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MS008171 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008171
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionpolycomb group protein FIE2
Genome locationscaffold703:769745..769831
RNA-Seq ExpressionMS008171
SyntenyMS008171
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046456.1 polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM [Cucumis melo var. makuwa]2.7e-0482.76Show/hide
Query:  NVDGSPFVVAGGIDGIIRVIDAATERLYK
        NVDGSPFVVAGGI+GIIRVIDA +E++YK
Subjt:  NVDGSPFVVAGGIDGIIRVIDAATERLYK
KAE8650687.1 hypothetical protein Csa_011025 [Cucumis sativus]2.7e-0482.76Show/hide
Query:  NVDGSPFVVAGGIDGIIRVIDAATERLYK
        NVDGSPFVVAGGI+GIIRVIDA +E++YK
Subjt:  NVDGSPFVVAGGIDGIIRVIDAATERLYK
XP_004151960.2 LOW QUALITY PROTEIN: polycomb group protein FIE1 [Cucumis sativus]2.7e-0482.76Show/hide
Query:  NVDGSPFVVAGGIDGIIRVIDAATERLYK
        NVDGSPFVVAGGI+GIIRVIDA +E++YK
Subjt:  NVDGSPFVVAGGIDGIIRVIDAATERLYK
XP_008454560.1 PREDICTED: polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM [Cucumis melo]2.7e-0482.76Show/hide
Query:  NVDGSPFVVAGGIDGIIRVIDAATERLYK
        NVDGSPFVVAGGI+GIIRVIDA +E++YK
Subjt:  NVDGSPFVVAGGIDGIIRVIDAATERLYK
XP_022935834.1 polycomb group protein FIE2 [Cucurbita moschata]2.7e-0482.76Show/hide
Query:  NVDGSPFVVAGGIDGIIRVIDAATERLYK
        NVDGSPFVVAGGI+GIIRVIDA +E++YK
Subjt:  NVDGSPFVVAGGIDGIIRVIDAATERLYK
TrEMBL top hitse value%identityAlignment
A0A0A0LAJ8 WD_REPEATS_REGION domain-containing protein1.3e-0482.76Show/hide
Query:  NVDGSPFVVAGGIDGIIRVIDAATERLYK
        NVDGSPFVVAGGI+GIIRVIDA +E++YK
Subjt:  NVDGSPFVVAGGIDGIIRVIDAATERLYK
A0A5A7TWM0 Polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM1.3e-0482.76Show/hide
Query:  NVDGSPFVVAGGIDGIIRVIDAATERLYK
        NVDGSPFVVAGGI+GIIRVIDA +E++YK
Subjt:  NVDGSPFVVAGGIDGIIRVIDAATERLYK
A0A5D3BF55 Polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM1.3e-0482.76Show/hide
Query:  NVDGSPFVVAGGIDGIIRVIDAATERLYK
        NVDGSPFVVAGGI+GIIRVIDA +E++YK
Subjt:  NVDGSPFVVAGGIDGIIRVIDAATERLYK
A0A6J1DSS8 polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM1.3e-0482.76Show/hide
Query:  NVDGSPFVVAGGIDGIIRVIDAATERLYK
        NVDGSPFVVAGGI+GIIRVIDA +E++YK
Subjt:  NVDGSPFVVAGGIDGIIRVIDAATERLYK
A0A6J1IMF2 polycomb group protein FIE21.3e-0482.76Show/hide
Query:  NVDGSPFVVAGGIDGIIRVIDAATERLYK
        NVDGSPFVVAGGI+GIIRVIDA +E++YK
Subjt:  NVDGSPFVVAGGIDGIIRVIDAATERLYK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G20740.1 Transducin/WD40 repeat-like superfamily protein6.3e-0457.14Show/hide
Query:  VDGSPFVVAGGIDGIIRVIDAATERLYK
        V+G+P+V AGG+ GIIRVID  +E ++K
Subjt:  VDGSPFVVAGGIDGIIRVIDAATERLYK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AATGTTGATGGCTCTCCATTTGTTGTTGCTGGTGGAATCGATGGTATAATCCGTGTTATTGATGCTGCCACTGAAAGATTATACAAG
mRNA sequenceShow/hide mRNA sequence
AATGTTGATGGCTCTCCATTTGTTGTTGCTGGTGGAATCGATGGTATAATCCGTGTTATTGATGCTGCCACTGAAAGATTATACAAG
Protein sequenceShow/hide protein sequence
NVDGSPFVVAGGIDGIIRVIDAATERLYK