; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS008238 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008238
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncalmodulin
Genome locationscaffold45:530795..531238
RNA-Seq ExpressionMS008238
SyntenyMS008238
Gene Ontology termsGO:0042538 - hyperosmotic salinity response (biological process)
GO:0005829 - cytosol (cellular component)
GO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022138085.1 calmodulin-A [Momordica charantia]2.1e-7397.35Show/hide
Query:  MCPSGTA---AASPADFRQAFEVLDADRDGKISRDDLRNFYSADADEDAIGSMILVADLNRNGFVEYDEFERVLSGGRRRSAGIMEEVFKAMDKDGDGRL
        MCPSGTA   A SPADFRQAFEVLDADRDGKISRDDLRNFYSADADEDAIGSMILVADLNRNGFVEYDEFERVLSGGRRRSAGIMEEVFKAMDKDGDGRL
Subjt:  MCPSGTA---AASPADFRQAFEVLDADRDGKISRDDLRNFYSADADEDAIGSMILVADLNRNGFVEYDEFERVLSGGRRRSAGIMEEVFKAMDKDGDGRL

Query:  SHADLKSYMHLAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKILAVDNIF
        SHADLKSYMHLAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKILAVDNIF
Subjt:  SHADLKSYMHLAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKILAVDNIF

XP_022955465.1 calmodulin-beta-like [Cucurbita moschata]3.2e-6182.24Show/hide
Query:  MCPSGTAAA----SPADFRQAFEVLDADRDGKISRDDLRNFYSADADEDAIGSMILVADLNRNGFVEYDEFERVLSGGRRRSAGIMEEVFKAMDKDGDGR
        MCPSGTAA+    +PA FRQAFE LDAD DGKISRDDLR FYS DADEDAI SMI VADLNRNGFVEY+EFERVLS GRRRS GIMEEVFK MDKDGDGR
Subjt:  MCPSGTAAA----SPADFRQAFEVLDADRDGKISRDDLRNFYSADADEDAIGSMILVADLNRNGFVEYDEFERVLSGGRRRSAGIMEEVFKAMDKDGDGR

Query:  LSHADLKSYMHLAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKILAVDNIF
        LSHADLKSYMH AGFSI+DEEV AMIRFGG DE++GVSY+GLLKIL+VDN++
Subjt:  LSHADLKSYMHLAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKILAVDNIF

XP_022979972.1 calmodulin-A-like [Cucurbita maxima]3.2e-6182.24Show/hide
Query:  MCPSGTAAA----SPADFRQAFEVLDADRDGKISRDDLRNFYSADADEDAIGSMILVADLNRNGFVEYDEFERVLSGGRRRSAGIMEEVFKAMDKDGDGR
        MCPSGTAA+    +PA FRQAFE LDAD DGKISRDDLR FYS DADEDAI SMI VADLNRNGFVEY+EFERVLS GRRRS GIMEEVFK MDKDGDGR
Subjt:  MCPSGTAAA----SPADFRQAFEVLDADRDGKISRDDLRNFYSADADEDAIGSMILVADLNRNGFVEYDEFERVLSGGRRRSAGIMEEVFKAMDKDGDGR

Query:  LSHADLKSYMHLAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKILAVDNIF
        LSHADLKSYMH AGFSI+DEEV AMI+FGG DE++GVSY+GLLKILAVDN++
Subjt:  LSHADLKSYMHLAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKILAVDNIF

XP_023526324.1 calmodulin-beta-like [Cucurbita pepo subsp. pepo]7.1e-6181.58Show/hide
Query:  MCPSGTAAA----SPADFRQAFEVLDADRDGKISRDDLRNFYSADADEDAIGSMILVADLNRNGFVEYDEFERVLSGGRRRSAGIMEEVFKAMDKDGDGR
        MCPSGTAA+    +PA FRQAFE LDAD DGKISRDDLR FYS DADEDAI SMI VADLNRNGFVEY+EFERVLS GRRRS GIMEEVFK MDKDGDGR
Subjt:  MCPSGTAAA----SPADFRQAFEVLDADRDGKISRDDLRNFYSADADEDAIGSMILVADLNRNGFVEYDEFERVLSGGRRRSAGIMEEVFKAMDKDGDGR

Query:  LSHADLKSYMHLAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKILAVDNIF
        LSHADLKSYMH AGFSI+DEEV AMIRFGG D+++GVSY+GLLKIL+VDN++
Subjt:  LSHADLKSYMHLAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKILAVDNIF

XP_038891278.1 calcium-binding protein CP1 [Benincasa hispida]1.4e-6183.01Show/hide
Query:  MCPSGTAAAS---PADFRQAFEVLDADRDGKISRDDLRNFYS--ADADEDAIGSMILVADLNRNGFVEYDEFERVLSGGRRRSAGIMEEVFKAMDKDGDG
        MCPSGT++      ADFRQAFE LDAD DGKIS DDLR FYS   DADED IGSMI VADLNRNGFVEY+EFERVLSGGRRRS GIMEEVFK MDKDGDG
Subjt:  MCPSGTAAAS---PADFRQAFEVLDADRDGKISRDDLRNFYS--ADADEDAIGSMILVADLNRNGFVEYDEFERVLSGGRRRSAGIMEEVFKAMDKDGDG

Query:  RLSHADLKSYMHLAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKILAVDNIF
        RLSHADLKSYMHLAGFSI+DEEVAAMIRFGG DE++GV Y+GLLKILAVDNIF
Subjt:  RLSHADLKSYMHLAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKILAVDNIF

TrEMBL top hitse value%identityAlignment
A0A0A0L828 Uncharacterized protein2.9e-6080Show/hide
Query:  MCPSGTAAASPAD-----FRQAFEVLDADRDGKISRDDLRNFYS--ADADEDAIGSMILVADLNRNGFVEYDEFERVLSGGRRRSAGIMEEVFKAMDKDG
        MCPSGTA+   +D     FRQAFEVLDAD DGKISRDDLR FYS   DADEDAIGSMI  ADLNRNG VEY+EFERVLSGGRRRS GIMEEVFK MDKDG
Subjt:  MCPSGTAAASPAD-----FRQAFEVLDADRDGKISRDDLRNFYS--ADADEDAIGSMILVADLNRNGFVEYDEFERVLSGGRRRSAGIMEEVFKAMDKDG

Query:  DGRLSHADLKSYMHLAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKILAVDNIF
        DGRLSH DLKSYMHLAGFSI+DEEV AMIRFGG DE++GV Y+GLLKILAVDN++
Subjt:  DGRLSHADLKSYMHLAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKILAVDNIF

A0A5D3CXZ4 Calmodulin2.9e-6079.87Show/hide
Query:  MCPSGTAA----ASPADFRQAFEVLDADRDGKISRDDLRNFYS--ADADEDAIGSMILVADLNRNGFVEYDEFERVLSGGRRRSAGIMEEVFKAMDKDGD
        MCPSGTA+     +   FRQAFEVLDAD DGKISRDDLR FYS   DADEDAIGSMI  ADLNRNG VEY+EFERVLSGGRRRS GIMEEVFK MDKDGD
Subjt:  MCPSGTAA----ASPADFRQAFEVLDADRDGKISRDDLRNFYS--ADADEDAIGSMILVADLNRNGFVEYDEFERVLSGGRRRSAGIMEEVFKAMDKDGD

Query:  GRLSHADLKSYMHLAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKILAVDNIF
        GRLSHADLKSYMHLAGFSI+DEEV AMIRFGG DE++GV Y+GLLKILA+DN++
Subjt:  GRLSHADLKSYMHLAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKILAVDNIF

A0A6J1C8G1 calmodulin-A1.0e-7397.35Show/hide
Query:  MCPSGTA---AASPADFRQAFEVLDADRDGKISRDDLRNFYSADADEDAIGSMILVADLNRNGFVEYDEFERVLSGGRRRSAGIMEEVFKAMDKDGDGRL
        MCPSGTA   A SPADFRQAFEVLDADRDGKISRDDLRNFYSADADEDAIGSMILVADLNRNGFVEYDEFERVLSGGRRRSAGIMEEVFKAMDKDGDGRL
Subjt:  MCPSGTA---AASPADFRQAFEVLDADRDGKISRDDLRNFYSADADEDAIGSMILVADLNRNGFVEYDEFERVLSGGRRRSAGIMEEVFKAMDKDGDGRL

Query:  SHADLKSYMHLAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKILAVDNIF
        SHADLKSYMHLAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKILAVDNIF
Subjt:  SHADLKSYMHLAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKILAVDNIF

A0A6J1GV73 calmodulin-beta-like1.5e-6182.24Show/hide
Query:  MCPSGTAAA----SPADFRQAFEVLDADRDGKISRDDLRNFYSADADEDAIGSMILVADLNRNGFVEYDEFERVLSGGRRRSAGIMEEVFKAMDKDGDGR
        MCPSGTAA+    +PA FRQAFE LDAD DGKISRDDLR FYS DADEDAI SMI VADLNRNGFVEY+EFERVLS GRRRS GIMEEVFK MDKDGDGR
Subjt:  MCPSGTAAA----SPADFRQAFEVLDADRDGKISRDDLRNFYSADADEDAIGSMILVADLNRNGFVEYDEFERVLSGGRRRSAGIMEEVFKAMDKDGDGR

Query:  LSHADLKSYMHLAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKILAVDNIF
        LSHADLKSYMH AGFSI+DEEV AMIRFGG DE++GVSY+GLLKIL+VDN++
Subjt:  LSHADLKSYMHLAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKILAVDNIF

A0A6J1IQ64 calmodulin-A-like1.5e-6182.24Show/hide
Query:  MCPSGTAAA----SPADFRQAFEVLDADRDGKISRDDLRNFYSADADEDAIGSMILVADLNRNGFVEYDEFERVLSGGRRRSAGIMEEVFKAMDKDGDGR
        MCPSGTAA+    +PA FRQAFE LDAD DGKISRDDLR FYS DADEDAI SMI VADLNRNGFVEY+EFERVLS GRRRS GIMEEVFK MDKDGDGR
Subjt:  MCPSGTAAA----SPADFRQAFEVLDADRDGKISRDDLRNFYSADADEDAIGSMILVADLNRNGFVEYDEFERVLSGGRRRSAGIMEEVFKAMDKDGDGR

Query:  LSHADLKSYMHLAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKILAVDNIF
        LSHADLKSYMH AGFSI+DEEV AMI+FGG DE++GVSY+GLLKILAVDN++
Subjt:  LSHADLKSYMHLAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKILAVDNIF

SwissProt top hitse value%identityAlignment
A8CEP3 Calmodulin7.0e-1131.62Show/hide
Query:  ADFRQAFEVLDADRDGKISRDDLRNFYSA---DADEDAIGSMILVADLNRNGFVEYDEFERVLSGGRRRSAGIME--EVFKAMDKDGDGRLSHADLKSYM
        A+F++AF + D D DG I+  +L     +   +  E  +  MI   D + NG +++ EF  +++   + +    E  E FK  DKDG+G +S A+L+  M
Subjt:  ADFRQAFEVLDADRDGKISRDDLRNFYSA---DADEDAIGSMILVADLNRNGFVEYDEFERVLSGGRRRSAGIME--EVFKAMDKDGDGRLSHADLKSYM

Query:  HLAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKIL
           G  +TDEEV  MIR    D    ++Y+  +K++
Subjt:  HLAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKIL

O96102 Calmodulin7.0e-1132.37Show/hide
Query:  ADFRQAFEVLDADRDGKISRDDLRNFYSA---DADEDAIGSMILVADLNRNGFVEYDEFERVLSGGRRRSAGI-----MEEVFKAMDKDGDGRLSHADLK
        A+F++AF + D D DG I+  +L     +   +  E  +  MI   D + NG +++ EF  +++   R+ A       + E FK  DKDG+G +S A+L+
Subjt:  ADFRQAFEVLDADRDGKISRDDLRNFYSA---DADEDAIGSMILVADLNRNGFVEYDEFERVLSGGRRRSAGI-----MEEVFKAMDKDGDGRLSHADLK

Query:  SYMHLAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKIL
          M   G  ++DEEV  MIR    D    V+YD  +K++
Subjt:  SYMHLAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKIL

P02599 Calmodulin1.8e-1132.86Show/hide
Query:  ADFRQAFEVLDADRDGKISRDDLRNFYSA---DADEDAIGSMILVADLNRNGFVEYDEFERVLSGGRRRSAGIME--EVFKAMDKDGDGRLSHADLKSYM
        A+F++AF + D D DG I+  +L     +   +  E  +  MI   D + NG +++ EF  +++   + +    E  E FK  DKDG+G +S A+L+  M
Subjt:  ADFRQAFEVLDADRDGKISRDDLRNFYSA---DADEDAIGSMILVADLNRNGFVEYDEFERVLSGGRRRSAGIME--EVFKAMDKDGDGRLSHADLKSYM

Query:  HLAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKILAVDN
           G  +T+EEV  MIR    D    V+YD  +K++ V N
Subjt:  HLAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKILAVDN

Q8X187 Calmodulin7.0e-1131.62Show/hide
Query:  ADFRQAFEVLDADRDGKISRDDLRNFYSA---DADEDAIGSMILVADLNRNGFVEYDEFERVLSGGRR--RSAGIMEEVFKAMDKDGDGRLSHADLKSYM
        ++F++AF + D D DG I+  +L     +   +  E  +  MI   D + NG +++ EF  +++   R   S   ++E FK  DKDG+G +S A+L+  M
Subjt:  ADFRQAFEVLDADRDGKISRDDLRNFYSA---DADEDAIGSMILVADLNRNGFVEYDEFERVLSGGRR--RSAGIMEEVFKAMDKDGDGRLSHADLKSYM

Query:  HLAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKIL
           G  +TD EV  MIR    D    ++YD  +K++
Subjt:  HLAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKIL

Q9FDX6 Calcium-binding protein CP11.3e-3855.06Show/hide
Query:  MCPSG------TAAASPADFRQAFEVLDADRDGKISRDDLRNFYSA-----DADEDAIGSMILVADLNRNGFVEYDEFERVLS------GGRRRSAGIME
        MCPSG      T  A+P +FR AFE++D D DGKIS DDLR FY+      + DE  IG+MI VAD N++GFVE+DEFE+VL        G     G+M+
Subjt:  MCPSG------TAAASPADFRQAFEVLDADRDGKISRDDLRNFYSA-----DADEDAIGSMILVADLNRNGFVEYDEFERVLS------GGRRRSAGIME

Query:  EVFKAMDKDGDGRLSHADLKSYMHLAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKI
        +VFK MDKDGDGRLS+ DLKSYM  AG ++TD+E+ +MIR  G D  +GVS+DGLLKI
Subjt:  EVFKAMDKDGDGRLSHADLKSYMHLAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKI

Arabidopsis top hitse value%identityAlignment
AT1G66410.1 calmodulin 47.2e-1130.15Show/hide
Query:  ADFRQAFEVLDADRDGKISRDDLRNFYSA---DADEDAIGSMILVADLNRNGFVEYDEFERVLSGGRR--RSAGIMEEVFKAMDKDGDGRLSHADLKSYM
        ++F++AF + D D DG I+  +L     +   +  E  +  MI   D + NG +++ EF  +++   +   S   ++E F+  DKD +G +S A+L+  M
Subjt:  ADFRQAFEVLDADRDGKISRDDLRNFYSA---DADEDAIGSMILVADLNRNGFVEYDEFERVLSGGRR--RSAGIMEEVFKAMDKDGDGRLSHADLKSYM

Query:  HLAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKIL
           G  +TDEEV  MIR    D    ++Y+  +KI+
Subjt:  HLAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKIL

AT3G22930.1 calmodulin-like 111.1e-1129.71Show/hide
Query:  DFRQAFEVLDADRDGKISRDDLRNFYSA---DADEDAIGSMILVADLNRNGFVEYDEFERVLSGGRRRSAG--IMEEVFKAMDKDGDGRLSHADLKSYMH
        +F++AF + D D DG I+ D+L     +   +  E  +  MI   D + NG +E+ EF  +++   + +     ++E FK  DKD +G +S ++L+  M 
Subjt:  DFRQAFEVLDADRDGKISRDDLRNFYSA---DADEDAIGSMILVADLNRNGFVEYDEFERVLSGGRRRSAG--IMEEVFKAMDKDGDGRLSHADLKSYMH

Query:  LAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKILAVD
          G  +TDEEV  MI+    D    V+YD  ++++ ++
Subjt:  LAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKILAVD

AT3G43810.1 calmodulin 71.2e-1029.41Show/hide
Query:  ADFRQAFEVLDADRDGKISRDDLRNFYSA---DADEDAIGSMILVADLNRNGFVEYDEFERVLSGGRR--RSAGIMEEVFKAMDKDGDGRLSHADLKSYM
        ++F++AF + D D DG I+  +L     +   +  E  +  MI   D + NG +++ EF  +++   +   S   ++E F+  DKD +G +S A+L+  M
Subjt:  ADFRQAFEVLDADRDGKISRDDLRNFYSA---DADEDAIGSMILVADLNRNGFVEYDEFERVLSGGRR--RSAGIMEEVFKAMDKDGDGRLSHADLKSYM

Query:  HLAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKIL
           G  +TDEEV  MIR    D    ++Y+  +K++
Subjt:  HLAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKIL

AT5G37780.1 calmodulin 17.2e-1130.15Show/hide
Query:  ADFRQAFEVLDADRDGKISRDDLRNFYSA---DADEDAIGSMILVADLNRNGFVEYDEFERVLSGGRR--RSAGIMEEVFKAMDKDGDGRLSHADLKSYM
        ++F++AF + D D DG I+  +L     +   +  E  +  MI   D + NG +++ EF  +++   +   S   ++E F+  DKD +G +S A+L+  M
Subjt:  ADFRQAFEVLDADRDGKISRDDLRNFYSA---DADEDAIGSMILVADLNRNGFVEYDEFERVLSGGRR--RSAGIMEEVFKAMDKDGDGRLSHADLKSYM

Query:  HLAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKIL
           G  +TDEEV  MIR    D    ++Y+  +KI+
Subjt:  HLAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKIL

AT5G49480.1 Ca2+-binding protein 19.6e-4055.06Show/hide
Query:  MCPSG------TAAASPADFRQAFEVLDADRDGKISRDDLRNFYSA-----DADEDAIGSMILVADLNRNGFVEYDEFERVLS------GGRRRSAGIME
        MCPSG      T  A+P +FR AFE++D D DGKIS DDLR FY+      + DE  IG+MI VAD N++GFVE+DEFE+VL        G     G+M+
Subjt:  MCPSG------TAAASPADFRQAFEVLDADRDGKISRDDLRNFYSA-----DADEDAIGSMILVADLNRNGFVEYDEFERVLS------GGRRRSAGIME

Query:  EVFKAMDKDGDGRLSHADLKSYMHLAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKI
        +VFK MDKDGDGRLS+ DLKSYM  AG ++TD+E+ +MIR  G D  +GVS+DGLLKI
Subjt:  EVFKAMDKDGDGRLSHADLKSYMHLAGFSITDEEVAAMIRFGGADEAEGVSYDGLLKI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTCCCTCCGGTACAGCCGCCGCCTCCCCCGCCGATTTTCGCCAGGCATTCGAGGTGCTCGACGCCGACCGCGACGGAAAGATCAGCCGCGACGATCTTCGAAATTT
CTACAGCGCCGACGCCGATGAAGATGCGATTGGCTCCATGATTTTGGTCGCCGATTTGAATCGGAACGGTTTTGTTGAGTACGACGAGTTTGAACGCGTATTGTCCGGTG
GACGGAGGAGATCGGCTGGTATAATGGAGGAGGTGTTCAAGGCGATGGACAAGGACGGAGACGGACGGTTGAGCCACGCTGACCTGAAGAGTTACATGCATTTGGCCGGA
TTTTCGATCACCGATGAGGAGGTTGCGGCGATGATCAGATTTGGCGGTGCGGATGAAGCGGAGGGCGTTAGTTATGATGGATTGCTGAAGATCTTGGCCGTTGATAATAT
ATTC
mRNA sequenceShow/hide mRNA sequence
ATGTGTCCCTCCGGTACAGCCGCCGCCTCCCCCGCCGATTTTCGCCAGGCATTCGAGGTGCTCGACGCCGACCGCGACGGAAAGATCAGCCGCGACGATCTTCGAAATTT
CTACAGCGCCGACGCCGATGAAGATGCGATTGGCTCCATGATTTTGGTCGCCGATTTGAATCGGAACGGTTTTGTTGAGTACGACGAGTTTGAACGCGTATTGTCCGGTG
GACGGAGGAGATCGGCTGGTATAATGGAGGAGGTGTTCAAGGCGATGGACAAGGACGGAGACGGACGGTTGAGCCACGCTGACCTGAAGAGTTACATGCATTTGGCCGGA
TTTTCGATCACCGATGAGGAGGTTGCGGCGATGATCAGATTTGGCGGTGCGGATGAAGCGGAGGGCGTTAGTTATGATGGATTGCTGAAGATCTTGGCCGTTGATAATAT
ATTC
Protein sequenceShow/hide protein sequence
MCPSGTAAASPADFRQAFEVLDADRDGKISRDDLRNFYSADADEDAIGSMILVADLNRNGFVEYDEFERVLSGGRRRSAGIMEEVFKAMDKDGDGRLSHADLKSYMHLAG
FSITDEEVAAMIRFGGADEAEGVSYDGLLKILAVDNIF