; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS008309 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008309
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGATA zinc finger domain-containing protein
Genome locationscaffold4:342392..344252
RNA-Seq ExpressionMS008309
SyntenyMS008309
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008466085.1 PREDICTED: uncharacterized protein LOC103503615 isoform X1 [Cucumis melo]2.6e-9082.44Show/hide
Query:  MCHSYQRYLFVLLNVLVIILKWPTFCLSSIVDSKVLNVGEELWRETLPLQMGSRLYHLQGLKPDTWYEVKISYPGSIPASFSLELKRDLRSPVEKQSRKL
        M HS + ++FVL +VLVII+KWP FCLSS+V+SK+LNVGEELWRETLPLQMGSRLY LQGLKPDTWYEVKISYPGSIPASFSLELKRDL SPVEKQSRKL
Subjt:  MCHSYQRYLFVLLNVLVIILKWPTFCLSSIVDSKVLNVGEELWRETLPLQMGSRLYHLQGLKPDTWYEVKISYPGSIPASFSLELKRDLRSPVEKQSRKL

Query:  LDTEKLIFRTESINLQGDQVDMHILVTVKSEGVVAIPSVQERESFIFNIVCDELLVGIPHKAWGVAILVIICLILSFIIPSRLPSWLLKANQTQGSVNHH
        LDTEKLIF+TE + LQGDQVD H+LVTVKSEGVVAIPSV+ERES +FNIVCDELL+GIPHKAWGV  LVI CLIL+FIIPS LP WLL+ NQTQG  NHH
Subjt:  LDTEKLIFRTESINLQGDQVDMHILVTVKSEGVVAIPSVQERESFIFNIVCDELLVGIPHKAWGVAILVIICLILSFIIPSRLPSWLLKANQTQGSVNHH

Query:  SSKNS
        +SKNS
Subjt:  SSKNS

XP_011652612.1 uncharacterized protein LOC101222383 isoform X1 [Cucumis sativus]5.0e-8980.98Show/hide
Query:  MCHSYQRYLFVLLNVLVIILKWPTFCLSSIVDSKVLNVGEELWRETLPLQMGSRLYHLQGLKPDTWYEVKISYPGSIPASFSLELKRDLRSPVEKQSRKL
        M HS + ++FVL++VLVII+KWPTFCLSS+V+SK+LNVGEELWRETLPLQMGSRLYHLQGLKPD WYEVKISYPGSIPASFSLELKRDL SPVEKQSRKL
Subjt:  MCHSYQRYLFVLLNVLVIILKWPTFCLSSIVDSKVLNVGEELWRETLPLQMGSRLYHLQGLKPDTWYEVKISYPGSIPASFSLELKRDLRSPVEKQSRKL

Query:  LDTEKLIFRTESINLQGDQVDMHILVTVKSEGVVAIPSVQERESFIFNIVCDELLVGIPHKAWGVAILVIICLILSFIIPSRLPSWLLKANQTQGSVNHH
        LDTEKLIF+TE + L+GDQVD H+LVTVKSEGVVAIPSV+E ES ++NIVCDELL+GIPHKAWGV  LVI CLIL+FIIPS LP WLL+ NQTQG  N H
Subjt:  LDTEKLIFRTESINLQGDQVDMHILVTVKSEGVVAIPSVQERESFIFNIVCDELLVGIPHKAWGVAILVIICLILSFIIPSRLPSWLLKANQTQGSVNHH

Query:  SSKNS
        +SKNS
Subjt:  SSKNS

XP_022134786.1 uncharacterized protein LOC111006945 isoform X1 [Momordica charantia]2.5e-109100Show/hide
Query:  MCHSYQRYLFVLLNVLVIILKWPTFCLSSIVDSKVLNVGEELWRETLPLQMGSRLYHLQGLKPDTWYEVKISYPGSIPASFSLELKRDLRSPVEKQSRKL
        MCHSYQRYLFVLLNVLVIILKWPTFCLSSIVDSKVLNVGEELWRETLPLQMGSRLYHLQGLKPDTWYEVKISYPGSIPASFSLELKRDLRSPVEKQSRKL
Subjt:  MCHSYQRYLFVLLNVLVIILKWPTFCLSSIVDSKVLNVGEELWRETLPLQMGSRLYHLQGLKPDTWYEVKISYPGSIPASFSLELKRDLRSPVEKQSRKL

Query:  LDTEKLIFRTESINLQGDQVDMHILVTVKSEGVVAIPSVQERESFIFNIVCDELLVGIPHKAWGVAILVIICLILSFIIPSRLPSWLLKANQTQGSVNHH
        LDTEKLIFRTESINLQGDQVDMHILVTVKSEGVVAIPSVQERESFIFNIVCDELLVGIPHKAWGVAILVIICLILSFIIPSRLPSWLLKANQTQGSVNHH
Subjt:  LDTEKLIFRTESINLQGDQVDMHILVTVKSEGVVAIPSVQERESFIFNIVCDELLVGIPHKAWGVAILVIICLILSFIIPSRLPSWLLKANQTQGSVNHH

Query:  SSKNS
        SSKNS
Subjt:  SSKNS

XP_023534968.1 uncharacterized protein LOC111796539 [Cucurbita pepo subsp. pepo]7.7e-9080.98Show/hide
Query:  MCHSYQRYLFVLLNVLVIILKWPTFCLSSIVDSKVLNVGEELWRETLPLQMGSRLYHLQGLKPDTWYEVKISYPGSIPASFSLELKRDLRSPVEKQSRKL
        MCHS +R+LFVL +VLVII+KWP+FCLSS+VDSK+LNVGEELWRETLPLQMGSRLYHLQGLKPD WYEVKISYPGS+PASFSLELKRDL SPV+K+SRKL
Subjt:  MCHSYQRYLFVLLNVLVIILKWPTFCLSSIVDSKVLNVGEELWRETLPLQMGSRLYHLQGLKPDTWYEVKISYPGSIPASFSLELKRDLRSPVEKQSRKL

Query:  LDTEKLIFRTESINLQGDQVDMHILVTVKSEGVVAIPSVQERESFIFNIVCDELLVGIPHKAWGVAILVIICLILSFIIPSRLPSWLLKANQTQGSVNHH
        LDTEKLIF+ ES+NLQGDQVD H+LV+V SEGVVA+PS +ER+S IFNIVCDELL+GIP +AWGV  LVIICLIL+FIIPS LPSWLL+ NQTQG  NHH
Subjt:  LDTEKLIFRTESINLQGDQVDMHILVTVKSEGVVAIPSVQERESFIFNIVCDELLVGIPHKAWGVAILVIICLILSFIIPSRLPSWLLKANQTQGSVNHH

Query:  SSKNS
        +SK+S
Subjt:  SSKNS

XP_038892686.1 uncharacterized protein LOC120081684 isoform X1 [Benincasa hispida]1.0e-8982.44Show/hide
Query:  MCHSYQRYLFVLLNVLVIILKWPTFCLSSIVDSKVLNVGEELWRETLPLQMGSRLYHLQGLKPDTWYEVKISYPGSIPASFSLELKRDLRSPVEKQSRKL
        M HS Q YLFV+ +VLV I+KWPTFCLSS+V+SK+LNVGEELWRETLPLQ+GSRLYHLQGLKPD WYEVKISYPGSIPASFSLELKRDL S VEKQSRKL
Subjt:  MCHSYQRYLFVLLNVLVIILKWPTFCLSSIVDSKVLNVGEELWRETLPLQMGSRLYHLQGLKPDTWYEVKISYPGSIPASFSLELKRDLRSPVEKQSRKL

Query:  LDTEKLIFRTESINLQGDQVDMHILVTVKSEGVVAIPSVQERESFIFNIVCDELLVGIPHKAWGVAILVIICLILSFIIPSRLPSWLLKANQTQGSVNHH
        LDTEKL+F+TE +NL GDQVD H+LVTVKSEGVVAIPSVQERES IFNI CDELL+GIPHKAWGV  LVI CLIL+FIIPS LPSWLL+ NQTQG  NHH
Subjt:  LDTEKLIFRTESINLQGDQVDMHILVTVKSEGVVAIPSVQERESFIFNIVCDELLVGIPHKAWGVAILVIICLILSFIIPSRLPSWLLKANQTQGSVNHH

Query:  SSKNS
        +SK+S
Subjt:  SSKNS

TrEMBL top hitse value%identityAlignment
A0A0A0LEU4 Uncharacterized protein2.4e-8980.98Show/hide
Query:  MCHSYQRYLFVLLNVLVIILKWPTFCLSSIVDSKVLNVGEELWRETLPLQMGSRLYHLQGLKPDTWYEVKISYPGSIPASFSLELKRDLRSPVEKQSRKL
        M HS + ++FVL++VLVII+KWPTFCLSS+V+SK+LNVGEELWRETLPLQMGSRLYHLQGLKPD WYEVKISYPGSIPASFSLELKRDL SPVEKQSRKL
Subjt:  MCHSYQRYLFVLLNVLVIILKWPTFCLSSIVDSKVLNVGEELWRETLPLQMGSRLYHLQGLKPDTWYEVKISYPGSIPASFSLELKRDLRSPVEKQSRKL

Query:  LDTEKLIFRTESINLQGDQVDMHILVTVKSEGVVAIPSVQERESFIFNIVCDELLVGIPHKAWGVAILVIICLILSFIIPSRLPSWLLKANQTQGSVNHH
        LDTEKLIF+TE + L+GDQVD H+LVTVKSEGVVAIPSV+E ES ++NIVCDELL+GIPHKAWGV  LVI CLIL+FIIPS LP WLL+ NQTQG  N H
Subjt:  LDTEKLIFRTESINLQGDQVDMHILVTVKSEGVVAIPSVQERESFIFNIVCDELLVGIPHKAWGVAILVIICLILSFIIPSRLPSWLLKANQTQGSVNHH

Query:  SSKNS
        +SKNS
Subjt:  SSKNS

A0A1S3CRU2 uncharacterized protein LOC103503615 isoform X11.3e-9082.44Show/hide
Query:  MCHSYQRYLFVLLNVLVIILKWPTFCLSSIVDSKVLNVGEELWRETLPLQMGSRLYHLQGLKPDTWYEVKISYPGSIPASFSLELKRDLRSPVEKQSRKL
        M HS + ++FVL +VLVII+KWP FCLSS+V+SK+LNVGEELWRETLPLQMGSRLY LQGLKPDTWYEVKISYPGSIPASFSLELKRDL SPVEKQSRKL
Subjt:  MCHSYQRYLFVLLNVLVIILKWPTFCLSSIVDSKVLNVGEELWRETLPLQMGSRLYHLQGLKPDTWYEVKISYPGSIPASFSLELKRDLRSPVEKQSRKL

Query:  LDTEKLIFRTESINLQGDQVDMHILVTVKSEGVVAIPSVQERESFIFNIVCDELLVGIPHKAWGVAILVIICLILSFIIPSRLPSWLLKANQTQGSVNHH
        LDTEKLIF+TE + LQGDQVD H+LVTVKSEGVVAIPSV+ERES +FNIVCDELL+GIPHKAWGV  LVI CLIL+FIIPS LP WLL+ NQTQG  NHH
Subjt:  LDTEKLIFRTESINLQGDQVDMHILVTVKSEGVVAIPSVQERESFIFNIVCDELLVGIPHKAWGVAILVIICLILSFIIPSRLPSWLLKANQTQGSVNHH

Query:  SSKNS
        +SKNS
Subjt:  SSKNS

A0A6J1BYR8 uncharacterized protein LOC111006945 isoform X11.2e-109100Show/hide
Query:  MCHSYQRYLFVLLNVLVIILKWPTFCLSSIVDSKVLNVGEELWRETLPLQMGSRLYHLQGLKPDTWYEVKISYPGSIPASFSLELKRDLRSPVEKQSRKL
        MCHSYQRYLFVLLNVLVIILKWPTFCLSSIVDSKVLNVGEELWRETLPLQMGSRLYHLQGLKPDTWYEVKISYPGSIPASFSLELKRDLRSPVEKQSRKL
Subjt:  MCHSYQRYLFVLLNVLVIILKWPTFCLSSIVDSKVLNVGEELWRETLPLQMGSRLYHLQGLKPDTWYEVKISYPGSIPASFSLELKRDLRSPVEKQSRKL

Query:  LDTEKLIFRTESINLQGDQVDMHILVTVKSEGVVAIPSVQERESFIFNIVCDELLVGIPHKAWGVAILVIICLILSFIIPSRLPSWLLKANQTQGSVNHH
        LDTEKLIFRTESINLQGDQVDMHILVTVKSEGVVAIPSVQERESFIFNIVCDELLVGIPHKAWGVAILVIICLILSFIIPSRLPSWLLKANQTQGSVNHH
Subjt:  LDTEKLIFRTESINLQGDQVDMHILVTVKSEGVVAIPSVQERESFIFNIVCDELLVGIPHKAWGVAILVIICLILSFIIPSRLPSWLLKANQTQGSVNHH

Query:  SSKNS
        SSKNS
Subjt:  SSKNS

A0A6J1F779 uncharacterized protein LOC1114429914.3e-8678.54Show/hide
Query:  MCHSYQRYLFVLLNVLVIILKWPTFCLSSIVDSKVLNVGEELWRETLPLQMGSRLYHLQGLKPDTWYEVKISYPGSIPASFSLELKRDLRSPVEKQSRKL
        M HS +R+ FVL +VLVII+KWP+FCLSS+VDSK LNVGEELWRETLPLQMGSRLYHLQGLKPD WYEVKISYPGS+PASFSLELKRDL SPV+K+SRKL
Subjt:  MCHSYQRYLFVLLNVLVIILKWPTFCLSSIVDSKVLNVGEELWRETLPLQMGSRLYHLQGLKPDTWYEVKISYPGSIPASFSLELKRDLRSPVEKQSRKL

Query:  LDTEKLIFRTESINLQGDQVDMHILVTVKSEGVVAIPSVQERESFIFNIVCDELLVGIPHKAWGVAILVIICLILSFIIPSRLPSWLLKANQTQGSVNHH
        LDTEKLIF+ ES+NL GDQVD H+LV+V SEGVVA+ + +ER+S IFNIVCDELL+GIPH+AWGV  LVIICLIL+FI+PS LPSWLL+ NQTQG  NHH
Subjt:  LDTEKLIFRTESINLQGDQVDMHILVTVKSEGVVAIPSVQERESFIFNIVCDELLVGIPHKAWGVAILVIICLILSFIIPSRLPSWLLKANQTQGSVNHH

Query:  SSKNS
        +SK+S
Subjt:  SSKNS

A0A6J1IJY5 uncharacterized protein LOC1114755552.4e-8980.98Show/hide
Query:  MCHSYQRYLFVLLNVLVIILKWPTFCLSSIVDSKVLNVGEELWRETLPLQMGSRLYHLQGLKPDTWYEVKISYPGSIPASFSLELKRDLRSPVEKQSRKL
        M HS +R+LFVL +VLVII+KWP+FCLSS+VDSK+LNVGEELWRETLPLQMGSRLYHLQGLKPD WYEVKISYPGS+PASFSLELKRDL SPV+K+SRKL
Subjt:  MCHSYQRYLFVLLNVLVIILKWPTFCLSSIVDSKVLNVGEELWRETLPLQMGSRLYHLQGLKPDTWYEVKISYPGSIPASFSLELKRDLRSPVEKQSRKL

Query:  LDTEKLIFRTESINLQGDQVDMHILVTVKSEGVVAIPSVQERESFIFNIVCDELLVGIPHKAWGVAILVIICLILSFIIPSRLPSWLLKANQTQGSVNHH
        LDTEKLIF+TES+NLQGDQVD H+LV+V SEGVVA+ S +ER+S IFNIVCDELL+GIPH+AWGV  LVIICLIL+FIIPS LPSWLL+ NQTQG  NHH
Subjt:  LDTEKLIFRTESINLQGDQVDMHILVTVKSEGVVAIPSVQERESFIFNIVCDELLVGIPHKAWGVAILVIICLILSFIIPSRLPSWLLKANQTQGSVNHH

Query:  SSKNS
        +SK+S
Subjt:  SSKNS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G20890.1 unknown protein1.9e-4652.78Show/hide
Query:  LLNVLVIILKWPTFCLSS--IVDSKVLNVGEELWRETLPLQMGSRLYHLQGLKPDTWYEVKISYPGSIPASFSLE-LKRDLRSPVEKQSRKLLDTEKLIF
        LL  L++ + + T C S   +   K L  G+ELW+ETLPL+ GSR+Y LQGLK ++WYEVKISYP SIPA FSL+ LK  +        R+LL+TEKLIF
Subjt:  LLNVLVIILKWPTFCLSS--IVDSKVLNVGEELWRETLPLQMGSRLYHLQGLKPDTWYEVKISYPGSIPASFSLE-LKRDLRSPVEKQSRKLLDTEKLIF

Query:  RTESINLQGDQVDMHILVTVKSEGVVAIPSVQERESFIFNIVCDELLVGIPHKAWGVAILVIICLILSFIIPSRLPSWLL
        +TESI    ++  +++LVTV+ EG+VAIP+V+ER S I+NIVC+E L+GIPH +W V +LV++CL+++ I+P  LPS+LL
Subjt:  RTESINLQGDQVDMHILVTVKSEGVVAIPSVQERESFIFNIVCDELLVGIPHKAWGVAILVIICLILSFIIPSRLPSWLL

AT1G76480.1 unknown protein3.5e-2444.62Show/hide
Query:  IPASFSLELKRDLRSPVE-KQSRKLLDTEKLIFRTESINLQGDQVDMHILVTVKSEGVVAIPSVQERESFIFNIVCDELLVGIPHKAWGVAILVIICLIL
        IPA  SL+L ++    ++  Q R+LL+TEKLIF+ ES+    ++  +++LVT++ EG+VAIP+ +ER   I+NIVC+E L+GIP+ +W V +LV +CL++
Subjt:  IPASFSLELKRDLRSPVE-KQSRKLLDTEKLIFRTESINLQGDQVDMHILVTVKSEGVVAIPSVQERESFIFNIVCDELLVGIPHKAWGVAILVIICLIL

Query:  SFIIPSRLPSWLLKANQTQGSVNHHSSKNS
        SFI+P  LPS LL  +Q   S +    K+S
Subjt:  SFIIPSRLPSWLLKANQTQGSVNHHSSKNS

AT1G76480.2 unknown protein7.8e-4849.24Show/hide
Query:  FVLLNVLVIILKWPTFCLSSIVDSKVLNVGEELWRETLPLQMGSRLYHLQGLKPDTWYEVKISYPGSIPASFSLELKRDLRSPVE-KQSRKLLDTEKLIF
        ++LL ++V++   P  C  ++ D K L VG+ELWRETLPLQ GSR+Y LQGLK ++WYEVKISYP SIPA  SL+L ++    ++  Q R+LL+TEKLIF
Subjt:  FVLLNVLVIILKWPTFCLSSIVDSKVLNVGEELWRETLPLQMGSRLYHLQGLKPDTWYEVKISYPGSIPASFSLELKRDLRSPVE-KQSRKLLDTEKLIF

Query:  RTESINLQGDQVDMHILVTVKSEGVVAIPSVQERESFIFNIVCDELLVGIPHKAWGVAILVIICLILSFIIPSRLPSWLLKANQTQGSVNHHSSKNS
        + ES+    ++  +++LVT++ EG+VAIP+ +ER   I+NIVC+E L+GIP+ +W V +LV +CL++SFI+P  LPS LL  +Q   S +    K+S
Subjt:  RTESINLQGDQVDMHILVTVKSEGVVAIPSVQERESFIFNIVCDELLVGIPHKAWGVAILVIICLILSFIIPSRLPSWLLKANQTQGSVNHHSSKNS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTCATTCATACCAGCGATATCTATTTGTTCTTTTGAACGTTCTCGTCATCATTTTGAAATGGCCAACTTTCTGCCTGAGTAGTATAGTTGATAGTAAAGTTTTAAA
CGTTGGAGAGGAGCTGTGGAGGGAAACGTTACCGTTACAAATGGGTTCTCGTCTTTACCACCTTCAAGGACTCAAACCTGATACGTGGTATGAAGTGAAGATATCATATC
CAGGCTCTATTCCTGCTAGCTTTTCATTAGAGCTAAAGAGAGACTTGAGAAGCCCCGTTGAGAAGCAGAGCAGAAAACTACTTGACACTGAAAAGCTTATTTTTAGGACA
GAAAGCATAAACTTGCAGGGTGATCAGGTTGATATGCATATATTGGTCACTGTGAAGTCTGAGGGAGTCGTTGCCATACCATCCGTCCAGGAAAGGGAGTCATTCATCTT
TAATATAGTTTGTGACGAACTACTTGTAGGCATCCCGCACAAAGCCTGGGGGGTTGCAATCTTGGTTATAATCTGCTTGATATTGTCATTCATCATCCCATCTCGTCTAC
CGTCATGGCTGCTAAAGGCTAACCAAACTCAAGGATCAGTTAATCATCATTCTTCCAAGAATTCT
mRNA sequenceShow/hide mRNA sequence
ATGTGTCATTCATACCAGCGATATCTATTTGTTCTTTTGAACGTTCTCGTCATCATTTTGAAATGGCCAACTTTCTGCCTGAGTAGTATAGTTGATAGTAAAGTTTTAAA
CGTTGGAGAGGAGCTGTGGAGGGAAACGTTACCGTTACAAATGGGTTCTCGTCTTTACCACCTTCAAGGACTCAAACCTGATACGTGGTATGAAGTGAAGATATCATATC
CAGGCTCTATTCCTGCTAGCTTTTCATTAGAGCTAAAGAGAGACTTGAGAAGCCCCGTTGAGAAGCAGAGCAGAAAACTACTTGACACTGAAAAGCTTATTTTTAGGACA
GAAAGCATAAACTTGCAGGGTGATCAGGTTGATATGCATATATTGGTCACTGTGAAGTCTGAGGGAGTCGTTGCCATACCATCCGTCCAGGAAAGGGAGTCATTCATCTT
TAATATAGTTTGTGACGAACTACTTGTAGGCATCCCGCACAAAGCCTGGGGGGTTGCAATCTTGGTTATAATCTGCTTGATATTGTCATTCATCATCCCATCTCGTCTAC
CGTCATGGCTGCTAAAGGCTAACCAAACTCAAGGATCAGTTAATCATCATTCTTCCAAGAATTCT
Protein sequenceShow/hide protein sequence
MCHSYQRYLFVLLNVLVIILKWPTFCLSSIVDSKVLNVGEELWRETLPLQMGSRLYHLQGLKPDTWYEVKISYPGSIPASFSLELKRDLRSPVEKQSRKLLDTEKLIFRT
ESINLQGDQVDMHILVTVKSEGVVAIPSVQERESFIFNIVCDELLVGIPHKAWGVAILVIICLILSFIIPSRLPSWLLKANQTQGSVNHHSSKNS