; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS008281 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008281
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionWW domain-containing protein
Genome locationscaffold4:150541..151200
RNA-Seq ExpressionMS008281
SyntenyMS008281
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001202 - WW domain
IPR036020 - WW domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591744.1 hypothetical protein SDJN03_14090, partial [Cucurbita argyrosperma subsp. sororia]3.4e-4671.83Show/hide
Query:  DIELHLETPLPLEWQRCLDIQSGQIHFYNTKTRKRSFKDPRRP-DQPRSSPGEDDPLSLDLELNLNCQS-------KKKSDGVIMSGLGRGSIHG---PS
        DIEL LETPLPLEWQRCLDIQSGQI+FYNTKT+KR+  DPRR  + P S  GE  PLSLDLELNLNCQS       KKKSDG++  GLG+G   G   P 
Subjt:  DIELHLETPLPLEWQRCLDIQSGQIHFYNTKTRKRSFKDPRRP-DQPRSSPGEDDPLSLDLELNLNCQS-------KKKSDGVIMSGLGRGSIHG---PS

Query:  WLRLERDEQAEMVARVCMQCHLLVMVLKSSPTCPNCKFIHPI
        WLR ER +Q EM ARVCMQCHLLVM+LKSSPTCPNCKFIHPI
Subjt:  WLRLERDEQAEMVARVCMQCHLLVMVLKSSPTCPNCKFIHPI

KAG7024627.1 hypothetical protein SDJN02_13445 [Cucurbita argyrosperma subsp. argyrosperma]3.4e-4671.83Show/hide
Query:  DIELHLETPLPLEWQRCLDIQSGQIHFYNTKTRKRSFKDPRRP-DQPRSSPGEDDPLSLDLELNLNCQS-------KKKSDGVIMSGLGRGSIHG---PS
        DIEL LETPLPLEWQRCLDIQSGQI+FYNTKT+KR+  DPRR  + P S  GE  PLSLDLELNLNCQS       KKKSDG++  GLG+G   G   P 
Subjt:  DIELHLETPLPLEWQRCLDIQSGQIHFYNTKTRKRSFKDPRRP-DQPRSSPGEDDPLSLDLELNLNCQS-------KKKSDGVIMSGLGRGSIHG---PS

Query:  WLRLERDEQAEMVARVCMQCHLLVMVLKSSPTCPNCKFIHPI
        WLR ER +Q EM ARVCMQCHLLVM+LKSSPTCPNCKFIHPI
Subjt:  WLRLERDEQAEMVARVCMQCHLLVMVLKSSPTCPNCKFIHPI

XP_022138158.1 uncharacterized protein LOC111009395 [Momordica charantia]2.3e-7199.24Show/hide
Query:  DIELHLETPLPLEWQRCLDIQSGQIHFYNTKTRKRSFKDPRRPDQPRSSPGEDDPLSLDLELNLNCQSKKKSDGVIMSGLGRGSIHGPSWLRLERDEQAE
        DIELHLETPLPLEWQRCLDIQSGQIHFYNTKTRKRSFKDPRRPDQPRSSPGEDDPLSLDLELNLNCQSKKKSDGVIMSGLGRGSIHGPSWLRLER+EQAE
Subjt:  DIELHLETPLPLEWQRCLDIQSGQIHFYNTKTRKRSFKDPRRPDQPRSSPGEDDPLSLDLELNLNCQSKKKSDGVIMSGLGRGSIHGPSWLRLERDEQAE

Query:  MVARVCMQCHLLVMVLKSSPTCPNCKFIHPIP
        MVARVCMQCHLLVMVLKSSPTCPNCKFIHPIP
Subjt:  MVARVCMQCHLLVMVLKSSPTCPNCKFIHPIP

XP_022976044.1 uncharacterized protein LOC111476564 [Cucurbita maxima]2.2e-4570.21Show/hide
Query:  DIELHLETPLPLEWQRCLDIQSGQIHFYNTKTRKRSFKDPRRPDQPRSSPGEDDPLSLDLELNLNCQS-------KKKSDGVIMSGLGRGSIHG---PSW
        DIEL LETPLPLEWQRCLDIQSGQI+FYNTKT+KR+  DPRR  +  +S G  +PLSLDLELNLNCQS       KKKSDG++  GLG+G   G   P W
Subjt:  DIELHLETPLPLEWQRCLDIQSGQIHFYNTKTRKRSFKDPRRPDQPRSSPGEDDPLSLDLELNLNCQS-------KKKSDGVIMSGLGRGSIHG---PSW

Query:  LRLERDEQAEMVARVCMQCHLLVMVLKSSPTCPNCKFIHPI
        LR ER +Q EM ARVCMQCHLLVM+LKSSPTCPNCKF HPI
Subjt:  LRLERDEQAEMVARVCMQCHLLVMVLKSSPTCPNCKFIHPI

XP_023536113.1 uncharacterized protein LOC111797357 [Cucurbita pepo subsp. pepo]3.4e-4671.83Show/hide
Query:  DIELHLETPLPLEWQRCLDIQSGQIHFYNTKTRKRSFKDPRRP-DQPRSSPGEDDPLSLDLELNLNCQS-------KKKSDGVIMSGLGRGSIHG---PS
        DIEL LETPLPLEWQRCLDIQSGQI+FYNTKT+KR+  DPRR  + P S  GE  PLSLDLELNLNCQS       KKKSDG++  GLG+G   G   P 
Subjt:  DIELHLETPLPLEWQRCLDIQSGQIHFYNTKTRKRSFKDPRRP-DQPRSSPGEDDPLSLDLELNLNCQS-------KKKSDGVIMSGLGRGSIHG---PS

Query:  WLRLERDEQAEMVARVCMQCHLLVMVLKSSPTCPNCKFIHPI
        WLR ER +Q EM ARVCMQCHLLVM+LKSSPTCPNCKFIHPI
Subjt:  WLRLERDEQAEMVARVCMQCHLLVMVLKSSPTCPNCKFIHPI

TrEMBL top hitse value%identityAlignment
A0A0A0LHX2 Uncharacterized protein1.9e-3963.51Show/hide
Query:  DIELHLETPLPLEWQRCLDIQSGQIHFYNTKTRKRSFKDPRRP--DQPRSSP------GEDDPLSLDLELNLNCQSKKK---------SDGVIMSGLGRG
        +IELHLETPLPLEWQRCLDIQSG+IHF+NTKT+KR+  DPRR   + P ++P       +   LSLDLELNLNCQSKKK           G++       
Subjt:  DIELHLETPLPLEWQRCLDIQSGQIHFYNTKTRKRSFKDPRRP--DQPRSSP------GEDDPLSLDLELNLNCQSKKK---------SDGVIMSGLGRG

Query:  SIHGPSWLRLERDEQAEMVARVCMQCHLLVMVLKSSPTCPNCKFIHPI
         I  P WLR ER EQ EMVARVCMQCHLLVM+LKSSPTCPNCKFIHPI
Subjt:  SIHGPSWLRLERDEQAEMVARVCMQCHLLVMVLKSSPTCPNCKFIHPI

A0A6J1CC88 uncharacterized protein LOC1110093951.1e-7199.24Show/hide
Query:  DIELHLETPLPLEWQRCLDIQSGQIHFYNTKTRKRSFKDPRRPDQPRSSPGEDDPLSLDLELNLNCQSKKKSDGVIMSGLGRGSIHGPSWLRLERDEQAE
        DIELHLETPLPLEWQRCLDIQSGQIHFYNTKTRKRSFKDPRRPDQPRSSPGEDDPLSLDLELNLNCQSKKKSDGVIMSGLGRGSIHGPSWLRLER+EQAE
Subjt:  DIELHLETPLPLEWQRCLDIQSGQIHFYNTKTRKRSFKDPRRPDQPRSSPGEDDPLSLDLELNLNCQSKKKSDGVIMSGLGRGSIHGPSWLRLERDEQAE

Query:  MVARVCMQCHLLVMVLKSSPTCPNCKFIHPIP
        MVARVCMQCHLLVMVLKSSPTCPNCKFIHPIP
Subjt:  MVARVCMQCHLLVMVLKSSPTCPNCKFIHPIP

A0A6J1F8N8 uncharacterized protein LOC1114431361.1e-4571.13Show/hide
Query:  DIELHLETPLPLEWQRCLDIQSGQIHFYNTKTRKRSFKDPRRP-DQPRSSPGEDDPLSLDLELNLNCQS-------KKKSDGVIMSGLGRGSIHG---PS
        DIEL LETPLPLEWQRCLDIQSGQI+FYNTKT+KR+  DPRR  + P S  GE  PLSLDLELNLNCQS       KKKSDG++  GLG+G   G   P 
Subjt:  DIELHLETPLPLEWQRCLDIQSGQIHFYNTKTRKRSFKDPRRP-DQPRSSPGEDDPLSLDLELNLNCQS-------KKKSDGVIMSGLGRGSIHG---PS

Query:  WLRLERDEQAEMVARVCMQCHLLVMVLKSSPTCPNCKFIHPI
        WLR E  +Q EM ARVCMQCHLLVM+LKSSPTCPNCKFIHPI
Subjt:  WLRLERDEQAEMVARVCMQCHLLVMVLKSSPTCPNCKFIHPI

A0A6J1IME5 uncharacterized protein LOC1114765641.1e-4570.21Show/hide
Query:  DIELHLETPLPLEWQRCLDIQSGQIHFYNTKTRKRSFKDPRRPDQPRSSPGEDDPLSLDLELNLNCQS-------KKKSDGVIMSGLGRGSIHG---PSW
        DIEL LETPLPLEWQRCLDIQSGQI+FYNTKT+KR+  DPRR  +  +S G  +PLSLDLELNLNCQS       KKKSDG++  GLG+G   G   P W
Subjt:  DIELHLETPLPLEWQRCLDIQSGQIHFYNTKTRKRSFKDPRRPDQPRSSPGEDDPLSLDLELNLNCQS-------KKKSDGVIMSGLGRGSIHG---PSW

Query:  LRLERDEQAEMVARVCMQCHLLVMVLKSSPTCPNCKFIHPI
        LR ER +Q EM ARVCMQCHLLVM+LKSSPTCPNCKF HPI
Subjt:  LRLERDEQAEMVARVCMQCHLLVMVLKSSPTCPNCKFIHPI

A0A6J1J0Y6 uncharacterized protein LOC1114803197.8e-4169.57Show/hide
Query:  DIELHLETPLPLEWQRCLDIQSGQIHFYNTKTRKRSFKDPRRPDQPRSSPGEDDPLSLDLELNLNCQ-------SKKKSDGVIMSGLGRGSIHGPSWLRL
        DIELHLE+PLPLEWQRCLDIQSG+IHFYNTKTRK++  DPR   +PR  PG  DPLSLDLELNLN Q       SKKKSDG  M+ LGR      +W + 
Subjt:  DIELHLETPLPLEWQRCLDIQSGQIHFYNTKTRKRSFKDPRRPDQPRSSPGEDDPLSLDLELNLNCQ-------SKKKSDGVIMSGLGRGSIHGPSWLRL

Query:  ERDEQAEMVARVCMQCHLLVMVLKSSPTCPNCKFIHPI
            Q EM+ARVCMQCHLLVMVLKSSPTCPNCKFIHPI
Subjt:  ERDEQAEMVARVCMQCHLLVMVLKSSPTCPNCKFIHPI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G22250.1 unknown protein4.1e-1037.38Show/hide
Query:  RSSPGEDDPLSLDLELNLNCQSK-------------KKSDGVIMSGLGR------GSIHGPSWLRLERDE-----QAEMVARVCMQCHLLVMVLKSSPTC
        +S   ED    LDL LNL   S               K   VI+S   +      G    PSWL  E D+     + EM+  VCM+CH+LVM+ KS+  C
Subjt:  RSSPGEDDPLSLDLELNLNCQSK-------------KKSDGVIMSGLGR------GSIHGPSWLRLERDE-----QAEMVARVCMQCHLLVMVLKSSPTC

Query:  PNCKFIH
        PNCKF+H
Subjt:  PNCKFIH

AT1G28070.1 unknown protein5.8e-0425.93Show/hide
Query:  IELHLETPLPLEWQRCLDIQSGQIHFYNTKTRKRSFKDPRRPDQPRSSPGEDDPLSLDLELNLNCQSKKKSDGVIMSGLGRGSIH---------GPSWLR
        +EL     +P   ++CLD+++G+I++ +  +  R  +DPR+      S G           N   QS  +S G + S     S +          PS  +
Subjt:  IELHLETPLPLEWQRCLDIQSGQIHFYNTKTRKRSFKDPRRPDQPRSSPGEDDPLSLDLELNLNCQSKKKSDGVIMSGLGRGSIH---------GPSWLR

Query:  LERDEQAE--MVARVCMQCHLLVMVLKSSPTCPNC
          ++EQ E  +V   C  C +  MV K    CP C
Subjt:  LERDEQAE--MVARVCMQCHLLVMVLKSSPTCPNC

AT1G78170.1 unknown protein1.1e-1535.58Show/hide
Query:  DIELHLETPLPLEWQRCLDIQSGQIHFYNTKTRKRSF-KDPRRPDQPRSSPGEDDPLSLDLELNLN-------CQSKKKSDGVI----------------
        D ELHL TPLP +WQ           +  T    R++ KDP    QP+        +SLDLELNL+         +KK     I                
Subjt:  DIELHLETPLPLEWQRCLDIQSGQIHFYNTKTRKRSF-KDPRRPDQPRSSPGEDDPLSLDLELNLN-------CQSKKKSDGVI----------------

Query:  --MSGLGRGSIHGPSWLRLERDEQ-------AEMVARVCMQCHLLVMVLKSSPTCPNCKFIHP
           S +G G    PSWL  E  +         EMV  VCM+CH+LVM+  S+P CPNCKF+HP
Subjt:  --MSGLGRGSIHGPSWLRLERDEQ-------AEMVARVCMQCHLLVMVLKSSPTCPNCKFIHP

AT2G33510.1 CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202)9.5e-0725.81Show/hide
Query:  IELHLETPLPLEWQRCLDIQSGQIHFYNTKTRKRSFKDPRRPDQPRSSPGEDDPLSLDLELNLNCQSKKKSDGVIMSGLGRGSIHGPSWLRLERDEQAEM
        +EL+    LP  W++CLD+++G+I++ N K   R  +DPR+        G+        E +    S++ S     S               E +E+  +
Subjt:  IELHLETPLPLEWQRCLDIQSGQIHFYNTKTRKRSFKDPRRPDQPRSSPGEDDPLSLDLELNLNCQSKKKSDGVIMSGLGRGSIHGPSWLRLERDEQAEM

Query:  VARVCMQCHLLVMVLKSSPTCPNC
        V   C  C +  MV K    CP C
Subjt:  VARVCMQCHLLVMVLKSSPTCPNC

AT4G08910.1 unknown protein2.7e-0971.88Show/hide
Query:  QAEMVARVCMQCHLLVMVLKSSPTCPNCKFIH
        + EMVARVCM+CH+LVM+ K+SP CPNCKF+H
Subjt:  QAEMVARVCMQCHLLVMVLKSSPTCPNCKFIH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GACATCGAGCTCCACCTTGAGACTCCATTACCTTTGGAGTGGCAACGATGTCTGGATATTCAGTCGGGGCAGATACATTTCTACAACACGAAGACTCGGAAGAGATCCTT
CAAGGATCCAAGAAGACCGGATCAGCCGCGGAGCAGCCCCGGCGAGGATGATCCCTTGAGCTTGGACCTTGAGCTCAATCTGAATTGCCAATCAAAGAAGAAGAGCGATG
GGGTGATTATGTCTGGTTTGGGAAGAGGTTCGATACATGGTCCATCATGGCTAAGGTTGGAAAGAGACGAACAAGCTGAGATGGTGGCCAGAGTTTGCATGCAGTGTCAC
TTATTGGTTATGGTTTTAAAGTCCTCACCGACATGCCCCAATTGCAAATTCATACACCCAATACCG
mRNA sequenceShow/hide mRNA sequence
GACATCGAGCTCCACCTTGAGACTCCATTACCTTTGGAGTGGCAACGATGTCTGGATATTCAGTCGGGGCAGATACATTTCTACAACACGAAGACTCGGAAGAGATCCTT
CAAGGATCCAAGAAGACCGGATCAGCCGCGGAGCAGCCCCGGCGAGGATGATCCCTTGAGCTTGGACCTTGAGCTCAATCTGAATTGCCAATCAAAGAAGAAGAGCGATG
GGGTGATTATGTCTGGTTTGGGAAGAGGTTCGATACATGGTCCATCATGGCTAAGGTTGGAAAGAGACGAACAAGCTGAGATGGTGGCCAGAGTTTGCATGCAGTGTCAC
TTATTGGTTATGGTTTTAAAGTCCTCACCGACATGCCCCAATTGCAAATTCATACACCCAATACCG
Protein sequenceShow/hide protein sequence
DIELHLETPLPLEWQRCLDIQSGQIHFYNTKTRKRSFKDPRRPDQPRSSPGEDDPLSLDLELNLNCQSKKKSDGVIMSGLGRGSIHGPSWLRLERDEQAEMVARVCMQCH
LLVMVLKSSPTCPNCKFIHPIP