CuGenDBv2

Gene ID	MS008269
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ARID domain-containing protein
Genome location	scaffold4:56185..57135
RNA-Seq Expression	MS008269
Synteny	MS008269
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004142611.2 transcription initiation factor IIE subunit alpha [Cucumis sativus]

2.0e-108

70.64

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Query:  MKLGRD-AKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSAASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSC
        MKL R+ +K I S+DLLVCFPSRS+L LMP PLCSPARG DS+K R  +R +HRRRK  SA SP++WAK KTMGSEISEPSSPKVTCAGQIKIRPK  + 
Subjt:  MKLGRD-AKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSAASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSC

Query:  KSWQSVMEEIERIHNRRKLRRRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEEGKSQENQVGVEGNESSRTAFSKWF
        KSWQSVMEEIERIHNRRKLRRRR NW+ES GFKKDIMQFLTCLR +RFDFRCF+AFPE DFTTEEE+EEEEEEEEE   ++NQVG+E NESSRTAFSKWF
Subjt:  KSWQSVMEEIERIHNRRKLRRRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEEGKSQENQVGVEGNESSRTAFSKWF

Query:  MVLQESGASNGICRESNG----------PPLAPPKNALLLMRCRSAPAKSWQEEEEEEEEEEEEEEEAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGP
        MVLQE+G SN + R+SN             +APP+NALLLMRC+SAPA+ W EEE EEE++E+E+    E+++++VKVKKSLKWLMEEENRER+VMEMG 
Subjt:  MVLQESGASNGICRESNG----------PPLAPPKNALLLMRCRSAPAKSWQEEEEEEEEEEEEEEEAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGP

Query:  DFCRMSSEIAKETWVGRDLFSRSRSWK
        DFCRM S+ AKE       F+RS+SWK
Subjt:  DFCRMSSEIAKETWVGRDLFSRSRSWK

XP_008444111.1 PREDICTED: uncharacterized protein LOC103487551 [Cucumis melo]

1.1e-106

70.86

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Query:  MKLGRD-AKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSAASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSC
        MKL R+ +K I SADLLVCFPSRS+L LMP PLCSPARG DS+K R  HR  HRRRK  SA SP++WAK KTMGSEISEPSSPKVTCAGQIKIRPK  + 
Subjt:  MKLGRD-AKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSAASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSC

Query:  KSWQSVMEEIERIHNRRKLRRRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEEGKSQENQVGVEGNESSRTAFSKWF
        KSWQSVMEEIERIHNRRKLRRRR  WVES GFKKDIMQFLTCLR IRFDFRCF+AFPE DFTTEEE+EEEEEEE+E    +NQVG+E NESSRTAFSKWF
Subjt:  KSWQSVMEEIERIHNRRKLRRRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEEGKSQENQVGVEGNESSRTAFSKWF

Query:  MVLQESGA------SNGICR---ESNGPPLAPPKNALLLMRCRSAPAKSWQEEEEEEEEEEEEEEEAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPD
        MVLQE+G+      S  +C    ES    +APP NALLLMRCRSAPA+ W EEE EE ++E+E          +VKVKKSLKWLMEEENRERLV+EMG D
Subjt:  MVLQESGA------SNGICR---ESNGPPLAPPKNALLLMRCRSAPAKSWQEEEEEEEEEEEEEEEAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPD

Query:  FCRMSSEIAKETWVGRDLFSRSRSWK
        FCRM+S+ AKE       F+RS+SWK
Subjt:  FCRMSSEIAKETWVGRDLFSRSRSWK

XP_022147766.1 uncharacterized protein LOC111016595 [Momordica charantia]

7.8e-166

98.14

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Query:  MKLGRDAKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSAASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCK
        MKLGRDAKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSAASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCK
Subjt:  MKLGRDAKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSAASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCK

Query:  SWQSVMEEIERIHNRRKLRRRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEEGKSQENQVGVEGNESSRTAFSKWFM
        SWQSVMEEIERIHNRRKLRRRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEED EEEEEEEEGKSQENQVGVEGNESSRTAFSKWFM
Subjt:  SWQSVMEEIERIHNRRKLRRRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEEGKSQENQVGVEGNESSRTAFSKWFM

Query:  VLQESGASNGICRESNGPPLAPPKNALLLMRCRSAPAKSWQEEEEEEEEEEEEEEE-----AAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPDFCRMS
        VLQESGASNGICRESNGPPLAPPKNALLLMRCRSAPAKSWQEEEEEEEEEEEEEEE     AAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPDFCRMS
Subjt:  VLQESGASNGICRESNGPPLAPPKNALLLMRCRSAPAKSWQEEEEEEEEEEEEEEE-----AAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPDFCRMS

Query:  SEIAKETWVGRDLFSRSRSWKA
        SEIAKETWVGRDLFSRSRSWKA
Subjt:  SEIAKETWVGRDLFSRSRSWKA

XP_023523446.1 uncharacterized protein LOC111787660 [Cucurbita pepo subsp. pepo]

1.9e-95

66.35

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Query:  MKLGRDAKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHR-HHHRRRKSTSAASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSC
        MKLGR+AK I S DLLVCFPSRS L LMP PLCSP RG DS+KLRRS R +HHRRRK  SA SP++WAK KTMGSE+SEPSSPKVTCAGQ+K+R K  + 
Subjt:  MKLGRDAKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHR-HHHRRRKSTSAASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSC

Query:  KSWQSVMEEIERIHNRRKLRRRRS-NWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEEGKSQENQVGVEGNESSRTAFSKW
        + WQSVMEEIERIHNRRKLRRRR  NWVESLGFKKDIMQ LTCLR++RFDFRCF+AFPEADFTTEE+++EEEEEEEE + +E       +ESSR AFSKW
Subjt:  KSWQSVMEEIERIHNRRKLRRRRS-NWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEEGKSQENQVGVEGNESSRTAFSKW

Query:  FMVLQESGASNGICRESNGPPLAPPKNALLLMRCRSAPAKSWQEEEEEEEEEEEEEEEAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPDFCRMSSEI
        FMVLQE+   NG C   +  P+APPKNALLLMRCRSAPAKSW E                   EK  K KKSLKWLMEEENRERL ME G +  R S   
Subjt:  FMVLQESGASNGICRESNGPPLAPPKNALLLMRCRSAPAKSWQEEEEEEEEEEEEEEEAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPDFCRMSSEI

Query:  AKETWVGRDLFSRSRSWK
            W+     +RSRSWK
Subjt:  AKETWVGRDLFSRSRSWK

XP_038898663.1 transcription initiation factor IIE subunit alpha [Benincasa hispida]

7.1e-119

75.45

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Query:  MKLGRDAKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSAASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCK
        MKLGR+ K I SADLLVCFPSRS+L LMP PLCSPARG DS+K R SHRH+HRRRK  SA SP++WAK KTMGSEISEPSSPKVTCAGQIKIRPK  + K
Subjt:  MKLGRDAKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSAASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCK

Query:  SWQSVMEEIERIHNRRKLRRRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEEGKSQENQVGVEGNESSRTAFSKWFM
        SWQSVMEEIERIHNRRKLRRRR +WVESLGFKKDIMQFLTCLRNIRFDFRCF+AFP  DFTTEEE+EEEEEEEE  KSQ NQVGV+ NESSRTAFSKWFM
Subjt:  SWQSVMEEIERIHNRRKLRRRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEEGKSQENQVGVEGNESSRTAFSKWFM

Query:  VLQESGASNGICRESN----------GPPLAPPKNALLLMRCRSAPAKSWQEEEEEEEEEEEEEEEAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPD
        VLQE+G SN + RES              +APPKNALLLMRCRSAPAK W EEE EEEE+++++    +++++EVKVKKSLKWLMEEENRERLVME G D
Subjt:  VLQESGASNGICRESN----------GPPLAPPKNALLLMRCRSAPAKSWQEEEEEEEEEEEEEEEAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPD

Query:  FCRMSSEIAKETWV----GRDLFSRSRSWK
        FCRM+S+IAKETWV     RDLF+RS SWK
Subjt:  FCRMSSEIAKETWV----GRDLFSRSRSWK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L1Z4 Uncharacterized protein

9.4e-109

70.64

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Query:  MKLGRD-AKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSAASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSC
        MKL R+ +K I S+DLLVCFPSRS+L LMP PLCSPARG DS+K R  +R +HRRRK  SA SP++WAK KTMGSEISEPSSPKVTCAGQIKIRPK  + 
Subjt:  MKLGRD-AKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSAASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSC

Query:  KSWQSVMEEIERIHNRRKLRRRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEEGKSQENQVGVEGNESSRTAFSKWF
        KSWQSVMEEIERIHNRRKLRRRR NW+ES GFKKDIMQFLTCLR +RFDFRCF+AFPE DFTTEEE+EEEEEEEEE   ++NQVG+E NESSRTAFSKWF
Subjt:  KSWQSVMEEIERIHNRRKLRRRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEEGKSQENQVGVEGNESSRTAFSKWF

Query:  MVLQESGASNGICRESNG----------PPLAPPKNALLLMRCRSAPAKSWQEEEEEEEEEEEEEEEAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGP
        MVLQE+G SN + R+SN             +APP+NALLLMRC+SAPA+ W EEE EEE++E+E+    E+++++VKVKKSLKWLMEEENRER+VMEMG 
Subjt:  MVLQESGASNGICRESNG----------PPLAPPKNALLLMRCRSAPAKSWQEEEEEEEEEEEEEEEAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGP

Query:  DFCRMSSEIAKETWVGRDLFSRSRSWK
        DFCRM S+ AKE       F+RS+SWK
Subjt:  DFCRMSSEIAKETWVGRDLFSRSRSWK

A0A1S3B949 uncharacterized protein LOC103487551

5.2e-107

70.86

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Query:  MKLGRD-AKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSAASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSC
        MKL R+ +K I SADLLVCFPSRS+L LMP PLCSPARG DS+K R  HR  HRRRK  SA SP++WAK KTMGSEISEPSSPKVTCAGQIKIRPK  + 
Subjt:  MKLGRD-AKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSAASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSC

Query:  KSWQSVMEEIERIHNRRKLRRRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEEGKSQENQVGVEGNESSRTAFSKWF
        KSWQSVMEEIERIHNRRKLRRRR  WVES GFKKDIMQFLTCLR IRFDFRCF+AFPE DFTTEEE+EEEEEEE+E    +NQVG+E NESSRTAFSKWF
Subjt:  KSWQSVMEEIERIHNRRKLRRRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEEGKSQENQVGVEGNESSRTAFSKWF

Query:  MVLQESGA------SNGICR---ESNGPPLAPPKNALLLMRCRSAPAKSWQEEEEEEEEEEEEEEEAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPD
        MVLQE+G+      S  +C    ES    +APP NALLLMRCRSAPA+ W EEE EE ++E+E          +VKVKKSLKWLMEEENRERLV+EMG D
Subjt:  MVLQESGA------SNGICR---ESNGPPLAPPKNALLLMRCRSAPAKSWQEEEEEEEEEEEEEEEAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPD

Query:  FCRMSSEIAKETWVGRDLFSRSRSWK
        FCRM+S+ AKE       F+RS+SWK
Subjt:  FCRMSSEIAKETWVGRDLFSRSRSWK

A0A2I4DXY3 uncharacterized protein LOC108984494

3.5e-95

63.34

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Query:  GRDAKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHR---RRKST---SAASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTG
        GR+AKA  SADLLVCFPSR++LTLMPKP+CSPAR  + NK   SH HHH    ++ ST     ASPL+WAK K MGSEISEP+SPKVTCAGQIK+RPKT 
Subjt:  GRDAKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHR---RRKST---SAASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTG

Query:  SCKSWQSVMEEIERIHNRRKLRRRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEEGKSQENQVGVE---GNESSRTA
        SCKSWQSVMEEIERIHN RK  ++R +WVE+LG KKDIMQFLTCLR+IRFDFRCF +FPE+D TTE+ED    +EEE G+ Q+N +G E   GNE+SRTA
Subjt:  SCKSWQSVMEEIERIHNRRKLRRRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEEGKSQENQVGVE---GNESSRTA

Query:  FSKWFMVLQESGASNGICR------------ESNGPPLAPPKNALLLMRCRSAPAKSWQEEEEEEEEEEEEEEEAAEEDEKEVKVKKSLKWLMEEENRER
        FSKWFMVLQE+  +N +C+            ES     APP NALLLMRCRSAPAK W  E+E+EEEE EE+E+  E   KEV+  KSLK LMEEE R +
Subjt:  FSKWFMVLQESGASNGICR------------ESNGPPLAPPKNALLLMRCRSAPAKSWQEEEEEEEEEEEEEEEAAEEDEKEVKVKKSLKWLMEEENRER

Query:  ----LVMEMGPDFCRMSSEIAKETWVG---RDLFSRSRSWK
            +VM+   DF ++SS+IAKETWVG   RD FSRSRSWK
Subjt:  ----LVMEMGPDFCRMSSEIAKETWVG---RDLFSRSRSWK

A0A5D3D503 Transcription initiation factor IIE subunit alpha-like

5.2e-107

70.86

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Query:  MKLGRD-AKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSAASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSC
        MKL R+ +K I SADLLVCFPSRS+L LMP PLCSPARG DS+K R  HR  HRRRK  SA SP++WAK KTMGSEISEPSSPKVTCAGQIKIRPK  + 
Subjt:  MKLGRD-AKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSAASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSC

Query:  KSWQSVMEEIERIHNRRKLRRRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEEGKSQENQVGVEGNESSRTAFSKWF
        KSWQSVMEEIERIHNRRKLRRRR  WVES GFKKDIMQFLTCLR IRFDFRCF+AFPE DFTTEEE+EEEEEEE+E    +NQVG+E NESSRTAFSKWF
Subjt:  KSWQSVMEEIERIHNRRKLRRRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEEGKSQENQVGVEGNESSRTAFSKWF

Query:  MVLQESGA------SNGICR---ESNGPPLAPPKNALLLMRCRSAPAKSWQEEEEEEEEEEEEEEEAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPD
        MVLQE+G+      S  +C    ES    +APP NALLLMRCRSAPA+ W EEE EE ++E+E          +VKVKKSLKWLMEEENRERLV+EMG D
Subjt:  MVLQESGA------SNGICR---ESNGPPLAPPKNALLLMRCRSAPAKSWQEEEEEEEEEEEEEEEAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPD

Query:  FCRMSSEIAKETWVGRDLFSRSRSWK
        FCRM+S+ AKE       F+RS+SWK
Subjt:  FCRMSSEIAKETWVGRDLFSRSRSWK

A0A6J1D3C2 uncharacterized protein LOC111016595

3.8e-166

98.14

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Query:  MKLGRDAKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSAASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCK
        MKLGRDAKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSAASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCK
Subjt:  MKLGRDAKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSAASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCK

Query:  SWQSVMEEIERIHNRRKLRRRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEEGKSQENQVGVEGNESSRTAFSKWFM
        SWQSVMEEIERIHNRRKLRRRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEED EEEEEEEEGKSQENQVGVEGNESSRTAFSKWFM
Subjt:  SWQSVMEEIERIHNRRKLRRRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEEGKSQENQVGVEGNESSRTAFSKWFM

Query:  VLQESGASNGICRESNGPPLAPPKNALLLMRCRSAPAKSWQEEEEEEEEEEEEEEE-----AAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPDFCRMS
        VLQESGASNGICRESNGPPLAPPKNALLLMRCRSAPAKSWQEEEEEEEEEEEEEEE     AAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPDFCRMS
Subjt:  VLQESGASNGICRESNGPPLAPPKNALLLMRCRSAPAKSWQEEEEEEEEEEEEEEE-----AAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPDFCRMS

Query:  SEIAKETWVGRDLFSRSRSWKA
        SEIAKETWVGRDLFSRSRSWKA
Subjt:  SEIAKETWVGRDLFSRSRSWKA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G22230.1 unknown protein

6.8e-51

45.05

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Query:  MKLGRDAKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSAASPLIWAKPKTMGSE-ISEPSSPKVTCAGQIKIR--PKTG
        +K G    + +SADL+VCFPSR++L+L  K + SP+   +    RR +  HHRR  S  ++S     + +  G E + EP+SPKVTCAGQIK+R   + G
Subjt:  MKLGRDAKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSAASPLIWAKPKTMGSE-ISEPSSPKVTCAGQIKIR--PKTG

Query:  SCKSWQSVMEEIERIHNRRKLRRRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEEGKSQENQVGVEGNESSRTAFSK
          K+WQS+M EIE+IH       R  +  +  G K+D+M FLTCLR+  FDFRCF AFP  D  +++E+E+EEEEEE+ +  E       +ESS T FSK
Subjt:  SCKSWQSVMEEIERIHNRRKLRRRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEEGKSQENQVGVEGNESSRTAFSK

Query:  WFMVLQESGASNGICRE------SNGPPLAPPKNALLLMRCRSAPAKSWQEEEEEEEEE-EEEEEEAAEEDEKE---VKVKKSLKWLMEEENRERL-VME
        W MVL E   +N  C +      S+     PP NALLLMRCRSAP K+W EE++EE EE +   +++ EE+E+E   V  KK L+ LMEEE +  L VM 
Subjt:  WFMVLQESGASNGICRE------SNGPPLAPPKNALLLMRCRSAPAKSWQEEEEEEEEE-EEEEEEAAEEDEKE---VKVKKSLKWLMEEENRERL-VME

Query:  MGPDFCRMSSEIAKETWVG---RDLFSRSRSWK
           ++ ++S++IAKETWV    +D   RSRSWK
Subjt:  MGPDFCRMSSEIAKETWVG---RDLFSRSRSWK

AT1G78110.1 unknown protein

6.1e-68

51.18

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Query:  HSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSA-------ASPLIWAK---PKTM-GSEISEPSSPKVTCAGQIKIRPKT--G
        +SADLLVCFPSR++L L PKP+CSP+R  DS+  RR    HHRR+ S  +        SP++WAK    K M G EI+EP+SPKVTCAGQIK+RP    G
Subjt:  HSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSA-------ASPLIWAK---PKTM-GSEISEPSSPKVTCAGQIKIRPKT--G

Query:  SCKSWQSVMEEIERIHNRRKLRRRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEEGKSQENQVGVEGNESSRTAFSK
          K+WQSVMEEIERIH+ R   +         G KKD+M FLTCLRNI+FDFRCF  F  AD T+++++EE+++++EE    E  V  E  E+S+T FSK
Subjt:  SCKSWQSVMEEIERIHNRRKLRRRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEEGKSQENQVGVEGNESSRTAFSK

Query:  WFMVLQE------SGASNGICRE------SNGPPLAPPKNALLLMRCRSAPAKSWQEEE-----EEEEEEEEEEEEAAEEDEKEVKV-KKSLKWLMEEEN
        WFMVLQE         +N  C E      +   P  PP NALLLMRCRSAPAKSW EE      E+E+ EE++EE+  E+ E  +K  KK L+ LMEEE 
Subjt:  WFMVLQE------SGASNGICRE------SNGPPLAPPKNALLLMRCRSAPAKSWQEEE-----EEEEEEEEEEEEAAEEDEKEVKV-KKSLKWLMEEEN

Query:  RERLVMEMGPDFCRMSSEIAKETWVG---RDLFSRSRSWK
         E ++M    +F R+SS+IAKETWV    +D  SRSRSWK
Subjt:  RERLVMEMGPDFCRMSSEIAKETWVG---RDLFSRSRSWK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAAATTGGGCAGAGATGCTAAAGCGATCCATTCGGCGGATTTGTTGGTGTGTTTTCCTTCTCGATCGAATCTGACTTTAATGCCGAAGCCGCTTTGTAGTCCAGCGAG
GGGATTGGATTCCAACAAGCTCCGCCGCAGCCACCGCCACCACCATCGCCGGAGGAAATCGACCTCCGCCGCCAGTCCGCTGATATGGGCGAAACCCAAGACAATGGGGT
CCGAGATATCGGAGCCGTCGTCCCCGAAAGTGACGTGTGCTGGGCAGATAAAGATCAGGCCCAAGACCGGCTCCTGCAAGAGCTGGCAATCGGTGATGGAAGAGATTGAG
AGAATTCACAACAGGAGGAAATTACGGAGGAGGAGGTCTAATTGGGTCGAGTCTTTGGGGTTCAAGAAAGATATAATGCAATTCTTGACGTGTTTACGGAACATCCGGTT
TGATTTTCGGTGTTTCAAAGCTTTCCCAGAAGCAGATTTCACTACGGAAGAAGAAGATGAAGAAGAGGAGGAGGAAGAAGAGGAGGGAAAATCTCAGGAAAATCAAGTGG
GAGTTGAGGGAAATGAAAGCTCCAGAACTGCATTTTCTAAATGGTTTATGGTTTTACAGGAAAGTGGGGCTAGTAATGGGATTTGCAGAGAAAGCAATGGCCCGCCATTG
GCACCTCCCAAGAATGCTCTTTTGCTAATGCGATGCAGGTCTGCTCCAGCAAAGAGTTGGCAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGC
AGCAGAAGAAGATGAAAAGGAAGTGAAGGTGAAGAAGAGCTTGAAATGGCTAATGGAGGAAGAGAACAGAGAGAGATTGGTTATGGAAATGGGGCCTGATTTCTGCAGAA
TGTCATCGGAGATTGCAAAGGAGACATGGGTTGGCAGGGATTTGTTTTCAAGGAGTCGGAGTTGGAAGGCT

mRNA sequence

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Protein sequence

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MKLGRDAKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSAASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIE
RIHNRRKLRRRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEEGKSQENQVGVEGNESSRTAFSKWFMVLQESGASNGICRESNGPPL
APPKNALLLMRCRSAPAKSWQEEEEEEEEEEEEEEEAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPDFCRMSSEIAKETWVGRDLFSRSRSWKA

MS008269 (gene) of Bitter gourd (TR) v1 genome