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MS008325 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008325
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold4:483558..483701
RNA-Seq ExpressionMS008325
SyntenyMS008325
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591711.1 hypothetical protein SDJN03_14057, partial [Cucurbita argyrosperma subsp. sororia]1.5e-1272.55Show/hide
Query:  MCCFFSCCLHWDKLRSFLGCP---DHRHPPPIPPENAASSPPDKILPLHTV
        MCCFFSCCLHW+KLRS LGCP   DHRH P IPPE  A SPPDK  P+HT+
Subjt:  MCCFFSCCLHWDKLRSFLGCP---DHRHPPPIPPENAASSPPDKILPLHTV

XP_008466113.1 PREDICTED: uncharacterized protein At5g65660-like [Cucumis melo]1.2e-1271.15Show/hide
Query:  MCCFFSCCLHWDKLRSFLGCPD--HRHPPPIPPEN--AASSPPDKILPLHTV
        MCCFF CCLHW+KLRSFLGCPD  H H PPIPP +  AA SPPDK  P+HT+
Subjt:  MCCFFSCCLHWDKLRSFLGCPD--HRHPPPIPPEN--AASSPPDKILPLHTV

XP_022140744.1 uncharacterized protein At5g65660-like [Momordica charantia]2.3e-21100Show/hide
Query:  MCCFFSCCLHWDKLRSFLGCPDHRHPPPIPPENAASSPPDKILPLHT
        MCCFFSCCLHWDKLRSFLGCPDHRHPPPIPPENAASSPPDKILPLHT
Subjt:  MCCFFSCCLHWDKLRSFLGCPDHRHPPPIPPENAASSPPDKILPLHT

XP_022936981.1 uncharacterized protein At5g65660-like [Cucurbita moschata]1.5e-1272.55Show/hide
Query:  MCCFFSCCLHWDKLRSFLGCP---DHRHPPPIPPENAASSPPDKILPLHTV
        MCCFFSCCLHW+KLRS LGCP   DHRH P IPPE  A SPPDK  P+HT+
Subjt:  MCCFFSCCLHWDKLRSFLGCP---DHRHPPPIPPENAASSPPDKILPLHTV

XP_038899315.1 uncharacterized protein At5g65660-like [Benincasa hispida]4.2e-1579.59Show/hide
Query:  MCCFFSCCLHWDKLRSFLGCPD--HRHPPPIPPENAASSPPDKILPLHT
        MCCFFSCCLHW+KLRSFLGCPD  H H PPIPP+ AA SPPDKI P+HT
Subjt:  MCCFFSCCLHWDKLRSFLGCPD--HRHPPPIPPENAASSPPDKILPLHT

TrEMBL top hitse value%identityAlignment
A0A1S3CQS4 uncharacterized protein At5g65660-like5.6e-1371.15Show/hide
Query:  MCCFFSCCLHWDKLRSFLGCPD--HRHPPPIPPEN--AASSPPDKILPLHTV
        MCCFF CCLHW+KLRSFLGCPD  H H PPIPP +  AA SPPDK  P+HT+
Subjt:  MCCFFSCCLHWDKLRSFLGCPD--HRHPPPIPPEN--AASSPPDKILPLHTV

A0A5D3E545 Uncharacterized protein5.6e-1371.15Show/hide
Query:  MCCFFSCCLHWDKLRSFLGCPD--HRHPPPIPPEN--AASSPPDKILPLHTV
        MCCFF CCLHW+KLRSFLGCPD  H H PPIPP +  AA SPPDK  P+HT+
Subjt:  MCCFFSCCLHWDKLRSFLGCPD--HRHPPPIPPEN--AASSPPDKILPLHTV

A0A6J1CGJ4 uncharacterized protein At5g65660-like1.1e-21100Show/hide
Query:  MCCFFSCCLHWDKLRSFLGCPDHRHPPPIPPENAASSPPDKILPLHT
        MCCFFSCCLHWDKLRSFLGCPDHRHPPPIPPENAASSPPDKILPLHT
Subjt:  MCCFFSCCLHWDKLRSFLGCPDHRHPPPIPPENAASSPPDKILPLHT

A0A6J1F906 uncharacterized protein At5g65660-like7.3e-1372.55Show/hide
Query:  MCCFFSCCLHWDKLRSFLGCP---DHRHPPPIPPENAASSPPDKILPLHTV
        MCCFFSCCLHW+KLRS LGCP   DHRH P IPPE  A SPPDK  P+HT+
Subjt:  MCCFFSCCLHWDKLRSFLGCP---DHRHPPPIPPENAASSPPDKILPLHTV

A0A6J1IEI5 uncharacterized protein At5g65660-like2.8e-1270Show/hide
Query:  MCCFFSCCLHWDKLRSFLGCPDHRH--PPPIPPENAASSPPDKILPLHTV
        MCCFFSCCLHW+KLRS LGCPDH     P IPPE  A SPPDK  P+HT+
Subjt:  MCCFFSCCLHWDKLRSFLGCPDHRH--PPPIPPENAASSPPDKILPLHTV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTGCTTTTTTTCTTGTTGCCTTCACTGGGATAAGCTCCGATCATTCCTCGGCTGTCCCGACCACCGCCATCCACCTCCTATTCCGCCGGAAAACGCCGCCTCATC
GCCGCCAGACAAGATTCTGCCTCTCCATACGGTG
mRNA sequenceShow/hide mRNA sequence
ATGTGTTGCTTTTTTTCTTGTTGCCTTCACTGGGATAAGCTCCGATCATTCCTCGGCTGTCCCGACCACCGCCATCCACCTCCTATTCCGCCGGAAAACGCCGCCTCATC
GCCGCCAGACAAGATTCTGCCTCTCCATACGGTG
Protein sequenceShow/hide protein sequence
MCCFFSCCLHWDKLRSFLGCPDHRHPPPIPPENAASSPPDKILPLHTV