CuGenDBv2

Gene ID	MS008180
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein RALF-like 32
Genome location	scaffold45:451..779
RNA-Seq Expression	MS008180
Synteny	MS008180
Gene Ontology terms	GO:0019722 - calcium-mediated signaling (biological process) GO:0005576 - extracellular region (cellular component)
InterPro domains	IPR008801 - Rapid ALkalinization Factor

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6582127.1 Protein RALF-like 32, partial [Cucurbita argyrosperma subsp. sororia]

4.8e-22

62.04

Show/hide

Query:  TSTSSSSCYLLSF---NNAVTIVRSSMTPCNGSITECYAEEETLMESEISRRFLEQQKKYII--ALKKDQPACK-GGKGKPYTKSESCLPPPSNPCDRGY
        T+  S SC+LL      +   +  SS   CNGSI EC  EEETLMESEISRRFL QQKKYI   ALKKD PAC  GG G+PYTKS SC PPP+NP +RG 
Subjt:  TSTSSSSCYLLSF---NNAVTIVRSSMTPCNGSITECYAEEETLMESEISRRFLEQQKKYII--ALKKDQPACK-GGKGKPYTKSESCLPPPSNPCDRGY

Query:  SPIYRCKS
        S IYRC+S
Subjt:  SPIYRCKS

XP_022138044.1 protein RALF-like 32 [Momordica charantia]

2.4e-34

81.05

Show/hide

Query:  LLSFNNAVTIVRSSMTPCNGSITECYAEEETLMESEISRRFLEQQKKYII--ALKKDQPACKGGKGKPYTKSESCLPPPSNPCDRGYSPIYRCKS
        L SFNN  T++ +SMTPCNGSI ECY EEE LMESEISRRFLEQQKKYI    LKKDQPAC+GGKGKPYTKSESCLPPPSNP DRG  PIYRCKS
Subjt:  LLSFNNAVTIVRSSMTPCNGSITECYAEEETLMESEISRRFLEQQKKYII--ALKKDQPACKGGKGKPYTKSESCLPPPSNPCDRGYSPIYRCKS

XP_022138047.1 protein RALF-like 32 [Momordica charantia]

2.3e-24

68.04

Show/hide

Query:  LLSFNNAVTIVRSSM-TPCNGSITECYAEEETLMESEISRRFLEQQKKYII--ALKKDQPACKG-GKGKPYTKSESCLPPPSNPCDRGYSPIYRCKS
        LL    A+ ++R+S  +PCNGSI EC  E+E LMESEISRRFLEQQKKYI   ALKKD+PAC G G+G+PYTKS SC+PPPSNP DRG S IYRC+S
Subjt:  LLSFNNAVTIVRSSM-TPCNGSITECYAEEETLMESEISRRFLEQQKKYII--ALKKDQPACKG-GKGKPYTKSESCLPPPSNPCDRGYSPIYRCKS

XP_022138261.1 protein RALF-like 32 [Momordica charantia]

8.4e-43

88.29

Show/hide

Query:  VTPTASSTSTSSSSCYLLSFNNAVTIVRSSMTPCNGSITECYAEEETLMESEISRRFLEQQKKYII--ALKKDQPACKGGKGKPYTKSESCLPPPSNPCD
        VTPTASSTS+SSSSC LLSFNNAVTIV SSMTPCNGSI+ECYAEEETL ESEISRRFLEQQKKYI   A KKDQPACKGGKGKPYT+SESCLPPPSNP D
Subjt:  VTPTASSTSTSSSSCYLLSFNNAVTIVRSSMTPCNGSITECYAEEETLMESEISRRFLEQQKKYII--ALKKDQPACKGGKGKPYTKSESCLPPPSNPCD

Query:  RGYSPIYRCKS
        RG S IYRCKS
Subjt:  RGYSPIYRCKS

XP_023528073.1 protein RALF-like 32 [Cucurbita pepo subsp. pepo]

2.1e-22

62.04

Show/hide

Query:  TSTSSSSCYLLSF---NNAVTIVRSSMTPCNGSITECYAEEETLMESEISRRFLEQQKKYII--ALKKDQPACK-GGKGKPYTKSESCLPPPSNPCDRGY
        T+  S SC+LL      +   +  SS   CNGSI EC  EEETLMESEISRRFLEQQKKYI   ALKKD PAC  GG G+PYT+S SC PPP+NP +RG 
Subjt:  TSTSSSSCYLLSF---NNAVTIVRSSMTPCNGSITECYAEEETLMESEISRRFLEQQKKYII--ALKKDQPACK-GGKGKPYTKSESCLPPPSNPCDRGY

Query:  SPIYRCKS
        S IYRC+S
Subjt:  SPIYRCKS

TrEMBL top hits

e value

%identity

Alignment

A0A5A7VKE5 Protein RALF-like 32

3.3e-21

68.18

Show/hide

Query:  IVRSSMT-PCNGSITECYAEEETLMESEISRRFLEQQKKYII--ALKKDQPACKGGK-GKPYTKSESCLPPPSNPCDRGYSPIYRCKS
        +VR+S T  CNGSI EC +E+E LMESEISRRFL QQKKYI   ALKKD PAC G   G+PYTKS SC PPP+NP DRG   IYRC+S
Subjt:  IVRSSMT-PCNGSITECYAEEETLMESEISRRFLEQQKKYII--ALKKDQPACKGGK-GKPYTKSESCLPPPSNPCDRGYSPIYRCKS

A0A6J1C8Z5 protein RALF-like 32

1.2e-34

81.05

Show/hide

Query:  LLSFNNAVTIVRSSMTPCNGSITECYAEEETLMESEISRRFLEQQKKYII--ALKKDQPACKGGKGKPYTKSESCLPPPSNPCDRGYSPIYRCKS
        L SFNN  T++ +SMTPCNGSI ECY EEE LMESEISRRFLEQQKKYI    LKKDQPAC+GGKGKPYTKSESCLPPPSNP DRG  PIYRCKS
Subjt:  LLSFNNAVTIVRSSMTPCNGSITECYAEEETLMESEISRRFLEQQKKYII--ALKKDQPACKGGKGKPYTKSESCLPPPSNPCDRGYSPIYRCKS

A0A6J1C986 protein RALF-like 32

4.0e-43

88.29

Show/hide

Query:  VTPTASSTSTSSSSCYLLSFNNAVTIVRSSMTPCNGSITECYAEEETLMESEISRRFLEQQKKYII--ALKKDQPACKGGKGKPYTKSESCLPPPSNPCD
        VTPTASSTS+SSSSC LLSFNNAVTIV SSMTPCNGSI+ECYAEEETL ESEISRRFLEQQKKYI   A KKDQPACKGGKGKPYT+SESCLPPPSNP D
Subjt:  VTPTASSTSTSSSSCYLLSFNNAVTIVRSSMTPCNGSITECYAEEETLMESEISRRFLEQQKKYII--ALKKDQPACKGGKGKPYTKSESCLPPPSNPCD

Query:  RGYSPIYRCKS
        RG S IYRCKS
Subjt:  RGYSPIYRCKS

A0A6J1C9Y4 protein RALF-like 32

1.1e-24

68.04

Show/hide

Query:  LLSFNNAVTIVRSSM-TPCNGSITECYAEEETLMESEISRRFLEQQKKYII--ALKKDQPACKG-GKGKPYTKSESCLPPPSNPCDRGYSPIYRCKS
        LL    A+ ++R+S  +PCNGSI EC  E+E LMESEISRRFLEQQKKYI   ALKKD+PAC G G+G+PYTKS SC+PPPSNP DRG S IYRC+S
Subjt:  LLSFNNAVTIVRSSM-TPCNGSITECYAEEETLMESEISRRFLEQQKKYII--ALKKDQPACKG-GKGKPYTKSESCLPPPSNPCDRGYSPIYRCKS

A0A6J1GXB3 protein RALF-like 32

2.0e-21

60.19

Show/hide

Query:  TSTSSSSCYLLSF---NNAVTIVRSSMTPCNGSITECYAEEETLMESEISRRFLEQQKKYII--ALKKDQPACK-GGKGKPYTKSESCLPPPSNPCDRGY
        T+    SC+LL      +   +  SS   CNGSI EC  E+ETLMESEISRRFL QQKKYI   ALKKD PAC  GG G+PYTKS SC PPP+NP +RG 
Subjt:  TSTSSSSCYLLSF---NNAVTIVRSSMTPCNGSITECYAEEETLMESEISRRFLEQQKKYII--ALKKDQPACK-GGKGKPYTKSESCLPPPSNPCDRGY

Query:  SPIYRCKS
        S IYRC+S
Subjt:  SPIYRCKS

SwissProt top hits

e value

%identity

Alignment

O23262 Protein RALF-like 32

6.7e-11

47.71

Show/hide

Query:  STSTSSSSCYLLSFNNAVTIVRSSMTPCNGSITECYAEEET-----LMESEISRRFLEQQ--KKYIIALKKDQPACKGGK-GKPYTKSESCLPPPSNPCD
        ST T    C LL+    VT   SS + CNGS+ EC +  ET     +MES  S+R  E+Q  K    AL+++QPAC GGK G+ Y  S  CLPPPSNP  
Subjt:  STSTSSSSCYLLSFNNAVTIVRSSMTPCNGSITECYAEEET-----LMESEISRRFLEQQ--KKYIIALKKDQPACKGGK-GKPYTKSESCLPPPSNPCD

Query:  RGYSPIYRC
        RG S  YRC
Subjt:  RGYSPIYRC

Arabidopsis top hits

e value

%identity

Alignment

AT1G02900.1 rapid alkalinization factor 1

9.6e-05

41.03

Show/hide

Query:  CNGSITECYAEEETLMESEISRRFLEQQKKYII--ALKKDQPACKGGKGKPYTKSESCLPPPSNPCDRGYSPIYRCKS
        C+GSI EC   EE  M+SEI+RR L    KYI   +LK++   C   +G  Y   ++     +NP  RG S I RC+S
Subjt:  CNGSITECYAEEETLMESEISRRFLEQQKKYII--ALKKDQPACKGGKGKPYTKSESCLPPPSNPCDRGYSPIYRCKS

AT3G05490.1 ralf-like 22

5.6e-05

38.54

Show/hide

Query:  FNNAVTIVR----SSMTPCNGSITECYAEEETL-MESEISRRFLEQQKKYII--ALKKDQPACKGGKGKPYTKSESCLPPPSNPCDRGYSPIYRCK
        F +++  VR    S  + C GSI EC AEEE +  +S+ISRR L  QKKYI   A++++   C   +G  Y   +      +NP  RG S I RC+
Subjt:  FNNAVTIVR----SSMTPCNGSITECYAEEETL-MESEISRRFLEQQKKYII--ALKKDQPACKGGKGKPYTKSESCLPPPSNPCDRGYSPIYRCK

AT4G14010.1 ralf-like 32

4.8e-12

47.71

Show/hide

Query:  STSTSSSSCYLLSFNNAVTIVRSSMTPCNGSITECYAEEET-----LMESEISRRFLEQQ--KKYIIALKKDQPACKGGK-GKPYTKSESCLPPPSNPCD
        ST T    C LL+    VT   SS + CNGS+ EC +  ET     +MES  S+R  E+Q  K    AL+++QPAC GGK G+ Y  S  CLPPPSNP  
Subjt:  STSTSSSSCYLLSFNNAVTIVRSSMTPCNGSITECYAEEET-----LMESEISRRFLEQQ--KKYIIALKKDQPACKGGK-GKPYTKSESCLPPPSNPCD

Query:  RGYSPIYRC
        RG S  YRC
Subjt:  RGYSPIYRC

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

GTTACACCCACCGCCTCGTCCACGTCCACGTCCTCATCCTCCTGTTATCTGTTGAGTTTCAATAATGCCGTCACCATAGTTCGTAGCTCGATGACTCCATGCAACGGTTC
GATAACGGAGTGCTATGCAGAGGAAGAGACATTAATGGAGTCGGAGATAAGTCGGAGGTTTCTTGAACAGCAAAAGAAGTACATAATCGCTCTCAAGAAGGATCAACCGG
CTTGTAAAGGAGGCAAAGGCAAACCTTATACTAAAAGTGAAAGCTGCCTTCCTCCTCCGTCTAATCCTTGTGACAGAGGTTATAGTCCGATATATCGATGCAAGTCT

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

VTPTASSTSTSSSSCYLLSFNNAVTIVRSSMTPCNGSITECYAEEETLMESEISRRFLEQQKKYIIALKKDQPACKGGKGKPYTKSESCLPPPSNPCDRGYSPIYRCKS

MS008180 (gene) of Bitter gourd (TR) v1 genome