAAGAACGAAATTCTGCAGATGCTGGAA
ATTATAGACATCACAAAGCTTTCATCAACTGTACTCGCAGTTAACATCTTCAAATGCTTAGCGAGGCTATCACTTCATTCTTTTGCAGAGAAGTTGCTTGTGGCATTTAA
AACTTCTGGTATGTTAATGATTACCATAAATTTTTAT

mRNA sequence

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Protein sequence

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MRSKSKNLSSLFRSAIAASKPSQNLQDAALKDYVSTIDPFSPSTSLSKAIDYRYIKSANSKKPPQKLNSDVQFPALVLEEPSGSGDSMKHLTKAISSILCEGSSVSSHDA
QGNGDDKSVEKLLDIPWFSKISNHSISLRRREISRERKQKWIFKSSQSNRFNRLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDICLEKAKTSKDVEIVLEQIAKV
YQLFKLMKEQGFQIEDETYGPVLTYLIEMDMMEEFDFFCEAIKDGHPGSYSRLGYYEMLFYVKMNDGEKVQELCKHAATNDGVDKYNLQENYLLALCECEQKNEILQMLE
IIDITKLSSTVLAVNIFKCLARLSLHSFAEKLLVAFKTSGMLMITINFY

MS008169 (gene) of Bitter gourd (TR) v1 genome