; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS008326 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008326
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionBasic helix-loop-helix transcription factor
Genome locationscaffold4:491561..492645
RNA-Seq ExpressionMS008326
SyntenyMS008326
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591710.1 Transcription factor basic helix-loop-helix 93, partial [Cucurbita argyrosperma subsp. sororia]6.0e-8362.21Show/hide
Query:  MNEQYLLDEVAALRREMNWELALPTEISGWN---TNNLVPDSASATSFCLPPLDDVHNNNVNSYLLSSDDLIPFHGGASILSSLE-GCDNGEYYPIANME
        +N+ YL +E+ AL+RE++WE A+PT+I+ WN   ++++  D  + + F          N    Y   +D    F   AS   S+     NGE YPI NME
Subjt:  MNEQYLLDEVAALRREMNWELALPTEISGWN---TNNLVPDSASATSFCLPPLDDVHNNNVNSYLLSSDDLIPFHGGASILSSLE-GCDNGEYYPIANME

Query:  EEELGILEDEIHNLEVQASCCKAEPVAVVQSPEAVPTFSAGACAHK----SSKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAI
        EEELGILEDEIHNLEVQA+C     V  VQSPE +   +AG    K    + KKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAI
Subjt:  EEELGILEDEIHNLEVQASCCKAEPVAVVQSPEAVPTFSAGACAHK----SSKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAI

Query:  DYVKELLEKISNLQREIEVGNPNPSKLGSSSSVGILRDVKPNDYLVRNSPKFNVERRDMDTRIEVCCAPKPGLLLSTVHTLEALGLDIQHCVISSFNDFA
        +YVKEL+EKI+NLQREIE GN +P+KL      GILRD+K N+YLVRNS KFNVERR+ +T IE+CCA KPGLLLSTV TLEALGLDIQHCV+S FNDFA
Subjt:  DYVKELLEKISNLQREIEVGNPNPSKLGSSSSVGILRDVKPNDYLVRNSPKFNVERRDMDTRIEVCCAPKPGLLLSTVHTLEALGLDIQHCVISSFNDFA

Query:  IQASCSE
        IQASCSE
Subjt:  IQASCSE

XP_022146467.1 transcription factor bHLH93-like [Momordica charantia]9.7e-166100Show/hide
Query:  LMMNEQYLLDEVAALRREMNWELALPTEISGWNTNNLVPDSASATSFCLPPLDDVHNNNVNSYLLSSDDLIPFHGGASILSSLEGCDNGEYYPIANMEEE
        LMMNEQYLLDEVAALRREMNWELALPTEISGWNTNNLVPDSASATSFCLPPLDDVHNNNVNSYLLSSDDLIPFHGGASILSSLEGCDNGEYYPIANMEEE
Subjt:  LMMNEQYLLDEVAALRREMNWELALPTEISGWNTNNLVPDSASATSFCLPPLDDVHNNNVNSYLLSSDDLIPFHGGASILSSLEGCDNGEYYPIANMEEE

Query:  ELGILEDEIHNLEVQASCCKAEPVAVVQSPEAVPTFSAGACAHKSSKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYVKEL
        ELGILEDEIHNLEVQASCCKAEPVAVVQSPEAVPTFSAGACAHKSSKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYVKEL
Subjt:  ELGILEDEIHNLEVQASCCKAEPVAVVQSPEAVPTFSAGACAHKSSKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYVKEL

Query:  LEKISNLQREIEVGNPNPSKLGSSSSVGILRDVKPNDYLVRNSPKFNVERRDMDTRIEVCCAPKPGLLLSTVHTLEALGLDIQHCVISSFNDFAIQASCS
        LEKISNLQREIEVGNPNPSKLGSSSSVGILRDVKPNDYLVRNSPKFNVERRDMDTRIEVCCAPKPGLLLSTVHTLEALGLDIQHCVISSFNDFAIQASCS
Subjt:  LEKISNLQREIEVGNPNPSKLGSSSSVGILRDVKPNDYLVRNSPKFNVERRDMDTRIEVCCAPKPGLLLSTVHTLEALGLDIQHCVISSFNDFAIQASCS

Query:  E
        E
Subjt:  E

XP_022935906.1 transcription factor bHLH93-like [Cucurbita moschata]7.8e-8362.83Show/hide
Query:  MNEQYLLDEVAALRREMNWELALPTEISGWNTNNLVPDSASATSFCLPPLDDVHNNNVNSYLLSSDDLIPFHGGASILSSLE-GCDNGEYYPIANMEEEE
        +N+ YL +E+ AL+RE++WE A+PT+I+ WN +    DS +     L  L     N    Y   +D        AS   S+     NGE YPI NMEEEE
Subjt:  MNEQYLLDEVAALRREMNWELALPTEISGWNTNNLVPDSASATSFCLPPLDDVHNNNVNSYLLSSDDLIPFHGGASILSSLE-GCDNGEYYPIANMEEEE

Query:  LGILEDEIHNLEVQASCCKAEPVAVVQSPEAVPTFSAGACAHK----SSKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYV
        LGILEDEIHNLEVQA+C     V  VQSPE +   +AG    K    + KKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAI+YV
Subjt:  LGILEDEIHNLEVQASCCKAEPVAVVQSPEAVPTFSAGACAHK----SSKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYV

Query:  KELLEKISNLQREIEVGNPNPSKLGSSSSVGILRDVKPNDYLVRNSPKFNVERRDMDTRIEVCCAPKPGLLLSTVHTLEALGLDIQHCVISSFNDFAIQA
        KEL+EKI+NLQREIE GN +P+KL      GILRD+K N+YLVRNS KFNVERR+  T IE+CCA KPGLLLSTV TLEALGLDIQHCV+S FNDFA+QA
Subjt:  KELLEKISNLQREIEVGNPNPSKLGSSSSVGILRDVKPNDYLVRNSPKFNVERRDMDTRIEVCCAPKPGLLLSTVHTLEALGLDIQHCVISSFNDFAIQA

Query:  SCSE
        SCSE
Subjt:  SCSE

XP_022975802.1 transcription factor bHLH93-like [Cucurbita maxima]2.1e-8363.04Show/hide
Query:  MNEQYLLDEVAALRREMNWELALPTEISGWNTNNLVPDSASATSFCLPPLDDVHNNNVNSYLLSSDDLIPFHGGASILSSLEGCDNGEYYPIANMEEEEL
        +NE YL +E+ AL+RE+NWE A+PT+I+GWN +    DS +     L  L     N    Y   +D        ++  S      NGE YPI NMEEEEL
Subjt:  MNEQYLLDEVAALRREMNWELALPTEISGWNTNNLVPDSASATSFCLPPLDDVHNNNVNSYLLSSDDLIPFHGGASILSSLEGCDNGEYYPIANMEEEEL

Query:  GILEDEIHNLEVQASCCKAEPVAVVQSPEAVPTFSAGACAHK----SSKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYVK
        GILEDEIHNLEVQA+C     V  VQSPE +   +AG    K    + KKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAI+YVK
Subjt:  GILEDEIHNLEVQASCCKAEPVAVVQSPEAVPTFSAGACAHK----SSKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYVK

Query:  ELLEKISNLQREIEVGNPNPSKLGSSSSVGILRDVKPNDYLVRNSPKFNVERRDMDTRIEVCCAPKPGLLLSTVHTLEALGLDIQHCVISSFNDFAIQAS
        EL+EKI NLQ EIE GN +P+KL      GILRD+K N+Y VRNS KFNVERR+ +T IE+CCA KPGLLLSTV TLEALGLDIQHCV+S FNDFAIQAS
Subjt:  ELLEKISNLQREIEVGNPNPSKLGSSSSVGILRDVKPNDYLVRNSPKFNVERRDMDTRIEVCCAPKPGLLLSTVHTLEALGLDIQHCVISSFNDFAIQAS

Query:  CSE
        CSE
Subjt:  CSE

XP_038899495.1 transcription factor bHLH93-like [Benincasa hispida]2.2e-8563.61Show/hide
Query:  MNEQY-LLDEVAALRREMNWELALPTEISGWNTNNLVPDSASATSF-CLPPLD-DVHNNNVNSYLLSSDD--LIPFHGGAS----ILSSLE------GCD
        MNEQY LL+EV  LRREMNWELA+ TE+     N L+ ++A+  +F C   L  D HN N   YLL+  D   +P   G+S      S+LE         
Subjt:  MNEQY-LLDEVAALRREMNWELALPTEISGWNTNNLVPDSASATSF-CLPPLD-DVHNNNVNSYLLSSDD--LIPFHGGAS----ILSSLE------GCD

Query:  NGEYYPIANMEEEELGILEDEIHNLEVQA-SCCKAEPVAVVQSPEAV-PTFSA----------GACAHKSSKKLQGQPSKNLMAERRRRKRLNDRLSMLR
        NGE YPI +MEEEELGILEDEIHNLEVQA S CKAE  ++V+SPE + P F+               +  +KKLQGQPSKNLMAERRRRKRLNDRLSMLR
Subjt:  NGEYYPIANMEEEELGILEDEIHNLEVQA-SCCKAEPVAVVQSPEAV-PTFSA----------GACAHKSSKKLQGQPSKNLMAERRRRKRLNDRLSMLR

Query:  SIVPKISKMDRTAILADAIDYVKELLEKISNLQREIEVGNPNPSKLGSSSSVGILRDVKP-NDYLVRNSPKFNVERRDMDTRIEVCCAPKPGLLLSTVHT
        SIVPKISKMDRTAILADAI+YVKEL+EKI NL+REI VGN N +   + + +GILRDVKP N+YLVRNSPKFNVERR+ DTRIE+CCA KPGLLLSTV+T
Subjt:  SIVPKISKMDRTAILADAIDYVKELLEKISNLQREIEVGNPNPSKLGSSSSVGILRDVKP-NDYLVRNSPKFNVERRDMDTRIEVCCAPKPGLLLSTVHT

Query:  LEALGLDIQHCVISSFNDFAIQASCSE
        LE LGLDIQ CVIS FNDFAIQASCSE
Subjt:  LEALGLDIQHCVISSFNDFAIQASCSE

TrEMBL top hitse value%identityAlignment
A0A0A0LGY7 BHLH domain-containing protein1.9e-7959.19Show/hide
Query:  MNEQYLLDEVAALRRE--MNWELALPTEISGWNTNNLVPDSASATSFCLPPLDDVHNNNVNSYLLSSDDLIPFHGGA-------------SILSSLEGCD
        +NE YLL+EV  LRR   MNWELA+ TE++GWN +    DS         P+D  HN+   +YLL+ +D       A             S ++   G  
Subjt:  MNEQYLLDEVAALRRE--MNWELALPTEISGWNTNNLVPDSASATSFCLPPLDDVHNNNVNSYLLSSDDLIPFHGGA-------------SILSSLEGCD

Query:  NGEYYPIANMEEEELGILEDEIHNLEVQAS----CCKAEPVAVVQSP-EAVPTFSAGACAHKSSKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKIS
        + E Y I +MEEEELGILEDEIHNLEVQA+     CK EPV V QSP + +P F  G      SKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKIS
Subjt:  NGEYYPIANMEEEELGILEDEIHNLEVQAS----CCKAEPVAVVQSP-EAVPTFSAGACAHKSSKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKIS

Query:  KMDRTAILADAIDYVKELLEKISNLQREIEVGNPNPSKLGSSSSVGILRD--VKP-NDYLVRNSPKFNVERRDMDTRIEVCCAPKPGLLLSTVHTLEALG
        KMDRTAILADAI+YVKEL+E+I  L++EI           +S+ +GILR   VKP N+YLVRNS KFNVERR+ +T+IE+CCA KPGLLLSTV+TLEA+G
Subjt:  KMDRTAILADAIDYVKELLEKISNLQREIEVGNPNPSKLGSSSSVGILRD--VKP-NDYLVRNSPKFNVERRDMDTRIEVCCAPKPGLLLSTVHTLEALG

Query:  LDIQHCVISSFNDFAIQASCS
        LDIQHCVIS FNDFAIQASCS
Subjt:  LDIQHCVISSFNDFAIQASCS

A0A1S3CRW4 transcription factor bHLH61-like5.1e-8059.15Show/hide
Query:  MNEQYLLDEVAALRR-EMNWELALPTEISGWNTNNLVPDSASATSFCLPPLDDVHNNNVNSYLLSSDD--------LIPFHGGA-----SILSSLEGCDN
        +NE YLL+EV  LRR EMNWELA+ TE++GWN +          S  L P+D  HN+++N YLL+ +D        +    GG+     S  + +E   +
Subjt:  MNEQYLLDEVAALRR-EMNWELALPTEISGWNTNNLVPDSASATSFCLPPLDDVHNNNVNSYLLSSDD--------LIPFHGGA-----SILSSLEGCDN

Query:  GEYYPIANMEEEELGILEDEIHNLEVQAS----CCKAEPVAVVQSPE-AVPTFS--AGACAHK-------SSKKLQGQPSKNLMAERRRRKRLNDRLSML
         E Y I +MEEEELGILEDEIHNLEVQA+     CK EP+ VV+SPE  +P F+   G C  +         KKLQGQPSKNLMAERRRRKRLNDRLSML
Subjt:  GEYYPIANMEEEELGILEDEIHNLEVQAS----CCKAEPVAVVQSPE-AVPTFS--AGACAHK-------SSKKLQGQPSKNLMAERRRRKRLNDRLSML

Query:  RSIVPKISKMDRTAILADAIDYVKELLEKISNLQREIEVGNPNPSKLGSSSSVGILRDVKP-NDYLVRNSPKFNVERRDMDTRIEVCCAPKPGLLLSTVH
        RSIVPKISKMDRTAILADAI+YVKEL+EKI  L++EI +    P++LG   S  I   VKP N+YLVRNS KFNVERR+ +T+IE+CCA KPGLLLSTV+
Subjt:  RSIVPKISKMDRTAILADAIDYVKELLEKISNLQREIEVGNPNPSKLGSSSSVGILRDVKP-NDYLVRNSPKFNVERRDMDTRIEVCCAPKPGLLLSTVH

Query:  TLEALGLDIQHCVISSFNDFAIQASCSE
        TLEA+GLDIQHCVIS FNDFAIQASCS+
Subjt:  TLEALGLDIQHCVISSFNDFAIQASCSE

A0A6J1CZN2 transcription factor bHLH93-like4.7e-166100Show/hide
Query:  LMMNEQYLLDEVAALRREMNWELALPTEISGWNTNNLVPDSASATSFCLPPLDDVHNNNVNSYLLSSDDLIPFHGGASILSSLEGCDNGEYYPIANMEEE
        LMMNEQYLLDEVAALRREMNWELALPTEISGWNTNNLVPDSASATSFCLPPLDDVHNNNVNSYLLSSDDLIPFHGGASILSSLEGCDNGEYYPIANMEEE
Subjt:  LMMNEQYLLDEVAALRREMNWELALPTEISGWNTNNLVPDSASATSFCLPPLDDVHNNNVNSYLLSSDDLIPFHGGASILSSLEGCDNGEYYPIANMEEE

Query:  ELGILEDEIHNLEVQASCCKAEPVAVVQSPEAVPTFSAGACAHKSSKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYVKEL
        ELGILEDEIHNLEVQASCCKAEPVAVVQSPEAVPTFSAGACAHKSSKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYVKEL
Subjt:  ELGILEDEIHNLEVQASCCKAEPVAVVQSPEAVPTFSAGACAHKSSKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYVKEL

Query:  LEKISNLQREIEVGNPNPSKLGSSSSVGILRDVKPNDYLVRNSPKFNVERRDMDTRIEVCCAPKPGLLLSTVHTLEALGLDIQHCVISSFNDFAIQASCS
        LEKISNLQREIEVGNPNPSKLGSSSSVGILRDVKPNDYLVRNSPKFNVERRDMDTRIEVCCAPKPGLLLSTVHTLEALGLDIQHCVISSFNDFAIQASCS
Subjt:  LEKISNLQREIEVGNPNPSKLGSSSSVGILRDVKPNDYLVRNSPKFNVERRDMDTRIEVCCAPKPGLLLSTVHTLEALGLDIQHCVISSFNDFAIQASCS

Query:  E
        E
Subjt:  E

A0A6J1F615 transcription factor bHLH93-like3.8e-8362.83Show/hide
Query:  MNEQYLLDEVAALRREMNWELALPTEISGWNTNNLVPDSASATSFCLPPLDDVHNNNVNSYLLSSDDLIPFHGGASILSSLE-GCDNGEYYPIANMEEEE
        +N+ YL +E+ AL+RE++WE A+PT+I+ WN +    DS +     L  L     N    Y   +D        AS   S+     NGE YPI NMEEEE
Subjt:  MNEQYLLDEVAALRREMNWELALPTEISGWNTNNLVPDSASATSFCLPPLDDVHNNNVNSYLLSSDDLIPFHGGASILSSLE-GCDNGEYYPIANMEEEE

Query:  LGILEDEIHNLEVQASCCKAEPVAVVQSPEAVPTFSAGACAHK----SSKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYV
        LGILEDEIHNLEVQA+C     V  VQSPE +   +AG    K    + KKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAI+YV
Subjt:  LGILEDEIHNLEVQASCCKAEPVAVVQSPEAVPTFSAGACAHK----SSKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYV

Query:  KELLEKISNLQREIEVGNPNPSKLGSSSSVGILRDVKPNDYLVRNSPKFNVERRDMDTRIEVCCAPKPGLLLSTVHTLEALGLDIQHCVISSFNDFAIQA
        KEL+EKI+NLQREIE GN +P+KL      GILRD+K N+YLVRNS KFNVERR+  T IE+CCA KPGLLLSTV TLEALGLDIQHCV+S FNDFA+QA
Subjt:  KELLEKISNLQREIEVGNPNPSKLGSSSSVGILRDVKPNDYLVRNSPKFNVERRDMDTRIEVCCAPKPGLLLSTVHTLEALGLDIQHCVISSFNDFAIQA

Query:  SCSE
        SCSE
Subjt:  SCSE

A0A6J1IE22 transcription factor bHLH93-like1.0e-8363.04Show/hide
Query:  MNEQYLLDEVAALRREMNWELALPTEISGWNTNNLVPDSASATSFCLPPLDDVHNNNVNSYLLSSDDLIPFHGGASILSSLEGCDNGEYYPIANMEEEEL
        +NE YL +E+ AL+RE+NWE A+PT+I+GWN +    DS +     L  L     N    Y   +D        ++  S      NGE YPI NMEEEEL
Subjt:  MNEQYLLDEVAALRREMNWELALPTEISGWNTNNLVPDSASATSFCLPPLDDVHNNNVNSYLLSSDDLIPFHGGASILSSLEGCDNGEYYPIANMEEEEL

Query:  GILEDEIHNLEVQASCCKAEPVAVVQSPEAVPTFSAGACAHK----SSKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYVK
        GILEDEIHNLEVQA+C     V  VQSPE +   +AG    K    + KKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAI+YVK
Subjt:  GILEDEIHNLEVQASCCKAEPVAVVQSPEAVPTFSAGACAHK----SSKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYVK

Query:  ELLEKISNLQREIEVGNPNPSKLGSSSSVGILRDVKPNDYLVRNSPKFNVERRDMDTRIEVCCAPKPGLLLSTVHTLEALGLDIQHCVISSFNDFAIQAS
        EL+EKI NLQ EIE GN +P+KL      GILRD+K N+Y VRNS KFNVERR+ +T IE+CCA KPGLLLSTV TLEALGLDIQHCV+S FNDFAIQAS
Subjt:  ELLEKISNLQREIEVGNPNPSKLGSSSSVGILRDVKPNDYLVRNSPKFNVERRDMDTRIEVCCAPKPGLLLSTVHTLEALGLDIQHCVISSFNDFAIQAS

Query:  CSE
        CSE
Subjt:  CSE

SwissProt top hitse value%identityAlignment
Q10S44 Transcription factor BHLH35.3e-4256.28Show/hide
Query:  PTFSAGACAHKSSK----------------KLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYVKELLEKISNLQREIEVGNPN
        PTF  G  A +SS+                KL G PSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRT+IL D IDYVKEL E+I  L+ EI V    
Subjt:  PTFSAGACAHKSSK----------------KLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYVKELLEKISNLQREIEVGNPN

Query:  PSKLGSSSSVGILRDVKPNDYLVRNSPKFNVERRDM-DTRIEVCCAPKPGLLLSTVHTLEALGLDIQHCVISSFNDFAIQASC
        P +L   +++        N+ LVRNS KF+VE R   +TRIE+CC   PG+LLSTV  LE LGL+I+ CV+S F+DF +QASC
Subjt:  PSKLGSSSSVGILRDVKPNDYLVRNSPKFNVERRDM-DTRIEVCCAPKPGLLLSTVHTLEALGLDIQHCVISSFNDFAIQASC

Q336V8 Basic helix-loop-helix protein 0042.3e-3758.23Show/hide
Query:  GQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYVKELLEKISNLQREIEVGNPNPSKLGSSSSVGILRDVKP--------NDYLVRN
        G PSKNLMAERRRRKRLNDRLSMLRS+VP+ISKMDRT+IL D I YVKEL+++I NLQ E   G+ + S   + S +  L  +KP           L+RN
Subjt:  GQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYVKELLEKISNLQREIEVGNPNPSKLGSSSSVGILRDVKP--------NDYLVRN

Query:  SPKFNVERRDM-DTRIEVCCAPKPGLLLSTVHTLEALGLDIQHCVISSFNDFAIQASC
        S +F VERR+   TRIE+ CA  P LL ST+  LEALG++I+ CVIS F+DFA+QASC
Subjt:  SPKFNVERRDM-DTRIEVCCAPKPGLLLSTVHTLEALGLDIQHCVISSFNDFAIQASC

Q9LPW3 Transcription factor SCREAM21.4e-2948.17Show/hide
Query:  KLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYVKELLEKISNLQREIEVGNPNPSKL------GSSSSVGILRDVKPNDYLVR
        K +G P+KNLMAERRRRK+LNDRL MLRS+VPKISKMDR +IL DAIDY+KELL++I++L  E+E   P+ S L        + S  +  ++ P+  L  
Subjt:  KLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYVKELLEKISNLQREIEVGNPNPSKL------GSSSSVGILRDVKPNDYLVR

Query:  ---NSPKFNVERRD-MDTRIEVCCAPKPGLLLSTVHTLEALGLDIQHCVISSFNDFAIQASCSE
             P+  V  R+     I + C  +PGLLLST+  L+ LGLD+Q  VIS FN FA+    +E
Subjt:  ---NSPKFNVERRD-MDTRIEVCCAPKPGLLLSTVHTLEALGLDIQHCVISSFNDFAIQASCSE

Q9LSL1 Transcription factor bHLH936.5e-5665.22Show/hide
Query:  PVAVVQSPEAVPTFSAGACA----HKSSKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYVKELLEKISNLQ-REIEVGNPN
        P  +++S ++  +FS G C      K SKKL+GQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRT+IL DAIDY+KELL+KI+ LQ  E E+GN N
Subjt:  PVAVVQSPEAVPTFSAGACA----HKSSKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYVKELLEKISNLQ-REIEVGNPN

Query:  PSKLGSSSSVGILRDVKPNDYLVRNSPKFNVERRDMDTRIEVCCAPKPGLLLSTVHTLEALGLDIQHCVISSFNDFAIQASCSE
         S    S   G L+D+  N+ LVRNSPKF ++RRD DTR+++CC+PKPGLLLSTV+TLE LGL+I+ CVIS F+DF++QASCSE
Subjt:  PSKLGSSSSVGILRDVKPNDYLVRNSPKFNVERRDMDTRIEVCCAPKPGLLLSTVHTLEALGLDIQHCVISSFNDFAIQASCSE

Q9LXA9 Transcription factor bHLH611.0e-4562.03Show/hide
Query:  KSSKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYVKELLEKISNLQREIEVGNPNPSKLGSSSSVGILRDVKPNDYLVRNS
        +S+KKL+GQPSKNLMAERRRRKRLNDRLS+LRSIVPKI+KMDRT+IL DAIDY+KELL+KI+ LQ +         +LGS+S +  L     N+ +VRNS
Subjt:  KSSKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYVKELLEKISNLQREIEVGNPNPSKLGSSSSVGILRDVKPNDYLVRNS

Query:  PKFNVERRDMDTRIEVCCAPKPGLLLSTVHTLEALGLDIQHCVISSFNDFAIQASCSE
         KF V++R+++T I++CC  KPGL++STV TLE LGL+I+ CVIS F+DF++QASC E
Subjt:  PKFNVERRDMDTRIEVCCAPKPGLLLSTVHTLEALGLDIQHCVISSFNDFAIQASCSE

Arabidopsis top hitse value%identityAlignment
AT1G12860.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein9.7e-3148.17Show/hide
Query:  KLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYVKELLEKISNLQREIEVGNPNPSKL------GSSSSVGILRDVKPNDYLVR
        K +G P+KNLMAERRRRK+LNDRL MLRS+VPKISKMDR +IL DAIDY+KELL++I++L  E+E   P+ S L        + S  +  ++ P+  L  
Subjt:  KLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYVKELLEKISNLQREIEVGNPNPSKL------GSSSSVGILRDVKPNDYLVR

Query:  ---NSPKFNVERRD-MDTRIEVCCAPKPGLLLSTVHTLEALGLDIQHCVISSFNDFAIQASCSE
             P+  V  R+     I + C  +PGLLLST+  L+ LGLD+Q  VIS FN FA+    +E
Subjt:  ---NSPKFNVERRD-MDTRIEVCCAPKPGLLLSTVHTLEALGLDIQHCVISSFNDFAIQASCSE

AT3G26744.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.4e-2947.02Show/hide
Query:  KLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYVKELLEKISNLQREIEVGNPNPSKLGSSS-----------SVGILRDVKPN
        K +G P+KNLMAERRRRK+LNDRL MLRS+VPKISKMDR +IL DAIDY+KELL++I++L  E+E   P      SSS           S  +  ++ P+
Subjt:  KLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYVKELLEKISNLQREIEVGNPNPSKLGSSS-----------SVGILRDVKPN

Query:  DYLVRNSPKFNVERRDMDTR---IEVCCAPKPGLLLSTVHTLEALGLDIQHCVISSFNDFAIQASCSE
                +  VE R  + R   I + C  +PGLLL+T+  L+ LGLD+Q  VIS FN FA+    +E
Subjt:  DYLVRNSPKFNVERRDMDTR---IEVCCAPKPGLLLSTVHTLEALGLDIQHCVISSFNDFAIQASCSE

AT5G10570.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein7.4e-4762.03Show/hide
Query:  KSSKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYVKELLEKISNLQREIEVGNPNPSKLGSSSSVGILRDVKPNDYLVRNS
        +S+KKL+GQPSKNLMAERRRRKRLNDRLS+LRSIVPKI+KMDRT+IL DAIDY+KELL+KI+ LQ +         +LGS+S +  L     N+ +VRNS
Subjt:  KSSKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYVKELLEKISNLQREIEVGNPNPSKLGSSSSVGILRDVKPNDYLVRNS

Query:  PKFNVERRDMDTRIEVCCAPKPGLLLSTVHTLEALGLDIQHCVISSFNDFAIQASCSE
         KF V++R+++T I++CC  KPGL++STV TLE LGL+I+ CVIS F+DF++QASC E
Subjt:  PKFNVERRDMDTRIEVCCAPKPGLLLSTVHTLEALGLDIQHCVISSFNDFAIQASCSE

AT5G65640.1 beta HLH protein 934.6e-5765.22Show/hide
Query:  PVAVVQSPEAVPTFSAGACA----HKSSKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYVKELLEKISNLQ-REIEVGNPN
        P  +++S ++  +FS G C      K SKKL+GQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRT+IL DAIDY+KELL+KI+ LQ  E E+GN N
Subjt:  PVAVVQSPEAVPTFSAGACA----HKSSKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYVKELLEKISNLQ-REIEVGNPN

Query:  PSKLGSSSSVGILRDVKPNDYLVRNSPKFNVERRDMDTRIEVCCAPKPGLLLSTVHTLEALGLDIQHCVISSFNDFAIQASCSE
         S    S   G L+D+  N+ LVRNSPKF ++RRD DTR+++CC+PKPGLLLSTV+TLE LGL+I+ CVIS F+DF++QASCSE
Subjt:  PSKLGSSSSVGILRDVKPNDYLVRNSPKFNVERRDMDTRIEVCCAPKPGLLLSTVHTLEALGLDIQHCVISSFNDFAIQASCSE

AT5G65640.2 beta HLH protein 939.7e-3161.31Show/hide
Query:  PVAVVQSPEAVPTFSAGACA----HKSSKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYVKELLEKISNLQ-REIEVGNPN
        P  +++S ++  +FS G C      K SKKL+GQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRT+IL DAIDY+KELL+KI+ LQ  E E+GN N
Subjt:  PVAVVQSPEAVPTFSAGACA----HKSSKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYVKELLEKISNLQ-REIEVGNPN

Query:  PSKLGSSSSVGILRDVKPNDYLVRNSPKFNVERRDMD
         S    S   G L+D+  N+ LVRNSPK  VE R ++
Subjt:  PSKLGSSSSVGILRDVKPNDYLVRNSPKFNVERRDMD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTGATGATGAACGAACAATATTTGTTAGACGAAGTTGCAGCTCTTAGAAGAGAGATGAATTGGGAATTGGCGCTGCCCACAGAAATTAGTGGGTGGAATACTAACAATTT
GGTTCCAGATTCTGCCTCTGCCACCAGCTTCTGTTTGCCGCCGCTGGACGACGTGCACAATAACAATGTTAACAGCTACCTCCTCAGTAGTGACGATTTGATTCCTTTTC
ACGGCGGCGCGTCGATTTTGTCGTCGCTGGAGGGTTGTGATAACGGGGAGTATTATCCGATCGCGAACATGGAGGAGGAGGAGCTCGGGATTTTGGAGGACGAGATTCAT
AACCTTGAAGTTCAGGCAAGTTGTTGTAAGGCTGAGCCCGTTGCCGTGGTTCAGTCTCCTGAAGCCGTCCCCACTTTCAGCGCCGGCGCGTGCGCCCACAAGAGTAGTAA
GAAATTGCAAGGCCAGCCGTCGAAGAATCTGATGGCGGAGAGGCGCCGGAGGAAGCGCCTCAACGATCGCCTCTCCATGCTCCGATCCATCGTCCCCAAAATAAGCAAGA
TGGACAGAACTGCGATTCTGGCGGATGCTATAGATTACGTGAAGGAATTACTTGAGAAAATCAGCAATTTGCAGAGGGAAATTGAGGTGGGGAATCCAAATCCGAGCAAG
TTGGGGAGTAGTAGTAGTGTGGGCATTTTGAGAGATGTGAAACCGAATGATTATTTGGTCAGAAATTCGCCCAAGTTTAATGTGGAAAGGAGAGACATGGACACTCGGAT
TGAGGTTTGCTGTGCGCCAAAGCCTGGGTTGTTGTTGTCTACAGTACATACTCTTGAAGCATTGGGGCTTGACATTCAACACTGTGTCATCAGCTCTTTCAATGATTTTG
CTATTCAAGCTTCTTGCTCTGAG
mRNA sequenceShow/hide mRNA sequence
CTGATGATGAACGAACAATATTTGTTAGACGAAGTTGCAGCTCTTAGAAGAGAGATGAATTGGGAATTGGCGCTGCCCACAGAAATTAGTGGGTGGAATACTAACAATTT
GGTTCCAGATTCTGCCTCTGCCACCAGCTTCTGTTTGCCGCCGCTGGACGACGTGCACAATAACAATGTTAACAGCTACCTCCTCAGTAGTGACGATTTGATTCCTTTTC
ACGGCGGCGCGTCGATTTTGTCGTCGCTGGAGGGTTGTGATAACGGGGAGTATTATCCGATCGCGAACATGGAGGAGGAGGAGCTCGGGATTTTGGAGGACGAGATTCAT
AACCTTGAAGTTCAGGCAAGTTGTTGTAAGGCTGAGCCCGTTGCCGTGGTTCAGTCTCCTGAAGCCGTCCCCACTTTCAGCGCCGGCGCGTGCGCCCACAAGAGTAGTAA
GAAATTGCAAGGCCAGCCGTCGAAGAATCTGATGGCGGAGAGGCGCCGGAGGAAGCGCCTCAACGATCGCCTCTCCATGCTCCGATCCATCGTCCCCAAAATAAGCAAGA
TGGACAGAACTGCGATTCTGGCGGATGCTATAGATTACGTGAAGGAATTACTTGAGAAAATCAGCAATTTGCAGAGGGAAATTGAGGTGGGGAATCCAAATCCGAGCAAG
TTGGGGAGTAGTAGTAGTGTGGGCATTTTGAGAGATGTGAAACCGAATGATTATTTGGTCAGAAATTCGCCCAAGTTTAATGTGGAAAGGAGAGACATGGACACTCGGAT
TGAGGTTTGCTGTGCGCCAAAGCCTGGGTTGTTGTTGTCTACAGTACATACTCTTGAAGCATTGGGGCTTGACATTCAACACTGTGTCATCAGCTCTTTCAATGATTTTG
CTATTCAAGCTTCTTGCTCTGAG
Protein sequenceShow/hide protein sequence
LMMNEQYLLDEVAALRREMNWELALPTEISGWNTNNLVPDSASATSFCLPPLDDVHNNNVNSYLLSSDDLIPFHGGASILSSLEGCDNGEYYPIANMEEEELGILEDEIH
NLEVQASCCKAEPVAVVQSPEAVPTFSAGACAHKSSKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYVKELLEKISNLQREIEVGNPNPSK
LGSSSSVGILRDVKPNDYLVRNSPKFNVERRDMDTRIEVCCAPKPGLLLSTVHTLEALGLDIQHCVISSFNDFAIQASCSE