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MS008187 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008187
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein RALF-like 32
Genome locationscaffold45:69037..69387
RNA-Seq ExpressionMS008187
SyntenyMS008187
Gene Ontology termsGO:0019722 - calcium-mediated signaling (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067637.1 protein RALF-like 32 [Cucumis melo var. makuwa]2.0e-4275.61Show/hide
Query:  MRRRMSSKPMPSQPFFLLL------LFLLQASCLLQASFASPCNGSIAECNTEKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGS
        MRRR+SSKPM  QP FLLL      LFLLQ  CL++AS    CNGSIAEC +E EMLMESEISRRFL QQKKYISIGALKKD PACDG+  G+PYTKSGS
Subjt:  MRRRMSSKPMPSQPFFLLL------LFLLQASCLLQASFASPCNGSIAECNTEKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGS

Query:  CVPPPSNPYDRGCSKIYRCRSDD
        C PPP+NPYDRGC KIYRCRSDD
Subjt:  CVPPPSNPYDRGCSKIYRCRSDD

XP_004147646.3 protein RALF-like 32 [Cucumis sativus]8.4e-4174.17Show/hide
Query:  RRRMSSKPMPSQPFFLLL----LFLLQASCLLQASFASPCNGSIAECNTEKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGSCVP
        R+R+SSKPM  Q  FLLL    LFL Q  CL++AS    CNGSIAEC  E+EMLMESEI+RRFLEQQKKYISIGALKKD PACDG+  GQPYT+SGSC P
Subjt:  RRRMSSKPMPSQPFFLLL----LFLLQASCLLQASFASPCNGSIAECNTEKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGSCVP

Query:  PPSNPYDRGCSKIYRCRSDD
        PP+NPY+RGCSKIYRCRSDD
Subjt:  PPSNPYDRGCSKIYRCRSDD

XP_022138047.1 protein RALF-like 32 [Momordica charantia]1.7e-5797.44Show/hide
Query:  MRRRMSSKPMPSQPFFLLLLFLLQASCLLQASFASPCNGSIAECNTEKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGSCVPPPS
        MRRRMSSKP PSQPFFLLLLFLLQA CLL+ASFASPCNGSIAECNTEKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGSCVPPPS
Subjt:  MRRRMSSKPMPSQPFFLLLLFLLQASCLLQASFASPCNGSIAECNTEKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGSCVPPPS

Query:  NPYDRGCSKIYRCRSDD
        NPYDRGCSKIYRCRSDD
Subjt:  NPYDRGCSKIYRCRSDD

XP_023528073.1 protein RALF-like 32 [Cucurbita pepo subsp. pepo]1.1e-3776.42Show/hide
Query:  SQPFFLLLLFLLQASCLLQASFASPCNGSIAECNTEKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGSCVPPPSNPYDRGCSKIY
        S+  FLL L L+Q  CL++AS    CNGSIAEC  E+E LMESEISRRFLEQQKKYISIGALKKD PACDG G GQPYT+SGSC PPP+NPY+RGCSKIY
Subjt:  SQPFFLLLLFLLQASCLLQASFASPCNGSIAECNTEKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGSCVPPPSNPYDRGCSKIY

Query:  RCRSDD
        RCRSDD
Subjt:  RCRSDD

XP_038900965.1 protein RALF-like 32 [Benincasa hispida]9.9e-4277.5Show/hide
Query:  MRRRMSSKPMPSQPFFLLL---LFLLQASCLLQASFASPCNGSIAECNTEKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGSCVP
        MRRR+SSKP+  Q  FLLL   L LLQ  CL++A     CNGSIAEC +E+EMLMESEISRRFLEQ KKYISIGALKKD PACDGSG GQPYTKSGSCVP
Subjt:  MRRRMSSKPMPSQPFFLLL---LFLLQASCLLQASFASPCNGSIAECNTEKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGSCVP

Query:  PPSNPYDRGCSKIYRCRSDD
        PP+NPY RGCSKIYRCRSDD
Subjt:  PPSNPYDRGCSKIYRCRSDD

TrEMBL top hitse value%identityAlignment
A0A0A0L9A8 Uncharacterized protein2.0e-4073.33Show/hide
Query:  RRRMSSKPMPSQPFFLLL----LFLLQASCLLQASFASPCNGSIAECNTEKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGSCVP
        R+R+SSKPM  Q  FLLL    LFL Q  CL++AS    CNGSIA C  E+EMLMESEI+RRFLEQQKKYISIGALKKD PACDG+  GQPYT+SGSC P
Subjt:  RRRMSSKPMPSQPFFLLL----LFLLQASCLLQASFASPCNGSIAECNTEKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGSCVP

Query:  PPSNPYDRGCSKIYRCRSDD
        PP+NPY+RGCSKIYRCRSDD
Subjt:  PPSNPYDRGCSKIYRCRSDD

A0A5A7VKE5 Protein RALF-like 329.7e-4375.61Show/hide
Query:  MRRRMSSKPMPSQPFFLLL------LFLLQASCLLQASFASPCNGSIAECNTEKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGS
        MRRR+SSKPM  QP FLLL      LFLLQ  CL++AS    CNGSIAEC +E EMLMESEISRRFL QQKKYISIGALKKD PACDG+  G+PYTKSGS
Subjt:  MRRRMSSKPMPSQPFFLLL------LFLLQASCLLQASFASPCNGSIAECNTEKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGS

Query:  CVPPPSNPYDRGCSKIYRCRSDD
        C PPP+NPYDRGC KIYRCRSDD
Subjt:  CVPPPSNPYDRGCSKIYRCRSDD

A0A6J1C8Z5 protein RALF-like 323.6e-2979.01Show/hide
Query:  SPCNGSIAECNTEKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGSCVPPPSNPYDRGCSKIYRCRS
        +PCNGSIAEC  E+EMLMESEISRRFLEQQKKYIS   LKKD+PAC G G+G+PYTKS SC+PPPSNPYDRGC  IYRC+S
Subjt:  SPCNGSIAECNTEKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGSCVPPPSNPYDRGCSKIYRCRS

A0A6J1C9Y4 protein RALF-like 328.2e-5897.44Show/hide
Query:  MRRRMSSKPMPSQPFFLLLLFLLQASCLLQASFASPCNGSIAECNTEKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGSCVPPPS
        MRRRMSSKP PSQPFFLLLLFLLQA CLL+ASFASPCNGSIAECNTEKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGSCVPPPS
Subjt:  MRRRMSSKPMPSQPFFLLLLFLLQASCLLQASFASPCNGSIAECNTEKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGSCVPPPS

Query:  NPYDRGCSKIYRCRSDD
        NPYDRGCSKIYRCRSDD
Subjt:  NPYDRGCSKIYRCRSDD

A0A6J1GXB3 protein RALF-like 323.6e-3778.43Show/hide
Query:  FLLLLFLLQASCLLQASFASPCNGSIAECNTEKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGSCVPPPSNPYDRGCSKIYRCRS
        FLL L L+Q  CL++AS    CNGSIAEC  E E LMESEISRRFL QQKKYISIGALKKD PACDG G GQPYTKSGSC PPP+NPY+RGCSKIYRCRS
Subjt:  FLLLLFLLQASCLLQASFASPCNGSIAECNTEKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGSCVPPPSNPYDRGCSKIYRCRS

Query:  DD
        DD
Subjt:  DD

SwissProt top hitse value%identityAlignment
O23262 Protein RALF-like 328.5e-2048.25Show/hide
Query:  PSQPFFLLLLF---LLQASCLLQASFASPCNGSIAECNT-----EKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGSCVPPPSNP
        PS+ F  + +F   LL A    +AS +S CNGS+AEC++     E  ++MES  S+R  E+Q   +S GAL++++PACDG  RG+ Y  S  C+PPPSNP
Subjt:  PSQPFFLLLLF---LLQASCLLQASFASPCNGSIAECNT-----EKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGSCVPPPSNP

Query:  YDRGCSKIYRCRSD
        Y RGCSK YRC  D
Subjt:  YDRGCSKIYRCRSD

Q945T0 Rapid alkalinization factor5.2e-0946.67Show/hide
Query:  LLQASFASPCNGSIAECNTEKEML-MESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGSCVP-PPSNPYDRGCSKIYRCRS
        ++ A     C GSI EC  E+E   ++SE +RR L   KKYIS GAL+K+   C  S RG  Y    +C P   +NPY RGCS I RCRS
Subjt:  LLQASFASPCNGSIAECNTEKEML-MESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGSCVP-PPSNPYDRGCSKIYRCRS

Q9LK37 Protein RALF-like 243.1e-0641.77Show/hide
Query:  NGSIAECNTEKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGSCVPPPSNPYDRGCSKIYRCRSD
        NG I E   E E +M SEISRR +  +K+YIS   L++D   C   G      +SG      +N Y+RGCS I RC  D
Subjt:  NGSIAECNTEKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGSCVPPPSNPYDRGCSKIYRCRSD

Q9MA62 Protein RALF-like 223.6e-1047.06Show/hide
Query:  ASFASPCNGSIAEC-NTEKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGSCVPPPSNPYDRGCSKIYRCR
        +S  S C GSIAEC   E+EM  +S+ISRR L  QKKYIS GA++++   C   G      + G+     +NPY RGCS I RCR
Subjt:  ASFASPCNGSIAEC-NTEKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGSCVPPPSNPYDRGCSKIYRCR

Q9SRY3 Protein RALF-like 11.4e-0946.91Show/hide
Query:  SPCNGSIAECNTEKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGSCVPPPSNPYDRGCSKIYRCRS
        S C+GSIAEC   +E  M+SEI+RR L    KYIS  +LK++   C   G      ++G+     +NPY RGCSKI RCRS
Subjt:  SPCNGSIAECNTEKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGSCVPPPSNPYDRGCSKIYRCRS

Arabidopsis top hitse value%identityAlignment
AT1G02900.1 rapid alkalinization factor 19.6e-1146.91Show/hide
Query:  SPCNGSIAECNTEKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGSCVPPPSNPYDRGCSKIYRCRS
        S C+GSIAEC   +E  M+SEI+RR L    KYIS  +LK++   C   G      ++G+     +NPY RGCSKI RCRS
Subjt:  SPCNGSIAECNTEKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGSCVPPPSNPYDRGCSKIYRCRS

AT3G05490.1 ralf-like 222.5e-1147.06Show/hide
Query:  ASFASPCNGSIAEC-NTEKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGSCVPPPSNPYDRGCSKIYRCR
        +S  S C GSIAEC   E+EM  +S+ISRR L  QKKYIS GA++++   C   G      + G+     +NPY RGCS I RCR
Subjt:  ASFASPCNGSIAEC-NTEKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGSCVPPPSNPYDRGCSKIYRCR

AT3G23805.1 ralf-like 242.2e-0741.77Show/hide
Query:  NGSIAECNTEKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGSCVPPPSNPYDRGCSKIYRCRSD
        NG I E   E E +M SEISRR +  +K+YIS   L++D   C   G      +SG      +N Y+RGCS I RC  D
Subjt:  NGSIAECNTEKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGSCVPPPSNPYDRGCSKIYRCRSD

AT4G13950.1 ralf-like 313.2e-0641.43Show/hide
Query:  EKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGSCVPPPSNPYDRGCSKIYRCRSD
        E E LM +EISRR L  QK+YI    L++D   C   G      +SG      +N Y RGC  I RC  D
Subjt:  EKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGSCVPPPSNPYDRGCSKIYRCRSD

AT4G14010.1 ralf-like 326.0e-2148.25Show/hide
Query:  PSQPFFLLLLF---LLQASCLLQASFASPCNGSIAECNT-----EKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGSCVPPPSNP
        PS+ F  + +F   LL A    +AS +S CNGS+AEC++     E  ++MES  S+R  E+Q   +S GAL++++PACDG  RG+ Y  S  C+PPPSNP
Subjt:  PSQPFFLLLLF---LLQASCLLQASFASPCNGSIAECNT-----EKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGSCVPPPSNP

Query:  YDRGCSKIYRCRSD
        Y RGCSK YRC  D
Subjt:  YDRGCSKIYRCRSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAGAAGAATGTCAAGCAAGCCAATGCCTTCACAACCTTTCTTTTTGCTTCTCCTCTTCCTCCTTCAAGCTTCATGTCTCCTTCAAGCTTCGTTCGCGAGCCCTTG
CAACGGCTCGATAGCTGAGTGCAACACCGAGAAGGAGATGTTGATGGAATCGGAGATAAGTCGGAGGTTTCTCGAACAACAAAAGAAATACATCTCTATTGGAGCCTTAA
AGAAGGATCGACCTGCTTGCGATGGCAGTGGCAGAGGCCAACCATACACCAAAAGCGGAAGCTGCGTTCCACCACCGTCCAATCCTTACGATCGAGGCTGCTCTAAGATA
TATCGTTGTAGGTCTGATGAT
mRNA sequenceShow/hide mRNA sequence
ATGAGAAGAAGAATGTCAAGCAAGCCAATGCCTTCACAACCTTTCTTTTTGCTTCTCCTCTTCCTCCTTCAAGCTTCATGTCTCCTTCAAGCTTCGTTCGCGAGCCCTTG
CAACGGCTCGATAGCTGAGTGCAACACCGAGAAGGAGATGTTGATGGAATCGGAGATAAGTCGGAGGTTTCTCGAACAACAAAAGAAATACATCTCTATTGGAGCCTTAA
AGAAGGATCGACCTGCTTGCGATGGCAGTGGCAGAGGCCAACCATACACCAAAAGCGGAAGCTGCGTTCCACCACCGTCCAATCCTTACGATCGAGGCTGCTCTAAGATA
TATCGTTGTAGGTCTGATGAT
Protein sequenceShow/hide protein sequence
MRRRMSSKPMPSQPFFLLLLFLLQASCLLQASFASPCNGSIAECNTEKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGSCVPPPSNPYDRGCSKI
YRCRSDD