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MS008275 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008275
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionFLZ-type domain-containing protein
Genome locationscaffold4:103518..104054
RNA-Seq ExpressionMS008275
SyntenyMS008275
Gene Ontology termsNA
InterPro domainsIPR007650 - Zf-FLZ domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150522.1 FCS-Like Zinc finger 6 [Cucumis sativus]9.1e-5376.97Show/hide
Query:  MSLGKRSRPPMKKTASMTEITFDLGGSAAPAEQLPP----PPLTNMIG--SMVSPRNHRRHSVDLQDSANFLAACSLCTRPLVPGRDIYMYRGDRGFCSD
        MSLGKRSR P++KT SMTEITFDLGG+ + AEQ PP    P  T + G   MVSPRN RRHSVDLQ++ANFL ACSLC+RPLVPGRDIYMYRGDRGFCSD
Subjt:  MSLGKRSRPPMKKTASMTEITFDLGGSAAPAEQLPP----PPLTNMIG--SMVSPRNHRRHSVDLQDSANFLAACSLCTRPLVPGRDIYMYRGDRGFCSD

Query:  ECRQKQMKQDERMEKCSIASKKAAAAAAAAAGSTKAGVPPQISGKGETVAAS
        ECRQKQMKQDERMEKCS+A+KKAAA   A   ST AGVPPQISGKGETVAAS
Subjt:  ECRQKQMKQDERMEKCSIASKKAAAAAAAAAGSTKAGVPPQISGKGETVAAS

XP_008444103.1 PREDICTED: uncharacterized protein LOC103487542 [Cucumis melo]7.0e-5376.97Show/hide
Query:  MSLGKRSRPPMKKTASMTEITFDLGGSAAPAEQLPP----PPLTNMIG--SMVSPRNHRRHSVDLQDSANFLAACSLCTRPLVPGRDIYMYRGDRGFCSD
        MSLGKRSR P++KT SMTEITFDLGG+ + AEQ PP    P  T + G   M+SPRN RRHSVDLQ++ANFL ACSLC+RPLVPGRDIYMYRGDRGFCSD
Subjt:  MSLGKRSRPPMKKTASMTEITFDLGGSAAPAEQLPP----PPLTNMIG--SMVSPRNHRRHSVDLQDSANFLAACSLCTRPLVPGRDIYMYRGDRGFCSD

Query:  ECRQKQMKQDERMEKCSIASKKAAAAAAAAAGSTKAGVPPQISGKGETVAAS
        ECRQKQMKQDERMEKCS+A+KKAAA A A   ST AGVPPQISGKGETVAAS
Subjt:  ECRQKQMKQDERMEKCSIASKKAAAAAAAAAGSTKAGVPPQISGKGETVAAS

XP_022137587.1 uncharacterized protein LOC111008997 [Momordica charantia]4.4e-7198.63Show/hide
Query:  MSLGKRSRPPMKKTASMTEITFDLGGSAAPAEQLPPPPLTNMIGSMVSPRNHRRHSVDLQDSANFLAACSLCTRPLVPGRDIYMYRGDRGFCSDECRQKQ
        MSLGKRSRPPMKKTASMTEITFDLGGSAAPAEQLPPPPLTNMIGSMVSPRNHRRHSVDLQDSANFLAACSLCTRPLVPGRDIYMYRGDRGFCSDECRQKQ
Subjt:  MSLGKRSRPPMKKTASMTEITFDLGGSAAPAEQLPPPPLTNMIGSMVSPRNHRRHSVDLQDSANFLAACSLCTRPLVPGRDIYMYRGDRGFCSDECRQKQ

Query:  MKQDERMEKCSIASKKAAAAAAAAAGSTKAGVPPQISGKGETVAAS
        MKQDERMEKCSIASKK  AAAAAAAGSTKAGVPPQISGKGETVAAS
Subjt:  MKQDERMEKCSIASKKAAAAAAAAAGSTKAGVPPQISGKGETVAAS

XP_022975921.1 uncharacterized protein LOC111476480 [Cucurbita maxima]3.5e-5278.29Show/hide
Query:  MSLGKRSRPPMKKTASMTEITFDLGGSAAPAEQLPPPPL--TNMIGSMVSPRNHRRHSVDLQDSANFLAACSLCTRPLVPGRDIYMYRGDRGFCSDECRQ
        MSLGKRSR PMK+T SMTEITFDLG SA   +QLPPP L  + +   MVSPRN+RRHSVDLQD+ANFL ACSLCTRPLVPGRDIYMYRGDRGFCSDECRQ
Subjt:  MSLGKRSRPPMKKTASMTEITFDLGGSAAPAEQLPPPPL--TNMIGSMVSPRNHRRHSVDLQDSANFLAACSLCTRPLVPGRDIYMYRGDRGFCSDECRQ

Query:  KQMKQDERMEKCSIASKKAAAAAAAAAG----STKAGVPPQISGKGETVAAS
        KQMKQDER+EKCS+ASKKAAAAAAAAA     S    V  QISGKGETVAAS
Subjt:  KQMKQDERMEKCSIASKKAAAAAAAAAG----STKAGVPPQISGKGETVAAS

XP_038898979.1 FCS-Like Zinc finger 6-like [Benincasa hispida]4.1e-5377.22Show/hide
Query:  MSLGKRSRPPMKKTASMTEITFDLGGSAAPAEQLPP----PPLTNMIG--SMVSPRNHRRHSVDLQDSANFLAACSLCTRPLVPGRDIYMYRGDRGFCSD
        MSLGKRSR PM+KT SMTEITFDLGGSA   EQ PP    P  T   G   MVSPRN+RRHS+DLQ++ NFL ACSLCTRPLVPGRDIYMYRGD+GFCSD
Subjt:  MSLGKRSRPPMKKTASMTEITFDLGGSAAPAEQLPP----PPLTNMIG--SMVSPRNHRRHSVDLQDSANFLAACSLCTRPLVPGRDIYMYRGDRGFCSD

Query:  ECRQKQMKQDERMEKCSIASKKAAAAAAAAAG------STKAGVPPQISGKGETVAAS
        ECRQKQMKQDERMEKCS+ASKKAAAAAAAAA       ST A VPPQISGKGETVAAS
Subjt:  ECRQKQMKQDERMEKCSIASKKAAAAAAAAAG------STKAGVPPQISGKGETVAAS

TrEMBL top hitse value%identityAlignment
A0A0A0KYN7 FLZ-type domain-containing protein4.4e-5376.97Show/hide
Query:  MSLGKRSRPPMKKTASMTEITFDLGGSAAPAEQLPP----PPLTNMIG--SMVSPRNHRRHSVDLQDSANFLAACSLCTRPLVPGRDIYMYRGDRGFCSD
        MSLGKRSR P++KT SMTEITFDLGG+ + AEQ PP    P  T + G   MVSPRN RRHSVDLQ++ANFL ACSLC+RPLVPGRDIYMYRGDRGFCSD
Subjt:  MSLGKRSRPPMKKTASMTEITFDLGGSAAPAEQLPP----PPLTNMIG--SMVSPRNHRRHSVDLQDSANFLAACSLCTRPLVPGRDIYMYRGDRGFCSD

Query:  ECRQKQMKQDERMEKCSIASKKAAAAAAAAAGSTKAGVPPQISGKGETVAAS
        ECRQKQMKQDERMEKCS+A+KKAAA   A   ST AGVPPQISGKGETVAAS
Subjt:  ECRQKQMKQDERMEKCSIASKKAAAAAAAAAGSTKAGVPPQISGKGETVAAS

A0A1S3B9M7 uncharacterized protein LOC1034875423.4e-5376.97Show/hide
Query:  MSLGKRSRPPMKKTASMTEITFDLGGSAAPAEQLPP----PPLTNMIG--SMVSPRNHRRHSVDLQDSANFLAACSLCTRPLVPGRDIYMYRGDRGFCSD
        MSLGKRSR P++KT SMTEITFDLGG+ + AEQ PP    P  T + G   M+SPRN RRHSVDLQ++ANFL ACSLC+RPLVPGRDIYMYRGDRGFCSD
Subjt:  MSLGKRSRPPMKKTASMTEITFDLGGSAAPAEQLPP----PPLTNMIG--SMVSPRNHRRHSVDLQDSANFLAACSLCTRPLVPGRDIYMYRGDRGFCSD

Query:  ECRQKQMKQDERMEKCSIASKKAAAAAAAAAGSTKAGVPPQISGKGETVAAS
        ECRQKQMKQDERMEKCS+A+KKAAA A A   ST AGVPPQISGKGETVAAS
Subjt:  ECRQKQMKQDERMEKCSIASKKAAAAAAAAAGSTKAGVPPQISGKGETVAAS

A0A6J1C8P0 uncharacterized protein LOC1110089972.1e-7198.63Show/hide
Query:  MSLGKRSRPPMKKTASMTEITFDLGGSAAPAEQLPPPPLTNMIGSMVSPRNHRRHSVDLQDSANFLAACSLCTRPLVPGRDIYMYRGDRGFCSDECRQKQ
        MSLGKRSRPPMKKTASMTEITFDLGGSAAPAEQLPPPPLTNMIGSMVSPRNHRRHSVDLQDSANFLAACSLCTRPLVPGRDIYMYRGDRGFCSDECRQKQ
Subjt:  MSLGKRSRPPMKKTASMTEITFDLGGSAAPAEQLPPPPLTNMIGSMVSPRNHRRHSVDLQDSANFLAACSLCTRPLVPGRDIYMYRGDRGFCSDECRQKQ

Query:  MKQDERMEKCSIASKKAAAAAAAAAGSTKAGVPPQISGKGETVAAS
        MKQDERMEKCSIASKK  AAAAAAAGSTKAGVPPQISGKGETVAAS
Subjt:  MKQDERMEKCSIASKKAAAAAAAAAGSTKAGVPPQISGKGETVAAS

A0A6J1FAL0 uncharacterized protein LOC1114435797.8e-5077.85Show/hide
Query:  MSLGKRSRPPMKKTASMTEITFDLGGSAAPAEQLPPPPL--TNMIGSMVSPRNHRRHSVD-LQDSANFLAACSLCTRPLVPGRDIYMYRGDRGFCSDECR
        MSLGKRSR PMK+T SMTEITFDLG SA   +QLPPP L  +     MVSPRN+RRHSVD LQD+ANFL ACSLCTRPLVPGRDIYMYRGDRGFCSDECR
Subjt:  MSLGKRSRPPMKKTASMTEITFDLGGSAAPAEQLPPPPL--TNMIGSMVSPRNHRRHSVD-LQDSANFLAACSLCTRPLVPGRDIYMYRGDRGFCSDECR

Query:  QKQMKQDERMEKCSIASKKAAAAAAAAAGSTKAGVPPQISGKGETVAAS
        QKQMKQDER+EKCS+ASKKAAAAAA    S    V  QISGKGETVAAS
Subjt:  QKQMKQDERMEKCSIASKKAAAAAAAAAGSTKAGVPPQISGKGETVAAS

A0A6J1IFI1 uncharacterized protein LOC1114764801.7e-5278.29Show/hide
Query:  MSLGKRSRPPMKKTASMTEITFDLGGSAAPAEQLPPPPL--TNMIGSMVSPRNHRRHSVDLQDSANFLAACSLCTRPLVPGRDIYMYRGDRGFCSDECRQ
        MSLGKRSR PMK+T SMTEITFDLG SA   +QLPPP L  + +   MVSPRN+RRHSVDLQD+ANFL ACSLCTRPLVPGRDIYMYRGDRGFCSDECRQ
Subjt:  MSLGKRSRPPMKKTASMTEITFDLGGSAAPAEQLPPPPL--TNMIGSMVSPRNHRRHSVDLQDSANFLAACSLCTRPLVPGRDIYMYRGDRGFCSDECRQ

Query:  KQMKQDERMEKCSIASKKAAAAAAAAAG----STKAGVPPQISGKGETVAAS
        KQMKQDER+EKCS+ASKKAAAAAAAAA     S    V  QISGKGETVAAS
Subjt:  KQMKQDERMEKCSIASKKAAAAAAAAAG----STKAGVPPQISGKGETVAAS

SwissProt top hitse value%identityAlignment
F4JW68 FCS-Like Zinc finger 75.4e-1640.71Show/hide
Query:  MSLGKRSRPPMKKTASMTEITFDLGGSAAPAEQLPPPPLT-----NMIGSMVSPRNHRRHSVDL---QDSANFLAACSLCTRPLVPGRDIYMYRGDRGFC
        M LG R RP M++TAS+T IT ++ G     +             N     +SP NH+R+          ++FL  C  C R L PGRDIYMY+GD  FC
Subjt:  MSLGKRSRPPMKKTASMTEITFDLGGSAAPAEQLPPPPLT-----NMIGSMVSPRNHRRHSVDL---QDSANFLAACSLCTRPLVPGRDIYMYRGDRGFC

Query:  SDECRQKQMKQDE
        S ECR++QM+ DE
Subjt:  SDECRQKQMKQDE

Q8VY80 FCS-Like Zinc finger 53.9e-2250.39Show/hide
Query:  MSLGKRSRPPMKKTASMTEITFDLGGSAAPAEQLPPPPLTNMIG-----------------SMVSPR-NHRRHSVDLQDSANFLAACSLCTRPLVPGRDI
        M LGKR RPP+K+T S++EI FDL     P+EQ P      ++                  +MVSPR   RRHS D   S +FL +CSLC R LV GRDI
Subjt:  MSLGKRSRPPMKKTASMTEITFDLGGSAAPAEQLPPPPLTNMIG-----------------SMVSPR-NHRRHSVDLQDSANFLAACSLCTRPLVPGRDI

Query:  YMYRGDRGFCSDECRQKQMKQDERMEK
        YMYRGDR FCS ECRQ+Q+  DER EK
Subjt:  YMYRGDRGFCSDECRQKQMKQDERMEK

Q9FGQ9 FCS-Like Zinc finger 11.5e-1053.85Show/hide
Query:  SMVSPRNHRRHSVDLQDSANFLAACSLCTRPLVPGRDIYMYRGDRGFCSDECRQKQMKQDERMEK
        S+VS R H     D+Q   +FL +C LC +PL   RDIYMYRGD  FCS+ECRQ+Q+++DE  EK
Subjt:  SMVSPRNHRRHSVDLQDSANFLAACSLCTRPLVPGRDIYMYRGDRGFCSDECRQKQMKQDERMEK

Q9LV75 Protein INCREASED RESISTANCE TO MYZUS PERSICAE 11.4e-1137.82Show/hide
Query:  MSLGKRSRPPMKKTASMTEITFD---LGGSAAPAEQLPPPPLTNMIGSMVSPRNHRRHSVDLQDSANFLAACSLCTRPLVPGRDIYMYRGDRGFCSDECR
        M LGKR    +K+T SM  IT D   +  ++ P++ L                 H    V   +  +FL  CSLC R L   RDIYMYRG+  FCS ECR
Subjt:  MSLGKRSRPPMKKTASMTEITFD---LGGSAAPAEQLPPPPLTNMIGSMVSPRNHRRHSVDLQDSANFLAACSLCTRPLVPGRDIYMYRGDRGFCSDECR

Query:  QKQMKQDERMEKCSIASKK
        +KQ+K DE+  K    + K
Subjt:  QKQMKQDERMEKCSIASKK

Q9SGZ8 FCS-Like Zinc finger 61.9e-2445.56Show/hide
Query:  MSLGKRSRPPMKKTASMTEITFDLG--GSAAPAEQLPPPP---------------------LTNMIGSMVSPR-NHRRHSVDLQDSANFLAACSLCTRPL
        M LGKR RPP+ +T S++EI FDL     + P+ Q  P                       L   + SMV+PR N RRHS D  D+ +FL +C+LC R L
Subjt:  MSLGKRSRPPMKKTASMTEITFDLG--GSAAPAEQLPPPP---------------------LTNMIGSMVSPR-NHRRHSVDLQDSANFLAACSLCTRPL

Query:  VPGRDIYMYRGDRGFCSDECRQKQMKQDERMEKCSIASKKAAAAAAAAAGSTKAGVPPQISGKGETVAA
        VPGRDIYMYRGD+ FCS ECRQ+QM QDER EK      K+AA A   A +  A   P   GKG   AA
Subjt:  VPGRDIYMYRGDRGFCSDECRQKQMKQDERMEKCSIASKKAAAAAAAAAGSTKAGVPPQISGKGETVAA

Arabidopsis top hitse value%identityAlignment
AT1G22160.1 Protein of unknown function (DUF581)2.8e-2350.39Show/hide
Query:  MSLGKRSRPPMKKTASMTEITFDLGGSAAPAEQLPPPPLTNMIG-----------------SMVSPR-NHRRHSVDLQDSANFLAACSLCTRPLVPGRDI
        M LGKR RPP+K+T S++EI FDL     P+EQ P      ++                  +MVSPR   RRHS D   S +FL +CSLC R LV GRDI
Subjt:  MSLGKRSRPPMKKTASMTEITFDLGGSAAPAEQLPPPPLTNMIG-----------------SMVSPR-NHRRHSVDLQDSANFLAACSLCTRPLVPGRDI

Query:  YMYRGDRGFCSDECRQKQMKQDERMEK
        YMYRGDR FCS ECRQ+Q+  DER EK
Subjt:  YMYRGDRGFCSDECRQKQMKQDERMEK

AT1G78020.1 Protein of unknown function (DUF581)1.3e-2545.56Show/hide
Query:  MSLGKRSRPPMKKTASMTEITFDLG--GSAAPAEQLPPPP---------------------LTNMIGSMVSPR-NHRRHSVDLQDSANFLAACSLCTRPL
        M LGKR RPP+ +T S++EI FDL     + P+ Q  P                       L   + SMV+PR N RRHS D  D+ +FL +C+LC R L
Subjt:  MSLGKRSRPPMKKTASMTEITFDLG--GSAAPAEQLPPPP---------------------LTNMIGSMVSPR-NHRRHSVDLQDSANFLAACSLCTRPL

Query:  VPGRDIYMYRGDRGFCSDECRQKQMKQDERMEKCSIASKKAAAAAAAAAGSTKAGVPPQISGKGETVAA
        VPGRDIYMYRGD+ FCS ECRQ+QM QDER EK      K+AA A   A +  A   P   GKG   AA
Subjt:  VPGRDIYMYRGDRGFCSDECRQKQMKQDERMEKCSIASKKAAAAAAAAAGSTKAGVPPQISGKGETVAA

AT4G39795.1 Protein of unknown function (DUF581)3.9e-1740.71Show/hide
Query:  MSLGKRSRPPMKKTASMTEITFDLGGSAAPAEQLPPPPLT-----NMIGSMVSPRNHRRHSVDL---QDSANFLAACSLCTRPLVPGRDIYMYRGDRGFC
        M LG R RP M++TAS+T IT ++ G     +             N     +SP NH+R+          ++FL  C  C R L PGRDIYMY+GD  FC
Subjt:  MSLGKRSRPPMKKTASMTEITFDLGGSAAPAEQLPPPPLT-----NMIGSMVSPRNHRRHSVDL---QDSANFLAACSLCTRPLVPGRDIYMYRGDRGFC

Query:  SDECRQKQMKQDE
        S ECR++QM+ DE
Subjt:  SDECRQKQMKQDE

AT5G47060.1 Protein of unknown function (DUF581)1.1e-1153.85Show/hide
Query:  SMVSPRNHRRHSVDLQDSANFLAACSLCTRPLVPGRDIYMYRGDRGFCSDECRQKQMKQDERMEK
        S+VS R H     D+Q   +FL +C LC +PL   RDIYMYRGD  FCS+ECRQ+Q+++DE  EK
Subjt:  SMVSPRNHRRHSVDLQDSANFLAACSLCTRPLVPGRDIYMYRGDRGFCSDECRQKQMKQDERMEK

AT5G65040.1 Protein of unknown function (DUF581)9.9e-1337.82Show/hide
Query:  MSLGKRSRPPMKKTASMTEITFD---LGGSAAPAEQLPPPPLTNMIGSMVSPRNHRRHSVDLQDSANFLAACSLCTRPLVPGRDIYMYRGDRGFCSDECR
        M LGKR    +K+T SM  IT D   +  ++ P++ L                 H    V   +  +FL  CSLC R L   RDIYMYRG+  FCS ECR
Subjt:  MSLGKRSRPPMKKTASMTEITFD---LGGSAAPAEQLPPPPLTNMIGSMVSPRNHRRHSVDLQDSANFLAACSLCTRPLVPGRDIYMYRGDRGFCSDECR

Query:  QKQMKQDERMEKCSIASKK
        +KQ+K DE+  K    + K
Subjt:  QKQMKQDERMEKCSIASKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCTGGGCAAGAGGTCGCGTCCGCCGATGAAAAAGACGGCGAGCATGACGGAGATCACCTTCGATCTGGGCGGCTCCGCCGCGCCCGCCGAGCAATTACCTCCGCC
GCCGCTCACGAATATGATCGGATCAATGGTTTCCCCCAGAAACCACAGAAGGCATTCCGTCGATCTACAGGATTCCGCTAATTTCCTCGCGGCTTGCTCTCTCTGCACCC
GCCCTCTAGTCCCGGGCCGTGATATTTACATGTACAGGGGGGACAGGGGATTTTGTAGCGACGAATGCAGGCAGAAGCAAATGAAGCAAGATGAGAGAATGGAGAAGTGC
AGTATAGCATCAAAAAAAGCAGCGGCGGCGGCGGCGGCGGCGGCGGGTTCTACGAAGGCCGGCGTTCCACCTCAGATCTCCGGCAAAGGAGAGACCGTCGCGGCTTCA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCTGGGCAAGAGGTCGCGTCCGCCGATGAAAAAGACGGCGAGCATGACGGAGATCACCTTCGATCTGGGCGGCTCCGCCGCGCCCGCCGAGCAATTACCTCCGCC
GCCGCTCACGAATATGATCGGATCAATGGTTTCCCCCAGAAACCACAGAAGGCATTCCGTCGATCTACAGGATTCCGCTAATTTCCTCGCGGCTTGCTCTCTCTGCACCC
GCCCTCTAGTCCCGGGCCGTGATATTTACATGTACAGGGGGGACAGGGGATTTTGTAGCGACGAATGCAGGCAGAAGCAAATGAAGCAAGATGAGAGAATGGAGAAGTGC
AGTATAGCATCAAAAAAAGCAGCGGCGGCGGCGGCGGCGGCGGCGGGTTCTACGAAGGCCGGCGTTCCACCTCAGATCTCCGGCAAAGGAGAGACCGTCGCGGCTTCA
Protein sequenceShow/hide protein sequence
MSLGKRSRPPMKKTASMTEITFDLGGSAAPAEQLPPPPLTNMIGSMVSPRNHRRHSVDLQDSANFLAACSLCTRPLVPGRDIYMYRGDRGFCSDECRQKQMKQDERMEKC
SIASKKAAAAAAAAAGSTKAGVPPQISGKGETVAAS