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MS008224 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008224
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionStress-response A/B barrel domain-containing protein
Genome locationscaffold45:402033..406405
RNA-Seq ExpressionMS008224
SyntenyMS008224
Gene Ontology termsGO:0009865 - pollen tube adhesion (biological process)
InterPro domainsIPR011008 - Dimeric alpha-beta barrel
IPR013097 - Stress responsive alpha-beta barrel
IPR044662 - Stress-response A/B barrel domain-containing protein HS1/DABB1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022137755.1 stress-response A/B barrel domain-containing protein HS1 [Momordica charantia]2.1e-54100Show/hide
Query:  MEGGKRIVKHILLAKFKDEITEDQIDKLIKGYANLINLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTQGIAEYISHPAHVEFANLFLASLDKVIVI
        MEGGKRIVKHILLAKFKDEITEDQIDKLIKGYANLINLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTQGIAEYISHPAHVEFANLFLASLDKVIVI
Subjt:  MEGGKRIVKHILLAKFKDEITEDQIDKLIKGYANLINLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTQGIAEYISHPAHVEFANLFLASLDKVIVI

Query:  DYKPTLIHS
        DYKPTLIHS
Subjt:  DYKPTLIHS

XP_022955948.1 stress-response A/B barrel domain-containing protein HS1 [Cucurbita moschata]1.7e-4890.83Show/hide
Query:  MEGGKRIVKHILLAKFKDEITEDQIDKLIKGYANLINLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTQGIAEYISHPAHVEFANLFLASLDKVIVI
        ME  K IVKHILLAKFKD ITE+QID+LIKGYANL+NLIEPMKAFQCGKDVSIENLHQGFTHVFESTFEST+GIAEY+SHPAHVEFANLFLASLDKVIVI
Subjt:  MEGGKRIVKHILLAKFKDEITEDQIDKLIKGYANLINLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTQGIAEYISHPAHVEFANLFLASLDKVIVI

Query:  DYKPTLIHS
        DYK TLIHS
Subjt:  DYKPTLIHS

XP_022979995.1 stress-response A/B barrel domain-containing protein HS1 [Cucurbita maxima]3.0e-4889.91Show/hide
Query:  MEGGKRIVKHILLAKFKDEITEDQIDKLIKGYANLINLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTQGIAEYISHPAHVEFANLFLASLDKVIVI
        ME  K IVKHILLAKFKD ITE+QID+LIKGYANL+NLIEPMKAFQCGKDVSIENLHQGFTHVFESTFEST+GIAEY+SHPAHVEFANLFLASLDKVIVI
Subjt:  MEGGKRIVKHILLAKFKDEITEDQIDKLIKGYANLINLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTQGIAEYISHPAHVEFANLFLASLDKVIVI

Query:  DYKPTLIHS
        DYK T+IHS
Subjt:  DYKPTLIHS

XP_023527594.1 stress-response A/B barrel domain-containing protein HS1 [Cucurbita pepo subsp. pepo]1.9e-4788.07Show/hide
Query:  MEGGKRIVKHILLAKFKDEITEDQIDKLIKGYANLINLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTQGIAEYISHPAHVEFANLFLASLDKVIVI
        ME  K IVKHILLAKFKD I E+QID+LIKGYANL+NLIEPMKAFQCGKDVSIENLHQGFTHVFESTFEST+GIAEY+SHPAHVEFANLFLASLDKV+VI
Subjt:  MEGGKRIVKHILLAKFKDEITEDQIDKLIKGYANLINLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTQGIAEYISHPAHVEFANLFLASLDKVIVI

Query:  DYKPTLIHS
        DYK T+IHS
Subjt:  DYKPTLIHS

XP_038893347.1 stress-response A/B barrel domain-containing protein HS1-like [Benincasa hispida]2.7e-4989.91Show/hide
Query:  MEGGKRIVKHILLAKFKDEITEDQIDKLIKGYANLINLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTQGIAEYISHPAHVEFANLFLASLDKVIVI
        M   K +VKHILLAKFKDEITE+QIDKLIKGYANL+NLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTQGIAEY+SHPAHVE+ANLFL+SLDKVIVI
Subjt:  MEGGKRIVKHILLAKFKDEITEDQIDKLIKGYANLINLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTQGIAEYISHPAHVEFANLFLASLDKVIVI

Query:  DYKPTLIHS
        DYKPTLIH+
Subjt:  DYKPTLIHS

TrEMBL top hitse value%identityAlignment
A0A0A0L972 Stress-response A/B barrel domain-containing protein5.1e-4687.85Show/hide
Query:  MEGGKRIVKHILLAKFKDEITEDQIDKLIKGYANLINLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTQGIAEYISHPAHVEFANLFLASLDKVIVI
        M   K +VKHILLAKFK+ I+E+QID+LIKGYANL+NLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTQGIAEYISHPAHVEFAN FL+SLDKVIVI
Subjt:  MEGGKRIVKHILLAKFKDEITEDQIDKLIKGYANLINLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTQGIAEYISHPAHVEFANLFLASLDKVIVI

Query:  DYKPTLI
        DYKPTLI
Subjt:  DYKPTLI

A0A1S3AYB2 stress-response A/B barrel domain-containing protein HS13.9e-4687.85Show/hide
Query:  MEGGKRIVKHILLAKFKDEITEDQIDKLIKGYANLINLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTQGIAEYISHPAHVEFANLFLASLDKVIVI
        M   K +VKHILLAKFKD I E+QID+LIKGYANL+NLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTQGIAEYISHPAHVEFAN FL+SLDKVIVI
Subjt:  MEGGKRIVKHILLAKFKDEITEDQIDKLIKGYANLINLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTQGIAEYISHPAHVEFANLFLASLDKVIVI

Query:  DYKPTLI
        DYKPTL+
Subjt:  DYKPTLI

A0A6J1C7K4 stress-response A/B barrel domain-containing protein HS11.0e-54100Show/hide
Query:  MEGGKRIVKHILLAKFKDEITEDQIDKLIKGYANLINLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTQGIAEYISHPAHVEFANLFLASLDKVIVI
        MEGGKRIVKHILLAKFKDEITEDQIDKLIKGYANLINLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTQGIAEYISHPAHVEFANLFLASLDKVIVI
Subjt:  MEGGKRIVKHILLAKFKDEITEDQIDKLIKGYANLINLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTQGIAEYISHPAHVEFANLFLASLDKVIVI

Query:  DYKPTLIHS
        DYKPTLIHS
Subjt:  DYKPTLIHS

A0A6J1GVE7 stress-response A/B barrel domain-containing protein HS18.4e-4990.83Show/hide
Query:  MEGGKRIVKHILLAKFKDEITEDQIDKLIKGYANLINLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTQGIAEYISHPAHVEFANLFLASLDKVIVI
        ME  K IVKHILLAKFKD ITE+QID+LIKGYANL+NLIEPMKAFQCGKDVSIENLHQGFTHVFESTFEST+GIAEY+SHPAHVEFANLFLASLDKVIVI
Subjt:  MEGGKRIVKHILLAKFKDEITEDQIDKLIKGYANLINLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTQGIAEYISHPAHVEFANLFLASLDKVIVI

Query:  DYKPTLIHS
        DYK TLIHS
Subjt:  DYKPTLIHS

A0A6J1IUX3 stress-response A/B barrel domain-containing protein HS11.4e-4889.91Show/hide
Query:  MEGGKRIVKHILLAKFKDEITEDQIDKLIKGYANLINLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTQGIAEYISHPAHVEFANLFLASLDKVIVI
        ME  K IVKHILLAKFKD ITE+QID+LIKGYANL+NLIEPMKAFQCGKDVSIENLHQGFTHVFESTFEST+GIAEY+SHPAHVEFANLFLASLDKVIVI
Subjt:  MEGGKRIVKHILLAKFKDEITEDQIDKLIKGYANLINLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTQGIAEYISHPAHVEFANLFLASLDKVIVI

Query:  DYKPTLIHS
        DYK T+IHS
Subjt:  DYKPTLIHS

SwissProt top hitse value%identityAlignment
I6WU39 Olivetolic acid cyclase6.5e-2247.42Show/hide
Query:  VKHILLAKFKDEITEDQIDKLIKGYANLINLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTQGIAEYISHPAHVEFANLFLASLDKVIVIDYKP
        VKH+++ KFKDEITE Q ++  K Y NL+N+I  MK    GKDV+ +N  +G+TH+ E TFES + I +YI HPAHV F +++ +  +K+++ DY P
Subjt:  VKHILLAKFKDEITEDQIDKLIKGYANLINLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTQGIAEYISHPAHVEFANLFLASLDKVIVIDYKP

Q9FK81 Stress-response A/B barrel domain-containing protein At5g225802.8e-1739.22Show/hide
Query:  KHILLAKFKDEITEDQIDKLIKGYANLINLIEPMKAFQCGKD-VSIENLHQGFTHVFESTFESTQGIAEYISHPAHVEFANLFLASLDKVIVIDYKPTLI
        KH+++ KFK+   + ++D+++KG  NL++ I+ +K+F+ G+D  S + L QGFTH F  TFE+  G   + SHP HVEF+  F A +DK++++D+    +
Subjt:  KHILLAKFKDEITEDQIDKLIKGYANLINLIEPMKAFQCGKD-VSIENLHQGFTHVFESTFESTQGIAEYISHPAHVEFANLFLASLDKVIVIDYKPTLI

Query:  HS
         S
Subjt:  HS

Q9LUV2 Stress-response A/B barrel domain-containing protein HS18.1e-4171.96Show/hide
Query:  MEGGKRIVKHILLAKFKDEITEDQIDKLIKGYANLINLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTQGIAEYISHPAHVEFANLFLASLDKVIVI
        ME  K  VKH+LLA FKD ++ ++I++LIKGYANL+NLIEPMKAF  GKDVSIENLHQG+TH+FESTFES + +AEYI+HPAHVEFA +FL SLDKV+VI
Subjt:  MEGGKRIVKHILLAKFKDEITEDQIDKLIKGYANLINLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTQGIAEYISHPAHVEFANLFLASLDKVIVI

Query:  DYKPTLI
        DYKPT +
Subjt:  DYKPTLI

Q9SIP1 Stress-response A/B barrel domain-containing protein UP32.1e-0429.13Show/hide
Query:  RIVKHILLAKFKDEITEDQIDKLIKGYANLINLIEPMKAFQCGKDVSIENLHQ-----GFTHVFESTFESTQGIAEYISHPAHVEFA-NLFLASLDKVIV
        +I++HI+L K KD+    +I  +I     L  L + +        +S   LH+      FTHV  S +ES + +A Y +HP HV       L   D ++ 
Subjt:  RIVKHILLAKFKDEITEDQIDKLIKGYANLINLIEPMKAFQCGKDVSIENLHQ-----GFTHVFESTFESTQGIAEYISHPAHVEFA-NLFLASLDKVIV

Query:  IDY
        +D+
Subjt:  IDY

Arabidopsis top hitse value%identityAlignment
AT2G31670.1 Stress responsive alpha-beta barrel domain protein1.5e-0529.13Show/hide
Query:  RIVKHILLAKFKDEITEDQIDKLIKGYANLINLIEPMKAFQCGKDVSIENLHQ-----GFTHVFESTFESTQGIAEYISHPAHVEFA-NLFLASLDKVIV
        +I++HI+L K KD+    +I  +I     L  L + +        +S   LH+      FTHV  S +ES + +A Y +HP HV       L   D ++ 
Subjt:  RIVKHILLAKFKDEITEDQIDKLIKGYANLINLIEPMKAFQCGKDVSIENLHQ-----GFTHVFESTFESTQGIAEYISHPAHVEFA-NLFLASLDKVIV

Query:  IDY
        +D+
Subjt:  IDY

AT3G17210.1 heat stable protein 15.8e-4271.96Show/hide
Query:  MEGGKRIVKHILLAKFKDEITEDQIDKLIKGYANLINLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTQGIAEYISHPAHVEFANLFLASLDKVIVI
        ME  K  VKH+LLA FKD ++ ++I++LIKGYANL+NLIEPMKAF  GKDVSIENLHQG+TH+FESTFES + +AEYI+HPAHVEFA +FL SLDKV+VI
Subjt:  MEGGKRIVKHILLAKFKDEITEDQIDKLIKGYANLINLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTQGIAEYISHPAHVEFANLFLASLDKVIVI

Query:  DYKPTLI
        DYKPT +
Subjt:  DYKPTLI

AT5G22580.1 Stress responsive A/B Barrel Domain2.0e-1839.22Show/hide
Query:  KHILLAKFKDEITEDQIDKLIKGYANLINLIEPMKAFQCGKD-VSIENLHQGFTHVFESTFESTQGIAEYISHPAHVEFANLFLASLDKVIVIDYKPTLI
        KH+++ KFK+   + ++D+++KG  NL++ I+ +K+F+ G+D  S + L QGFTH F  TFE+  G   + SHP HVEF+  F A +DK++++D+    +
Subjt:  KHILLAKFKDEITEDQIDKLIKGYANLINLIEPMKAFQCGKD-VSIENLHQGFTHVFESTFESTQGIAEYISHPAHVEFANLFLASLDKVIVIDYKPTLI

Query:  HS
         S
Subjt:  HS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGAGGGAAACGCATTGTGAAGCACATATTGCTGGCAAAATTCAAAGATGAAATCACAGAAGATCAGATCGACAAACTCATCAAGGGCTATGCCAATCTCATCAA
TCTCATCGAACCTATGAAGGCTTTCCAGTGTGGCAAGGATGTTAGCATTGAAAATCTACACCAAGGTTTCACTCACGTCTTTGAATCCACCTTCGAGAGCACACAGGGCA
TAGCAGAGTATATATCTCATCCAGCACATGTGGAATTTGCAAACTTGTTCCTTGCTTCCTTGGACAAGGTCATCGTTATCGACTACAAACCGACCTTAATTCACAGC
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGAGGGAAACGCATTGTGAAGCACATATTGCTGGCAAAATTCAAAGATGAAATCACAGAAGATCAGATCGACAAACTCATCAAGGGCTATGCCAATCTCATCAA
TCTCATCGAACCTATGAAGGCTTTCCAGTGTGGCAAGGATGTTAGCATTGAAAATCTACACCAAGGTTTCACTCACGTCTTTGAATCCACCTTCGAGAGCACACAGGGCA
TAGCAGAGTATATATCTCATCCAGCACATGTGGAATTTGCAAACTTGTTCCTTGCTTCCTTGGACAAGGTCATCGTTATCGACTACAAACCGACCTTAATTCACAGC
Protein sequenceShow/hide protein sequence
MEGGKRIVKHILLAKFKDEITEDQIDKLIKGYANLINLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTQGIAEYISHPAHVEFANLFLASLDKVIVIDYKPTLIHS