; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS008236 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008236
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 4
Genome locationscaffold45:502712..502963
RNA-Seq ExpressionMS008236
SyntenyMS008236
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR010658 - Nodulin-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF2322745.1 hypothetical protein GH714_030103 [Hevea brasiliensis]1.8e-1354.76Show/hide
Query:  FLNTATATFSDLCIALFSDNPSSFLFMLTFIPFVICLFVMFFLREIHPHHIVAAKVQEEEFNYFAIFNDPFIVVALYLLGFNLI
        ++  +TA F+DLC ALFSDNPSSFL ML  IPF +CL  + FLREI P     A+ ++EEF YF++FN   IVVA+YLL F+ +
Subjt:  FLNTATATFSDLCIALFSDNPSSFLFMLTFIPFVICLFVMFFLREIHPHHIVAAKVQEEEFNYFAIFNDPFIVVALYLLGFNLI

XP_008457674.1 PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4 [Cucumis melo]2.4e-1352.38Show/hide
Query:  FLNTATATFSDLCIALFSDNPSSFLFMLTFIPFVICLFVMFFLREIHPHHIVAAKVQEEEFNYFAIFNDPFIVVALYLLGFNLI
        ++  +TA F+DLC ALFS +PSSFL ML+ +PF +CLF MFFLREI     + A   ++E NYF++FN   +VVA+YLL F+ I
Subjt:  FLNTATATFSDLCIALFSDNPSSFLFMLTFIPFVICLFVMFFLREIHPHHIVAAKVQEEEFNYFAIFNDPFIVVALYLLGFNLI

XP_021663601.1 protein NUCLEAR FUSION DEFECTIVE 4-like [Hevea brasiliensis]1.8e-1354.76Show/hide
Query:  FLNTATATFSDLCIALFSDNPSSFLFMLTFIPFVICLFVMFFLREIHPHHIVAAKVQEEEFNYFAIFNDPFIVVALYLLGFNLI
        ++  +TA F+DLC ALFSDNPSSFL ML  IPF +CL  + FLREI P     A+ ++EEF YF++FN   IVVA+YLL F+ +
Subjt:  FLNTATATFSDLCIALFSDNPSSFLFMLTFIPFVICLFVMFFLREIHPHHIVAAKVQEEEFNYFAIFNDPFIVVALYLLGFNLI

XP_023512913.1 protein NUCLEAR FUSION DEFECTIVE 4-like isoform X1 [Cucurbita pepo subsp. pepo]2.4e-1354.65Show/hide
Query:  FLNTATATFSDLCIALFSDNPSSFLFMLTFIPFVICLFVMFFLREIHPHHIV--AAKVQEEEFNYFAIFNDPFIVVALYLLGFNLI
        ++  +TA F+DLC ALFSD+PSSFL ML+ +PF +CLF MFFLREI P      AA   +EE N+FA+FN   ++VA+YLL F+ I
Subjt:  FLNTATATFSDLCIALFSDNPSSFLFMLTFIPFVICLFVMFFLREIHPHHIV--AAKVQEEEFNYFAIFNDPFIVVALYLLGFNLI

XP_038902519.1 protein NUCLEAR FUSION DEFECTIVE 4-like [Benincasa hispida]8.2e-1453.57Show/hide
Query:  FLNTATATFSDLCIALFSDNPSSFLFMLTFIPFVICLFVMFFLREIHPHHIVAAKVQEEEFNYFAIFNDPFIVVALYLLGFNLI
        ++  +TA F+DLC ALFS NPS FL ML F+PF +CLF MFFLREI P     A   ++E +YF++FN   +VVA+YLL F+ I
Subjt:  FLNTATATFSDLCIALFSDNPSSFLFMLTFIPFVICLFVMFFLREIHPHHIVAAKVQEEEFNYFAIFNDPFIVVALYLLGFNLI

TrEMBL top hitse value%identityAlignment
A0A1S3C607 protein NUCLEAR FUSION DEFECTIVE 41.2e-1352.38Show/hide
Query:  FLNTATATFSDLCIALFSDNPSSFLFMLTFIPFVICLFVMFFLREIHPHHIVAAKVQEEEFNYFAIFNDPFIVVALYLLGFNLI
        ++  +TA F+DLC ALFS +PSSFL ML+ +PF +CLF MFFLREI     + A   ++E NYF++FN   +VVA+YLL F+ I
Subjt:  FLNTATATFSDLCIALFSDNPSSFLFMLTFIPFVICLFVMFFLREIHPHHIVAAKVQEEEFNYFAIFNDPFIVVALYLLGFNLI

A0A5A7TQ90 Protein NUCLEAR FUSION DEFECTIVE 41.2e-1352.38Show/hide
Query:  FLNTATATFSDLCIALFSDNPSSFLFMLTFIPFVICLFVMFFLREIHPHHIVAAKVQEEEFNYFAIFNDPFIVVALYLLGFNLI
        ++  +TA F+DLC ALFS +PSSFL ML+ +PF +CLF MFFLREI     + A   ++E NYF++FN   +VVA+YLL F+ I
Subjt:  FLNTATATFSDLCIALFSDNPSSFLFMLTFIPFVICLFVMFFLREIHPHHIVAAKVQEEEFNYFAIFNDPFIVVALYLLGFNLI

A0A5D3BKA2 Protein NUCLEAR FUSION DEFECTIVE 41.2e-1352.38Show/hide
Query:  FLNTATATFSDLCIALFSDNPSSFLFMLTFIPFVICLFVMFFLREIHPHHIVAAKVQEEEFNYFAIFNDPFIVVALYLLGFNLI
        ++  +TA F+DLC ALFS +PSSFL ML+ +PF +CLF MFFLREI     + A   ++E NYF++FN   +VVA+YLL F+ I
Subjt:  FLNTATATFSDLCIALFSDNPSSFLFMLTFIPFVICLFVMFFLREIHPHHIVAAKVQEEEFNYFAIFNDPFIVVALYLLGFNLI

A0A6A6NCR4 Nodulin-like domain-containing protein8.8e-1454.76Show/hide
Query:  FLNTATATFSDLCIALFSDNPSSFLFMLTFIPFVICLFVMFFLREIHPHHIVAAKVQEEEFNYFAIFNDPFIVVALYLLGFNLI
        ++  +TA F+DLC ALFSDNPSSFL ML  IPF +CL  + FLREI P     A+ ++EEF YF++FN   IVVA+YLL F+ +
Subjt:  FLNTATATFSDLCIALFSDNPSSFLFMLTFIPFVICLFVMFFLREIHPHHIVAAKVQEEEFNYFAIFNDPFIVVALYLLGFNLI

A0A6J1FUJ7 protein NUCLEAR FUSION DEFECTIVE 4-like1.2e-1354.65Show/hide
Query:  FLNTATATFSDLCIALFSDNPSSFLFMLTFIPFVICLFVMFFLREIHPHHIV--AAKVQEEEFNYFAIFNDPFIVVALYLLGFNLI
        ++  +TA F+DLC ALFSD+PSSFL ML+ +PF +CLF MFFLREI P      AA   +EE N+FA+FN   ++VA+YLL F+ I
Subjt:  FLNTATATFSDLCIALFSDNPSSFLFMLTFIPFVICLFVMFFLREIHPHHIV--AAKVQEEEFNYFAIFNDPFIVVALYLLGFNLI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G16660.1 Major facilitator superfamily protein6.7e-1447.62Show/hide
Query:  FLNTATATFSDLCIALFSDNPSSFLFMLTFIPFVICLFVMFFLREIHPHHIVAAKVQEEEFNYFAIFNDPFIVVALYLLGFNLI
        ++  +TA F+DLC ALFS++P+SFL +L  +PF +CL  +FFLREI P    +A  + EE  YF IFN   +VVA+YL  +++I
Subjt:  FLNTATATFSDLCIALFSDNPSSFLFMLTFIPFVICLFVMFFLREIHPHHIVAAKVQEEEFNYFAIFNDPFIVVALYLLGFNLI

AT4G34950.1 Major facilitator superfamily protein1.5e-1347.62Show/hide
Query:  FLNTATATFSDLCIALFSDNPSSFLFMLTFIPFVICLFVMFFLREIHPHHIVAAKVQEEEFNYFAIFNDPFIVVALYLLGFNLI
        ++  +TA F+DLC ALFS +P+SFL +L+ +PF +CL  +FFLREI P    A     EE  YFA+FN   +VVA+YL  +++I
Subjt:  FLNTATATFSDLCIALFSDNPSSFLFMLTFIPFVICLFVMFFLREIHPHHIVAAKVQEEEFNYFAIFNDPFIVVALYLLGFNLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTCCTCAACACCGCCACCGCCACCTTTTCGGATCTCTGCATTGCCCTCTTCTCCGACAACCCCTCCTCCTTCCTTTTCATGCTCACTTTCATCCCCTTCGTCATCTGCCT
CTTCGTCATGTTCTTCCTCCGAGAGATCCACCCCCACCATATCGTTGCAGCCAAAGTTCAAGAAGAGGAGTTCAACTACTTCGCCATCTTCAATGACCCCTTCATTGTCG
TCGCTCTTTATTTATTGGGCTTCAATTTGATC
mRNA sequenceShow/hide mRNA sequence
TTCCTCAACACCGCCACCGCCACCTTTTCGGATCTCTGCATTGCCCTCTTCTCCGACAACCCCTCCTCCTTCCTTTTCATGCTCACTTTCATCCCCTTCGTCATCTGCCT
CTTCGTCATGTTCTTCCTCCGAGAGATCCACCCCCACCATATCGTTGCAGCCAAAGTTCAAGAAGAGGAGTTCAACTACTTCGCCATCTTCAATGACCCCTTCATTGTCG
TCGCTCTTTATTTATTGGGCTTCAATTTGATC
Protein sequenceShow/hide protein sequence
FLNTATATFSDLCIALFSDNPSSFLFMLTFIPFVICLFVMFFLREIHPHHIVAAKVQEEEFNYFAIFNDPFIVVALYLLGFNLI