; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS008282 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008282
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRetrotransposon-derived protein PEG10, putative
Genome locationscaffold4:153339..153756
RNA-Seq ExpressionMS008282
SyntenyMS008282
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038606.1 putative Retrotransposon-derived protein PEG10 [Cucumis melo var. makuwa]2.3e-2977.67Show/hide
Query:  MEKVEAESRDEAMR-SRTAFRCAKAAFVLSSLKSSQNRYLRATVDEIVKEKEKLRKTLGDLKVELARERLRNKRIKLCGLMEFVLQILLVITLSSFFFFI
        ME VEAES+DEAMR S+TA RCAKAAF+LSSLKSSQNR LRAT  E  KE++ LRKT+GDLK++LARERLRNKRIKLCGLMEFVLQ+LLVI+LSS   F+
Subjt:  MEKVEAESRDEAMR-SRTAFRCAKAAFVLSSLKSSQNRYLRATVDEIVKEKEKLRKTLGDLKVELARERLRNKRIKLCGLMEFVLQILLVITLSSFFFFI

Query:  AFK
        AFK
Subjt:  AFK

KAG7031715.1 hypothetical protein SDJN02_05756, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-3280.58Show/hide
Query:  MEKVEAESRDEAMRSRTAFRCAKAAFVLSSLKSSQNRYLRATVDEIVKEKEKLRKTLGDLKVELARERLRNKRIKLCGLMEFVLQILLVITLSSFFFFIA
        ME VEAESRDEAMRS+TAFRCAKAAF++SS KS QNR LRA+VDE  KEKE+LRK +GDLK+ELA ER RN+RIKLCGLMEFVLQ+LLVI+LSSFF FIA
Subjt:  MEKVEAESRDEAMRSRTAFRCAKAAFVLSSLKSSQNRYLRATVDEIVKEKEKLRKTLGDLKVELARERLRNKRIKLCGLMEFVLQILLVITLSSFFFFIA

Query:  FKS
        FKS
Subjt:  FKS

XP_011652624.1 uncharacterized protein LOC105435036 [Cucumis sativus]2.1e-2775.49Show/hide
Query:  MEKVEAESRDEAMR-SRTAFRCAKAAFVLSSLKSSQNRYLRATVDEIVKEKEKLRKTLGDLKVELARERLRNKRIKLCGLMEFVLQILLVITLSSFFFFI
        ME VEAE+++EAMR S+TA RCAKAAF+LSSLKSSQNR LRATV E  KEK+ L KT+GDLK++LARER+RNKRIKLCGLMEFVLQ+LLV++LSS F F 
Subjt:  MEKVEAESRDEAMR-SRTAFRCAKAAFVLSSLKSSQNRYLRATVDEIVKEKEKLRKTLGDLKVELARERLRNKRIKLCGLMEFVLQILLVITLSSFFFFI

Query:  AF
        AF
Subjt:  AF

XP_022138206.1 uncharacterized protein LOC111009432 [Momordica charantia]2.0e-4198.08Show/hide
Query:  MEKVEAESRDEAMRSRTAFRCAKAAFVLSSLKSSQNRYLRATVDEIVKEKEKLRKTLGDLKVELARERLRNKRIKLCGLMEFVLQILLVITLSSFFFFIA
        MEKVEAESRDEAMRSRTAFRCAKAAFVLSSLKSSQN YLRATV EIVKEKEKLRKTLGDLKVELARERLRNKRIKLCGLMEFVLQILLVITLSSFFFFIA
Subjt:  MEKVEAESRDEAMRSRTAFRCAKAAFVLSSLKSSQNRYLRATVDEIVKEKEKLRKTLGDLKVELARERLRNKRIKLCGLMEFVLQILLVITLSSFFFFIA

Query:  FKST
        FKST
Subjt:  FKST

XP_022940284.1 uncharacterized protein LOC111445952 [Cucurbita moschata]1.3e-3281.55Show/hide
Query:  MEKVEAESRDEAMRSRTAFRCAKAAFVLSSLKSSQNRYLRATVDEIVKEKEKLRKTLGDLKVELARERLRNKRIKLCGLMEFVLQILLVITLSSFFFFIA
        ME VEAESRDEAMRS+TAFRCAKAAF++SS KS QNR LRA+VDE  KEKE+LRK +GDLK+ELA ER RNKRIKLCGLMEFVLQ+LLVI+LSSFF FIA
Subjt:  MEKVEAESRDEAMRSRTAFRCAKAAFVLSSLKSSQNRYLRATVDEIVKEKEKLRKTLGDLKVELARERLRNKRIKLCGLMEFVLQILLVITLSSFFFFIA

Query:  FKS
        FKS
Subjt:  FKS

TrEMBL top hitse value%identityAlignment
A0A0A0LJY1 Uncharacterized protein1.0e-2775.49Show/hide
Query:  MEKVEAESRDEAMR-SRTAFRCAKAAFVLSSLKSSQNRYLRATVDEIVKEKEKLRKTLGDLKVELARERLRNKRIKLCGLMEFVLQILLVITLSSFFFFI
        ME VEAE+++EAMR S+TA RCAKAAF+LSSLKSSQNR LRATV E  KEK+ L KT+GDLK++LARER+RNKRIKLCGLMEFVLQ+LLV++LSS F F 
Subjt:  MEKVEAESRDEAMR-SRTAFRCAKAAFVLSSLKSSQNRYLRATVDEIVKEKEKLRKTLGDLKVELARERLRNKRIKLCGLMEFVLQILLVITLSSFFFFI

Query:  AF
        AF
Subjt:  AF

A0A5D3E7E0 Putative Retrotransposon-derived protein PEG101.1e-2977.67Show/hide
Query:  MEKVEAESRDEAMR-SRTAFRCAKAAFVLSSLKSSQNRYLRATVDEIVKEKEKLRKTLGDLKVELARERLRNKRIKLCGLMEFVLQILLVITLSSFFFFI
        ME VEAES+DEAMR S+TA RCAKAAF+LSSLKSSQNR LRAT  E  KE++ LRKT+GDLK++LARERLRNKRIKLCGLMEFVLQ+LLVI+LSS   F+
Subjt:  MEKVEAESRDEAMR-SRTAFRCAKAAFVLSSLKSSQNRYLRATVDEIVKEKEKLRKTLGDLKVELARERLRNKRIKLCGLMEFVLQILLVITLSSFFFFI

Query:  AFK
        AFK
Subjt:  AFK

A0A6J1C920 uncharacterized protein LOC1110094329.5e-4298.08Show/hide
Query:  MEKVEAESRDEAMRSRTAFRCAKAAFVLSSLKSSQNRYLRATVDEIVKEKEKLRKTLGDLKVELARERLRNKRIKLCGLMEFVLQILLVITLSSFFFFIA
        MEKVEAESRDEAMRSRTAFRCAKAAFVLSSLKSSQN YLRATV EIVKEKEKLRKTLGDLKVELARERLRNKRIKLCGLMEFVLQILLVITLSSFFFFIA
Subjt:  MEKVEAESRDEAMRSRTAFRCAKAAFVLSSLKSSQNRYLRATVDEIVKEKEKLRKTLGDLKVELARERLRNKRIKLCGLMEFVLQILLVITLSSFFFFIA

Query:  FKST
        FKST
Subjt:  FKST

A0A6J1FJM5 uncharacterized protein LOC1114459526.2e-3381.55Show/hide
Query:  MEKVEAESRDEAMRSRTAFRCAKAAFVLSSLKSSQNRYLRATVDEIVKEKEKLRKTLGDLKVELARERLRNKRIKLCGLMEFVLQILLVITLSSFFFFIA
        ME VEAESRDEAMRS+TAFRCAKAAF++SS KS QNR LRA+VDE  KEKE+LRK +GDLK+ELA ER RNKRIKLCGLMEFVLQ+LLVI+LSSFF FIA
Subjt:  MEKVEAESRDEAMRSRTAFRCAKAAFVLSSLKSSQNRYLRATVDEIVKEKEKLRKTLGDLKVELARERLRNKRIKLCGLMEFVLQILLVITLSSFFFFIA

Query:  FKS
        FKS
Subjt:  FKS

A0A6P5SUI7 uncharacterized protein LOC1107595567.3e-1855.14Show/hide
Query:  MEKVEAESRD---EAMRSRTAFRCAKAAFVLSSLKSSQNRYLRATVD-EIVKEKEKLRKTLGDLKVELARERLRNKRIKLCGLMEFVLQILLVITLSSFF
        ME  E +++    EA+RSR A RCAKAA +LSSLKSS NR L   +D + + EKE LR+ +GDLK+E+ARERL++KRIKLCG +E +LQ++L++ LS+FF
Subjt:  MEKVEAESRD---EAMRSRTAFRCAKAAFVLSSLKSSQNRYLRATVD-EIVKEKEKLRKTLGDLKVELARERLRNKRIKLCGLMEFVLQILLVITLSSFF

Query:  FFIAFKS
        F +AF++
Subjt:  FFIAFKS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G78172.1 unknown protein6.1e-0941.41Show/hide
Query:  SRDEAMRSRTAFRCAKAAFVLSSLKSSQNRYLRATVDEIVKEKEK--LRKTLGDLKVELARERLRNKRIKLCGLMEFVLQILLVITLSSFFFFIAFKST
        S+DE  R  TA RCA+A  +L SL SS+      T+D   +++EK   R+ + DL+ +L   +++  RIKLCGLME +L + LV+ LS+FF      ST
Subjt:  SRDEAMRSRTAFRCAKAAFVLSSLKSSQNRYLRATVDEIVKEKEK--LRKTLGDLKVELARERLRNKRIKLCGLMEFVLQILLVITLSSFFFFIAFKST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAAGTAGAGGCGGAATCCAGAGATGAAGCAATGAGATCCAGAACCGCTTTCCGATGTGCAAAAGCAGCATTTGTGCTTTCTTCGCTCAAATCCTCCCAAAATCG
CTACCTCAGAGCCACTGTCGATGAAATAGTGAAGGAGAAAGAGAAGCTGAGGAAAACTTTGGGAGATTTGAAGGTCGAGTTGGCTAGGGAGCGTCTGAGGAATAAGAGGA
TCAAGCTCTGCGGTTTGATGGAATTCGTTCTTCAGATCCTGCTGGTGATAACTCTTTCGAGCTTCTTCTTTTTTATCGCCTTCAAATCTACC
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAAGTAGAGGCGGAATCCAGAGATGAAGCAATGAGATCCAGAACCGCTTTCCGATGTGCAAAAGCAGCATTTGTGCTTTCTTCGCTCAAATCCTCCCAAAATCG
CTACCTCAGAGCCACTGTCGATGAAATAGTGAAGGAGAAAGAGAAGCTGAGGAAAACTTTGGGAGATTTGAAGGTCGAGTTGGCTAGGGAGCGTCTGAGGAATAAGAGGA
TCAAGCTCTGCGGTTTGATGGAATTCGTTCTTCAGATCCTGCTGGTGATAACTCTTTCGAGCTTCTTCTTTTTTATCGCCTTCAAATCTACC
Protein sequenceShow/hide protein sequence
MEKVEAESRDEAMRSRTAFRCAKAAFVLSSLKSSQNRYLRATVDEIVKEKEKLRKTLGDLKVELARERLRNKRIKLCGLMEFVLQILLVITLSSFFFFIAFKST