CuGenDBv2

Gene ID	MS008336
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Rhamnogalacturonan endolyase
Genome location	scaffold4:619994..625171
RNA-Seq Expression	MS008336
Synteny	MS008336
Gene Ontology terms	GO:0005975 - carbohydrate metabolic process (biological process) GO:0005576 - extracellular region (cellular component) GO:0030246 - carbohydrate binding (molecular function) GO:0102210 - rhamnogalacturonan endolyase activity (molecular function)
InterPro domains	IPR008979 - Galactose-binding-like domain superfamily IPR010325 - Rhamnogalacturonate lyase IPR011013 - Galactose mutarotase-like domain superfamily IPR013784 - Carbohydrate-binding-like fold IPR014718 - Glycoside hydrolase-type carbohydrate-binding IPR029411 - Rhamnogalacturonan lyase, domain III IPR029413 - Rhamnogalacturonan lyase, domain II

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6608124.1 hypothetical protein SDJN03_01466, partial [Cucurbita argyrosperma subsp. sororia]

0.0e+00

89.64

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Query:  QVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEEQVELSFMRMWEPSLEGKFVPLNIDKRF
        +VVVDNGILQLTLSKPDGI+TGIRYNGVDNLLEVLNPE NRGYWD+VWNSPGS+GIFDVIKGSSFRV+VENEEQVELSF RMW+PSLEGK VPLNIDKRF
Subjt:  QVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEEQVELSFMRMWEPSLEGKFVPLNIDKRF

Query:  IVLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDDKYQYSCESKDL
        IVLRGSSGFYSYAIYEHLKDWPDFD+GETRITFKLRKDKFQYMAVADNRQR MPLPDDRLSGRCQTL +PEAVLLT+PKNP+ K EVDDKYQYSCE+KDL
Subjt:  IVLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDDKYQYSCESKDL

Query:  KVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFWLWEDAKIQMMTEV
        KVHGWI TNPP GFWQITPSDEFRSGGP KQSLTSHVGPTTLAIFLS HYAGQDLVPKFR GEPWKKVFGPVFLY NST  GDDPFWLWEDAKIQMMTEV
Subjt:  KVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFWLWEDAKIQMMTEV

Query:  QSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRC
        QSWPYSFPAS+DFPK+DQRGT+SGRLLVFDRY+S+DYLPA GAFVGLSAPGE+GSWQRECKGYQFWTRADD GYF INH+H G YNLYAWV GFIGDYRC
Subjt:  QSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRC

Query:  DALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPR
        DALINI+QGS IE+GDLVYEPPRDGPTLWEIGIPDRSASEFY PDPNP+HIN L VNHP+RFRQYGLW+RYAELYPDEDLVYTVGTSDYSKDWFFAQVPR
Subjt:  DALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPR

Query:  KTNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIFLTQPR
        KTN N+HQGTTW+I FKLD VD K+ YMLRVAIASATLAELQ+R+NDP SKRPLFTSGLIGRDNSIARHGIHG+YWLYSVGIAG HLVEGDN IF TQPR
Subjt:  KTNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIFLTQPR

Query:  CTSPFQGIMYDYIRLEGP
        CTSPFQGIMYDYIRLE P
Subjt:  CTSPFQGIMYDYIRLEGP

XP_004136250.1 probable rhamnogalacturonate lyase B isoform X1 [Cucumis sativus]

0.0e+00

92.07

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Query:  VVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEEQVELSFMRMWEPSLEGKFVPLNIDKRFI
        VVVDNGILQLTLSKPDGI+TG+RYNGVDNLLEVLNPE NRGYWDLVWNSPGSKG+FDVIKGS FRV+VENEEQVELSF+RMW+PSLEGKFVPLNIDKRFI
Subjt:  VVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEEQVELSFMRMWEPSLEGKFVPLNIDKRFI

Query:  VLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDDKYQYSCESKDLK
        VLRGSSGFYSYAIYEHLKDWPDFD+GETRITFKLRKDKFQYMAVADNRQR MPLPDDRLSGRCQTLAYPEAVLLTNPKNP LKGEVDDKYQYSCE+ +LK
Subjt:  VLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDDKYQYSCESKDLK

Query:  VHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFWLWEDAKIQMMTEVQ
        VHGWI TNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLS HYAGQDLVPKFRAGEPWKKVFGPVFLY NSTSVGDDPFWLWEDAKIQMM EV 
Subjt:  VHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFWLWEDAKIQMMTEVQ

Query:  SWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCD
        SWPYSFPASEDFPK DQRG VSGRLLVFDRYV QDYLPA GAFVGLSAPGE GSWQRECKGYQFWTRADDGGYFTINH+H G+YNLYAWV GFIGDYRCD
Subjt:  SWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCD

Query:  ALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPRK
        ALIN++QGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFY PDPNPIHIN LFV+HPDRFRQYGLW+RYAELYP+EDLVYTVGTSDY KDWFFA VPRK
Subjt:  ALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPRK

Query:  TNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIFLTQPRC
        TN N+H+GTTWQIKFKLD VDHKSMY LRVAIASATLAELQVR+NDPRSKRPLFTSGLIGRDNSIARHGIHG+YW+Y VG+AG HLVEG+NTIFLTQPRC
Subjt:  TNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIFLTQPRC

Query:  TSPFQGIMYDYIRLEGPP
        TSPFQGIMYDYIRLEGPP
Subjt:  TSPFQGIMYDYIRLEGPP

XP_008466137.1 PREDICTED: probable rhamnogalacturonate lyase B isoform X1 [Cucumis melo]

0.0e+00

92.23

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Query:  VVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEEQVELSFMRMWEPSLEGKFVPLNIDKRFI
        VVVDNGILQLTLSKPDGI+TGIRYNGVDNLLEVLNPE NRGYWDLVWNSPGSKGIFDVIKGS F V+VENEEQVELSF+RMW+PSLEGKFVPLNIDKRFI
Subjt:  VVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEEQVELSFMRMWEPSLEGKFVPLNIDKRFI

Query:  VLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDDKYQYSCESKDLK
        VLRGSSGFYSYAIYEHLKDWPDFD+GETRITFKLRKDKFQYMAVADNRQR MPLPDDRLSGRCQTLAYPEAVLLT+PKN  LKGEVDDKYQYSCE+ +LK
Subjt:  VLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDDKYQYSCESKDLK

Query:  VHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFWLWEDAKIQMMTEVQ
        VHGWI TNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLY NSTSVGDDPFWLWEDAKIQMM EV+
Subjt:  VHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFWLWEDAKIQMMTEVQ

Query:  SWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCD
        SWPYSFPASEDF K DQRG VSGRLLVFDRYV QDYLP SGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINH+  GDYNLYAWV GFIGDYRCD
Subjt:  SWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCD

Query:  ALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPRK
        AL+N++QGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFY PDPNPI+IN LFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDY KDWFFA VPRK
Subjt:  ALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPRK

Query:  TNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIFLTQPRC
        TNSN+H+GTTWQIKF+LD VD KSMYMLRVAIASATLAELQVR+NDPRSKRPLFTSGLIGRDNSIARHGIHG+YW+YSV +AG HLVEG+NTIFLTQPRC
Subjt:  TNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIFLTQPRC

Query:  TSPFQGIMYDYIRLEGPP
        TSPFQGIMYDYIRLEGPP
Subjt:  TSPFQGIMYDYIRLEGPP

XP_022940913.1 probable rhamnogalacturonate lyase B isoform X1 [Cucurbita moschata]

0.0e+00

89.79

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Query:  VVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEEQVELSFMRMWEPSLEGKFVPLNIDKRFI
        VVVDNGILQLTLSKPDGI+TGIRYNGVDNLLEVLNPE NRGYWD+VWNSPGS+GIFDVIKGSSFRV+VENEEQVELSF RMW+PSLEGK VPLNIDKRFI
Subjt:  VVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEEQVELSFMRMWEPSLEGKFVPLNIDKRFI

Query:  VLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDDKYQYSCESKDLK
        VLRGSSGFYSYAIYEHLKDWPDFD+GETRITFKLRKDKFQYMAVADNRQR MPLPDDRLSGRCQTL +PEAVLLTNPKNP+ + EVDDKYQYSC++KDLK
Subjt:  VLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDDKYQYSCESKDLK

Query:  VHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFWLWEDAKIQMMTEVQ
        VHGWI TNPP GFWQITPSDEFRSGGP KQSLTSHVGPTTLAIFLS HYAGQDLVPKFR GEPWKKVFGPVFLY NST  GDDPFWLWEDAKIQMM EVQ
Subjt:  VHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFWLWEDAKIQMMTEVQ

Query:  SWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCD
        SWPYSFPAS+DFPK+DQRGT+SGRLLVFDRY+S+DYLPA GAFVGLSAPGEVGSWQRECKGYQFWTRADD GYF INH+H G YNLYAWV GFIGDYRCD
Subjt:  SWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCD

Query:  ALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPRK
        ALINI+QGS IE+GDLVYEPPRDGPTLWEIGIPDRSASEFY PDPNP+HIN LFVNHP+RFRQYGLW+RYAELYPDEDLVYTVGTSDYSKDWFFAQVPRK
Subjt:  ALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPRK

Query:  TNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIFLTQPRC
        TN N+HQGTTW+I FKLD VD K+ YMLRVAIASATLAELQ+R+NDP SKRPLFTSGLIGRDNSIARHGIHG+YWLYSVGIAG HLVEGDN IF TQPRC
Subjt:  TNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIFLTQPRC

Query:  TSPFQGIMYDYIRLEGP
        TSPFQGIMYDYIRLE P
Subjt:  TSPFQGIMYDYIRLEGP

XP_038897922.1 probable rhamnogalacturonate lyase B [Benincasa hispida]

0.0e+00

92.88

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Query:  VVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEEQVELSFMRMWEPSLEGKFVPLNIDKRFI
        VVV+NGILQLTLSKPDGI+TGIRYNGVDNLLEVLNPE NRGYWDLVWNSPGSKGIFDVIKGSSFRV+VENEEQVELSFMRMW+PSLEGK VPLNIDKRFI
Subjt:  VVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEEQVELSFMRMWEPSLEGKFVPLNIDKRFI

Query:  VLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDDKYQYSCESKDLK
        VLRGSSGFYSYAIYEHLKDWPDFD+GETRITFKLRKDKFQYMAVADNRQ+ MPLPDDRLSGRCQTLAYPEAVLLTNPKNP+LKGEVDDKYQYSCE+KDLK
Subjt:  VLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDDKYQYSCESKDLK

Query:  VHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFWLWEDAKIQMMTEVQ
        VHGWICTNPPTGFW ITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVF Y NSTSVGDDPFWLWEDAKIQMM EV+
Subjt:  VHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFWLWEDAKIQMMTEVQ

Query:  SWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCD
        SWPYSFPASEDFPKVDQRG V GRLLV DRYVSQDYLPASGAFVG+SAPGEVGSWQRECKGYQFWTRADDGGYFTINH H GDYNLY+WV GFIGDYRCD
Subjt:  SWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCD

Query:  ALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPRK
        ALIN+NQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFY PDPNP HIN LFVNHPDRFRQYGLWDRYAELYP+EDLVYTVGTSDYSKDWFFAQVPRK
Subjt:  ALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPRK

Query:  TNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIFLTQPRC
        T SN+H+GTTWQIKF L+ V  KSMY LRVAIASATLAELQVR+NDPRSKRPLFTSGLIGRDNSIARHGIHG+YWLYSVG+ G HLVEG+NTIFLTQPRC
Subjt:  TNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIFLTQPRC

Query:  TSPFQGIMYDYIRLEGPP
        TSPFQGIMYDYIRLEGPP
Subjt:  TSPFQGIMYDYIRLEGPP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJQ9 Rhamnogalacturonan endolyase

0.0e+00

92.07

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Query:  VVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEEQVELSFMRMWEPSLEGKFVPLNIDKRFI
        VVVDNGILQLTLSKPDGI+TG+RYNGVDNLLEVLNPE NRGYWDLVWNSPGSKG+FDVIKGS FRV+VENEEQVELSF+RMW+PSLEGKFVPLNIDKRFI
Subjt:  VVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEEQVELSFMRMWEPSLEGKFVPLNIDKRFI

Query:  VLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDDKYQYSCESKDLK
        VLRGSSGFYSYAIYEHLKDWPDFD+GETRITFKLRKDKFQYMAVADNRQR MPLPDDRLSGRCQTLAYPEAVLLTNPKNP LKGEVDDKYQYSCE+ +LK
Subjt:  VLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDDKYQYSCESKDLK

Query:  VHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFWLWEDAKIQMMTEVQ
        VHGWI TNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLS HYAGQDLVPKFRAGEPWKKVFGPVFLY NSTSVGDDPFWLWEDAKIQMM EV 
Subjt:  VHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFWLWEDAKIQMMTEVQ

Query:  SWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCD
        SWPYSFPASEDFPK DQRG VSGRLLVFDRYV QDYLPA GAFVGLSAPGE GSWQRECKGYQFWTRADDGGYFTINH+H G+YNLYAWV GFIGDYRCD
Subjt:  SWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCD

Query:  ALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPRK
        ALIN++QGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFY PDPNPIHIN LFV+HPDRFRQYGLW+RYAELYP+EDLVYTVGTSDY KDWFFA VPRK
Subjt:  ALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPRK

Query:  TNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIFLTQPRC
        TN N+H+GTTWQIKFKLD VDHKSMY LRVAIASATLAELQVR+NDPRSKRPLFTSGLIGRDNSIARHGIHG+YW+Y VG+AG HLVEG+NTIFLTQPRC
Subjt:  TNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIFLTQPRC

Query:  TSPFQGIMYDYIRLEGPP
        TSPFQGIMYDYIRLEGPP
Subjt:  TSPFQGIMYDYIRLEGPP

A0A1S3CQJ4 Rhamnogalacturonan endolyase

0.0e+00

92.23

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Query:  VVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEEQVELSFMRMWEPSLEGKFVPLNIDKRFI
        VVVDNGILQLTLSKPDGI+TGIRYNGVDNLLEVLNPE NRGYWDLVWNSPGSKGIFDVIKGS F V+VENEEQVELSF+RMW+PSLEGKFVPLNIDKRFI
Subjt:  VVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEEQVELSFMRMWEPSLEGKFVPLNIDKRFI

Query:  VLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDDKYQYSCESKDLK
        VLRGSSGFYSYAIYEHLKDWPDFD+GETRITFKLRKDKFQYMAVADNRQR MPLPDDRLSGRCQTLAYPEAVLLT+PKN  LKGEVDDKYQYSCE+ +LK
Subjt:  VLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDDKYQYSCESKDLK

Query:  VHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFWLWEDAKIQMMTEVQ
        VHGWI TNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLY NSTSVGDDPFWLWEDAKIQMM EV+
Subjt:  VHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFWLWEDAKIQMMTEVQ

Query:  SWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCD
        SWPYSFPASEDF K DQRG VSGRLLVFDRYV QDYLP SGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINH+  GDYNLYAWV GFIGDYRCD
Subjt:  SWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCD

Query:  ALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPRK
        AL+N++QGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFY PDPNPI+IN LFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDY KDWFFA VPRK
Subjt:  ALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPRK

Query:  TNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIFLTQPRC
        TNSN+H+GTTWQIKF+LD VD KSMYMLRVAIASATLAELQVR+NDPRSKRPLFTSGLIGRDNSIARHGIHG+YW+YSV +AG HLVEG+NTIFLTQPRC
Subjt:  TNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIFLTQPRC

Query:  TSPFQGIMYDYIRLEGPP
        TSPFQGIMYDYIRLEGPP
Subjt:  TSPFQGIMYDYIRLEGPP

A0A5D3E6J1 Rhamnogalacturonan endolyase

0.0e+00

92.23

Show/hide

Query:  VVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEEQVELSFMRMWEPSLEGKFVPLNIDKRFI
        VVVDNGILQLTLSKPDGI+TGIRYNGVDNLLEVLNPE NRGYWDLVWNSPGSKGIFDVIKGS F V+VENEEQVELSF+RMW+PSLEGKFVPLNIDKRFI
Subjt:  VVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEEQVELSFMRMWEPSLEGKFVPLNIDKRFI

Query:  VLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDDKYQYSCESKDLK
        VLRGSSGFYSYAIYEHLKDWPDFD+GETRITFKLRKDKFQYMAVADNRQR MPLPDDRLSGRCQTLAYPEAVLLT+PKN  LKGEVDDKYQYSCE+ +LK
Subjt:  VLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDDKYQYSCESKDLK

Query:  VHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFWLWEDAKIQMMTEVQ
        VHGWI TNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLY NSTSVGDDPFWLWEDAKIQMM EV+
Subjt:  VHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFWLWEDAKIQMMTEVQ

Query:  SWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCD
        SWPYSFPASEDF K DQRG VSGRLLVFDRYV QDYLP SGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINH+  GDYNLYAWV GFIGDYRCD
Subjt:  SWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCD

Query:  ALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPRK
        AL+N++QGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFY PDPNPI+IN LFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDY KDWFFA VPRK
Subjt:  ALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPRK

Query:  TNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIFLTQPRC
        TNSN+H+GTTWQIKF+LD VD KSMYMLRVAIASATLAELQVR+NDPRSKRPLFTSGLIGRDNSIARHGIHG+YW+YSV +AG HLVEG+NTIFLTQPRC
Subjt:  TNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIFLTQPRC

Query:  TSPFQGIMYDYIRLEGPP
        TSPFQGIMYDYIRLEGPP
Subjt:  TSPFQGIMYDYIRLEGPP

A0A6J1FQM1 Rhamnogalacturonan endolyase

0.0e+00

89.79

Show/hide

Query:  VVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEEQVELSFMRMWEPSLEGKFVPLNIDKRFI
        VVVDNGILQLTLSKPDGI+TGIRYNGVDNLLEVLNPE NRGYWD+VWNSPGS+GIFDVIKGSSFRV+VENEEQVELSF RMW+PSLEGK VPLNIDKRFI
Subjt:  VVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEEQVELSFMRMWEPSLEGKFVPLNIDKRFI

Query:  VLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDDKYQYSCESKDLK
        VLRGSSGFYSYAIYEHLKDWPDFD+GETRITFKLRKDKFQYMAVADNRQR MPLPDDRLSGRCQTL +PEAVLLTNPKNP+ + EVDDKYQYSC++KDLK
Subjt:  VLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDDKYQYSCESKDLK

Query:  VHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFWLWEDAKIQMMTEVQ
        VHGWI TNPP GFWQITPSDEFRSGGP KQSLTSHVGPTTLAIFLS HYAGQDLVPKFR GEPWKKVFGPVFLY NST  GDDPFWLWEDAKIQMM EVQ
Subjt:  VHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFWLWEDAKIQMMTEVQ

Query:  SWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCD
        SWPYSFPAS+DFPK+DQRGT+SGRLLVFDRY+S+DYLPA GAFVGLSAPGEVGSWQRECKGYQFWTRADD GYF INH+H G YNLYAWV GFIGDYRCD
Subjt:  SWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCD

Query:  ALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPRK
        ALINI+QGS IE+GDLVYEPPRDGPTLWEIGIPDRSASEFY PDPNP+HIN LFVNHP+RFRQYGLW+RYAELYPDEDLVYTVGTSDYSKDWFFAQVPRK
Subjt:  ALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPRK

Query:  TNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIFLTQPRC
        TN N+HQGTTW+I FKLD VD K+ YMLRVAIASATLAELQ+R+NDP SKRPLFTSGLIGRDNSIARHGIHG+YWLYSVGIAG HLVEGDN IF TQPRC
Subjt:  TNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIFLTQPRC

Query:  TSPFQGIMYDYIRLEGP
        TSPFQGIMYDYIRLE P
Subjt:  TSPFQGIMYDYIRLEGP

A0A6J1J0S6 Rhamnogalacturonan endolyase

0.0e+00

89.95

Show/hide

Query:  VVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEEQVELSFMRMWEPSLEGKFVPLNIDKRFI
        VVVDNGILQLTLSKPDGI+TGI YNGVDNLLEVLNPE NRGYWD+VWNSPGS+GIFDVIKGSSFRV+VENEEQVELSF RMW+PSLEGK VPLNIDKRFI
Subjt:  VVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEEQVELSFMRMWEPSLEGKFVPLNIDKRFI

Query:  VLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDDKYQYSCESKDLK
        VLRGSSGFYSYAIYEHLKDWPDFD+GETRITFKLRKDKFQYMAVADNRQR MPLPDDRLSGRCQTL +PEAVLLTNPKNP+ + EVDDKYQYSCE+KDLK
Subjt:  VLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDDKYQYSCESKDLK

Query:  VHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFWLWEDAKIQMMTEVQ
        VHGWI  NPP GFWQITPSDEFRSGGP KQSLTSHVGPTTLAIFLS HYAGQDLVPKFR GEPWKKVFGPVFLY NST  GDDPFWLWEDAKIQMM EVQ
Subjt:  VHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFWLWEDAKIQMMTEVQ

Query:  SWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCD
        SWPYSFPAS++FPK+DQRGT+SGRLLVFDRY+S+DYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADD GYF INH+H G YNLYAWV GFIGDYRCD
Subjt:  SWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCD

Query:  ALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPRK
        ALINI+QGS IE+G+LVYEPPRDGPTLWEIGIPDRSASEFY PDPNP+HIN LFVNHP+RFRQYGLW+RYAELYPDEDLVYTVGTSDYSKDWFFAQVPRK
Subjt:  ALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPRK

Query:  TNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIFLTQPRC
        TN+N+HQGTTW+I FKLD VD KS YMLRVAIASATLAELQVR+NDP SKRPLFTSGLIGRDNSIARHGIHG+YWLYSVGIAG HLVEGDN IF TQPRC
Subjt:  TNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIFLTQPRC

Query:  TSPFQGIMYDYIRLEGP
        TSPFQGIMYDYIRLEGP
Subjt:  TSPFQGIMYDYIRLEGP

SwissProt top hits

e value

%identity

Alignment

A5ABH4 Probable rhamnogalacturonate lyase B

2.6e-19

26.33

Show/hide

Query:  KYQYSCESKDLKVHGWIC----TNPPT-GFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDD
        KY +S   +D  VHG       +N  T G W +  + +   GGPL   LT  V        +S H+   +  P    G  + + FGP + +FN    G  
Subjt:  KYQYSCESKDLKVHGWIC----TNPPT-GFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDD

Query:  PFWLWEDAKIQMMTEVQ-SWPYSFPAS-----EDFPKVDQRGTVSGRLLVFDRYVSQDYLP--ASGAFVGLSAPGEVGSWQR-ECKGYQFWTRADDGGYF
             ++ K    T    SW   F  S       +    QRG+V G++           LP  A+     L+  G+           YQ+W   DD G+F
Subjt:  PFWLWEDAKIQMMTEVQ-SWPYSFPAS-----EDFPKVDQRGTVSGRLLVFDRYVSQDYLP--ASGAFVGLSAPGEVGSWQR-ECKGYQFWTRADDGGYF

Query:  TINHIHAGDYNLYAWVHGFIGDYRCDALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEF---YAPDP-NPIHINNLFVNHPDRFRQYGLWDRY
        +++H+  G Y L  +  G  GD+  D  + +  G    + +  +E    G  +W +G PD+S+ EF    A DP +P+H        P+    +G +D  
Subjt:  TINHIHAGDYNLYAWVHGFIGDYRCDALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEF---YAPDP-NPIHINNLFVNHPDRFRQYGLWDRY

Query:  AELYPDEDLVYTVGTSDYSKD-----W-FFAQVPRKTNSNAHQGTTWQIKFKL--DSVDHKSMYMLRVAIASATLA
        ++ +PD  + YT+GTSD + D     W  F   P            W I F L  D +  +S   L + +A A  A
Subjt:  AELYPDEDLVYTVGTSDYSKD-----W-FFAQVPRKTNSNAHQGTTWQIKFKL--DSVDHKSMYMLRVAIASATLA

Q5AZ85 Rhamnogalacturonate lyase B

2.6e-19

23.05

Show/hide

Query:  GSSGFYSYAIYEHLKDWPDF--DLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNP---QLKGEVDDKYQYSCESKD
        G +GF+ ++   +  +   F  +L E R  F+   D + ++  +D   +  PLP D      Q +       L N  +    Q   E   KY +S   +D
Subjt:  GSSGFYSYAIYEHLKDWPDF--DLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNP---QLKGEVDDKYQYSCESKD

Query:  LKVHGWICTNPPT-----GFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFWLWEDAKI
          VHG       +     G W +  + +   GGPL   LT  V        +S H+   +  P    G  + + FGP F  FN    G     L E    
Subjt:  LKVHGWICTNPPT-----GFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFWLWEDAKI

Query:  QMMTEVQSWPYSFPAS-----EDFPKVDQRGTVSGRLLVFDRYVSQDYLP--ASGAFVGLSAPGEVGSWQREC-KGYQFWTRADDGGYFTINHIHAGDYN
               SW   F  S       +    QRG+V G +           LP  A      L+  G            +Q+W   D  G F+I+ + AG Y 
Subjt:  QMMTEVQSWPYSFPAS-----EDFPKVDQRGTVSGRLLVFDRYVSQDYLP--ASGAFVGLSAPGEVGSWQREC-KGYQFWTRADDGGYFTINHIHAGDYN

Query:  LYAWVHGFIGDYRCDAL-ININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEF-YAPDPNPIHINNLFVNHPDRFRQY-GLWDRYAELYPDEDLVYT
        L  +  G  GD+  D + +   + + I+     ++P   G  +W +G PD+S+ EF +    +P H       HP  +  Y G +D  ++     D  Y 
Subjt:  LYAWVHGFIGDYRCDAL-ININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEF-YAPDPNPIHINNLFVNHPDRFRQY-GLWDRYAELYPDEDLVYT

Query:  VGTSDYSKDW------FFAQVPRKTNSNAHQGTTWQIKFKLDS--VDHKSMYMLRVAIASATLAELQVRI---NDPRSKRPLFT---------SGLIGRD
        +G SD + D+       F   P    + ++    W+I+F L +  +  +    L + +A A  A     +   ++P +  PL +         + +IG D
Subjt:  VGTSDYSKDW------FFAQVPRKTNSNAHQGTTWQIKFKLDS--VDHKSMYMLRVAIASATLAELQVRI---NDPRSKRPLFT---------SGLIGRD

Query:  NS---IARHGIHGLYWLYSVGIAGSHLVEGDNTIFLTQPRCTSPFQG--------IMYDYIRLE
         S   I R  +             S L EG N + L+ P   + ++         + YD +RLE
Subjt:  NS---IARHGIHGLYWLYSVGIAGSHLVEGDNTIFLTQPRCTSPFQG--------IMYDYIRLE

Arabidopsis top hits

e value

%identity

Alignment

AT1G09880.1 Rhamnogalacturonate lyase family protein

6.9e-241

60.67

Show/hide

Query:  VDNGILQLTLSKPDGIVTGIRYNGVDNLLE-VLNPEHNRGYWDLVWNSPG-----SKGIFDVIKGSSFRVVVENEEQVELSFMRMWEPSLEGKFVPLNID
        ++N  LQLTLS P+G VTGI+YNG+DN+L    N E++RGYWD+VWN PG     +KG  D I+ +   V+ +N+E++ELSF R W  S     VP+NID
Subjt:  VDNGILQLTLSKPDGIVTGIRYNGVDNLLE-VLNPEHNRGYWDLVWNSPG-----SKGIFDVIKGSSFRVVVENEEQVELSFMRMWEPSLEGKFVPLNID

Query:  KRFIVLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDDKYQYSCES
        KRF++L+ SSGFYSYAI+E L+ WP  +L   R+ FKL K KF YMA++D+RQR+MP+PDDR+  R Q LAYPEAV L +P  P+ KGEVDDKY+YS ES
Subjt:  KRFIVLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDDKYQYSCES

Query:  KDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFWLWEDAKIQMM
        KD+KVHGWI TN   GFWQITPS+EFRS GPLKQ L SHVGPT LA+F S HY G DL+  F+ GE WKKVFGPVF+Y NS   G DP  LW +AK Q  
Subjt:  KDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFWLWEDAKIQMM

Query:  TEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGD
         E + WPY+F AS+DFP  DQRG+VSGRLLV DR++S + +PA+G++VGL+APG+VGSWQRECKGYQFW++AD+ G F+IN++ +G YNLYA+  GFIGD
Subjt:  TEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGD

Query:  YRCDALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYSKDWFFAQ
        Y  D + +I+ GS I +GDLVYEPPRDG TLWEIG+PDRSA+EFY PDPNP  +N L++NH D++RQYGLW+RY+ELYPDED+VY V   DYSK+WFF Q
Subjt:  YRCDALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYSKDWFFAQ

Query:  VPRKTNSNAHQGTTWQIKFKLDS--VDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIF
        V RK  +  ++GTTWQI+F+ D    +    + LR+A+A++ +AELQVR+ND  +  PLF +  IGRDN+IARHGIHGLYWLYSV +  + L  G+NTI+
Subjt:  VPRKTNSNAHQGTTWQIKFKLDS--VDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIF

Query:  LTQPRCTSPFQGIMYDYIRLEGP
        LTQ   TSPFQG+MYDYIRLE P
Subjt:  LTQPRCTSPFQGIMYDYIRLEGP

AT1G09890.1 Rhamnogalacturonate lyase family protein

9.9e-280

70.66

Show/hide

Query:  VDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEEQVELSFMRMWEPSLEGKFVPLNIDKRFIVL
        +DNGI ++TLSKPDGIVTGI YNG+DNLLEVLN E NRGYWDLVW   G+ G FDVIKGS+F V+V+NEEQ+ELSF R W+PS EGK VPLNIDKRF++L
Subjt:  VDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEEQVELSFMRMWEPSLEGKFVPLNIDKRFIVL

Query:  RGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDDKYQYSCESKDLKVH
         GSSGFY+YAIYEHLK+WP F L ETRI FKLRK+KF YMAV D+RQRFMPLPDDRL  R Q LAYPEAVLL NP   Q KGEVDDKYQYSCE+KD+ VH
Subjt:  RGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDDKYQYSCESKDLKVH

Query:  GWICTNPPT-GFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGD-DPFWLWEDAKIQMMTEVQ
        GWICT  P+ GFW ITPS E+R+GGP KQ+LTSHVGPT LA+F+SAHY G+DLVPKF  GE WKKVFGPVF+Y NS++  D DP WLW+DAK QM  E +
Subjt:  GWICTNPPT-GFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGD-DPFWLWEDAKIQMMTEVQ

Query:  SWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCD
        SWPYSFPAS+D+ K +QRG V GRLLV DRYV +D++ A+  +VGL+ PG  GSWQRECK YQFWTR D+ G+F I+ I  G YNLYAW+ GFIGDY+ D
Subjt:  SWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCD

Query:  ALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPRK
         +I I  G  I + DLVY+PPR+G TLWEIG PDRSA+EFY PDPNP +INNL+ NHPDRFRQYGLW+RYAELYPD+DLVY VG+SDY KDWF+AQV RK
Subjt:  ALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPRK

Query:  TNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIFLTQPRC
         ++  +QGTTWQIKF+L ++D    Y LRVAIASAT +ELQ+R+N+  +  P+FTSGLIGRDNSIARHGIHGLYWL++V +AGS L+EG+NT+FLTQPR 
Subjt:  TNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIFLTQPRC

Query:  TSPFQGIMYDYIRLEGP
        TSPFQGIMYDYIR E P
Subjt:  TSPFQGIMYDYIRLEGP

AT1G09910.1 Rhamnogalacturonate lyase family protein

1.4e-286

70.71

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Query:  VVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEEQVELSFMRMWEPSLEGKFVPLNIDKRFI
        VV+DNGILQ+TLSKP GI+TGI YNG+DN+LEV N E NRGYWDL WN PG KGIFDVI G +FRV+VE EEQVE+SF+R W+PSLEGK++PLNIDKRFI
Subjt:  VVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEEQVELSFMRMWEPSLEGKFVPLNIDKRFI

Query:  VLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDDKYQYSCESKDLK
        +LRGSSG YSY IYEHLKDWP F+LGETRI FKLRKDKF YMAVAD+R+R MP PDD   GRCQTL Y EA LLT P +P+L+GEVDDKYQYSCE+KDL+
Subjt:  VLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDDKYQYSCESKDLK

Query:  VHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFWLWEDAKIQMMTEVQ
        VHGWI  +PP GFWQITPS+EFRSGGPLKQ+LTSHVGPTTLA+F S HYAG+ ++P+F  GEPWKKV+GPVF+Y NST+ GDDP  LW+DAKI+MM EV+
Subjt:  VHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFWLWEDAKIQMMTEVQ

Query:  SWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCD
         WPYSF AS+D+PK ++RGT  GRLL+ DR+++ D + A GA+VGL+ PG+ GSWQ ECKGYQFW  AD+ GYF+I ++  G+YNLYAWV  FIGDY   
Subjt:  SWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCD

Query:  ALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPRK
         ++ +  G  IEMGD+VYEPPRDGPTLWEIGIPDR ASEF+ PDP+P  +N + V+H DRFRQYGLW +Y ++YP++DLVYTVG SDY +DWFFA VPRK
Subjt:  ALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPRK

Query:  TNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIFLTQPRC
           + H+GTTWQI F L+++D K+ Y LRVAIASATLAELQ+RIND  + RPLFT+GLIGRDNSIARHGIHG+Y LY+V I G+ LV+GDNTIFL QPRC
Subjt:  TNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIFLTQPRC

Query:  TSPFQGIMYDYIRLEGPP
          PFQGIMYDYIRLEGPP
Subjt:  TSPFQGIMYDYIRLEGPP

AT2G22620.1 Rhamnogalacturonate lyase family protein

2.8e-226

58.9

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Query:  VVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEEQVELSFMRMWEPSLEGKFVPLNIDKRFI
        VVVDNGI+Q+T S P+G++TGI+Y+G+DN+L+  +   +RGYWD+VW  P  K   D ++G+ F ++ +NEEQ+E+SF R W  S  G  VPLN+DKR+I
Subjt:  VVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEEQVELSFMRMWEPSLEGKFVPLNIDKRFI

Query:  VLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDDKYQYSCESKDLK
        +  G SG Y Y I E L+ WPD D+ + RI FKL   KF +MA++D+RQR MP   DR + +  +LAY EAVLLTNP NP  KGEVDDKY YS E KD  
Subjt:  VLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDDKYQYSCESKDLK

Query:  VHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFWLWEDAKIQMMTEVQ
        VHGWI ++PP GFW ITPSDEFR GGP+KQ LTSH GP TL++F S HYAG+++   +R GEPWKKVFGPV  Y NS S  D    LW DAK QM  EV+
Subjt:  VHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFWLWEDAKIQMMTEVQ

Query:  SWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCD
        SWPY F  SED+P   QRGT+ G+ L+ D YVS+  +    AFVGL+  GE GSWQ E KGYQFWT+AD  G F I ++ AG+Y+LYAW  GFIGDY+ +
Subjt:  SWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCD

Query:  ALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNH-PDRFRQYGLWDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPR
          I I  GS + +G LVYEPPR+GPTLWEIG+PDR+A EFY PDP P  +N L+VN   DRFRQYGLWDRYA+LYP  DLVYT+G SDY  DWFFA V R
Subjt:  ALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNH-PDRFRQYGLWDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPR

Query:  KTNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIFLTQPR
           ++ +Q TTWQI F L +V+    Y LR+A+ASA  +ELQ+RINDP+S   +FT+G IG+DN+IARHGIHGLY LYS+ +AG+ L  GDNTIFLTQ R
Subjt:  KTNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIFLTQPR

Query:  CTSPFQGIMYDYIRLEGP
          +PFQGIMYDYIRLE P
Subjt:  CTSPFQGIMYDYIRLEGP

AT4G24430.1 Rhamnogalacturonate lyase family protein

7.9e-253

64.32

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Query:  VVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWN---SPGSKGIFDVIKGSSFRVVVENEEQVELSFMRMWEPSLEGKFVPLNIDK
        VV+ NG +++T+SKPDG VTGI Y GVDNLLE  N + NRGYWDLVW+   +PG+ G  + IKG+SF VVVENEE VE+SF R W+ SL+    P+N+DK
Subjt:  VVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWN---SPGSKGIFDVIKGSSFRVVVENEEQVELSFMRMWEPSLEGKFVPLNIDK

Query:  RFIVLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDDKYQYSCESK
        RFI+ +  +GFYSYAI+EHL +WP F+L +TRI +KLRKDKF+YMA+ADNRQR MPLP+DRL  R + LAYPEAVLL +P   + KGEVDDKY+YS E+K
Subjt:  RFIVLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDDKYQYSCESK

Query:  DLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNS-TSVGDDPFWLWEDAKIQMM
        DLKVHGWI  N   G WQI PS+EFRSGG  KQ+LTSHVGP +LA+FLSAHYAG+D+V K +AG+ WKKVFGPVF Y N       DP  LW+DAK QM+
Subjt:  DLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNS-TSVGDDPFWLWEDAKIQMM

Query:  TEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGD
        TEVQSWPY FPASEDFP  D+RG +SGRLLV D+++S D+LPA+GAFVGL+ PGEVGSWQ E KGYQFWT AD  GYF IN I  G+YNL  +V G+IGD
Subjt:  TEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGD

Query:  YRCDALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYSKDWFFAQ
        Y+ + LINI  G  I++G++VYEPPRDGPT+WEIGIPDRSA+EF+ PDPNP +IN L++ HPDRFRQYGLW+RY ELYP EDLV+T+G SDY KDWFFA 
Subjt:  YRCDALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYSKDWFFAQ

Query:  VPRKTNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKR--PLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIF
        V RK   + +Q TTWQIKFKL++V     Y +R+A+A+A +AELQVR+ND  +++  P+FT+G+IG DN+IARHGIHG+Y LY+V +    LVEGDNT+F
Subjt:  VPRKTNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKR--PLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIF

Query:  LTQPRCTS-PFQGIMYDYIRLEGPP
        LTQ   T+  F G+MYDYIRLEGPP
Subjt:  LTQPRCTS-PFQGIMYDYIRLEGPP

Sequences

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CDS sequence

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GTGCAGGTGGTGGTGGATAATGGAATACTGCAACTAACTTTATCAAAACCAGACGGAATTGTCACTGGCATACGATATAATGGCGTTGACAATCTGCTTGAAGTTCTTAA
CCCTGAACATAACAGAGGGTACTGGGACCTTGTTTGGAATTCTCCAGGAAGCAAAGGAATATTTGACGTGATTAAGGGATCAAGTTTTAGGGTTGTAGTGGAAAATGAGG
AACAGGTAGAGCTTTCTTTTATGAGGATGTGGGAGCCCTCCCTCGAGGGCAAGTTTGTTCCTTTGAACATAGACAAAAGGTTCATAGTGCTACGTGGTTCCTCTGGATTC
TACTCTTATGCAATTTATGAGCACTTGAAGGATTGGCCTGATTTTGATCTTGGTGAAACCAGGATCACTTTTAAGCTCAGAAAAGACAAGTTTCAGTACATGGCTGTAGC
TGATAACAGGCAGAGATTCATGCCGCTGCCCGATGATCGGTTATCTGGAAGATGCCAAACTTTGGCCTACCCCGAAGCCGTCTTACTTACTAATCCCAAGAACCCTCAAC
TCAAGGGTGAGGTGGATGACAAATACCAATACTCATGTGAAAGCAAAGACTTAAAGGTCCATGGATGGATATGCACCAATCCACCCACCGGGTTTTGGCAGATTACACCC
AGTGATGAGTTTCGGTCAGGCGGACCTCTTAAGCAAAGTCTAACATCACATGTGGGACCTACAACCCTTGCTATATTTCTTAGTGCTCATTATGCGGGACAAGATTTGGT
GCCAAAATTTAGAGCCGGTGAGCCATGGAAGAAGGTTTTTGGCCCTGTTTTTCTCTATTTTAATTCCACGTCAGTTGGAGATGACCCATTTTGGTTATGGGAGGATGCTA
AAATACAGATGATGACGGAAGTTCAAAGTTGGCCTTATAGTTTCCCTGCATCTGAGGATTTCCCGAAAGTGGATCAACGGGGTACTGTTAGTGGTAGACTACTGGTTTTT
GACAGGTATGTTAGTCAAGACTATCTGCCTGCCAGTGGAGCCTTTGTAGGATTGTCTGCACCAGGAGAAGTAGGGTCATGGCAGAGAGAATGCAAGGGATATCAATTCTG
GACTAGAGCAGATGATGGTGGTTATTTTACCATCAACCACATACACGCTGGCGACTATAATCTATATGCGTGGGTCCACGGCTTTATTGGAGATTATCGTTGTGATGCTC
TTATTAACATAAACCAAGGATCTTGCATTGAAATGGGCGACCTCGTATATGAACCTCCAAGAGATGGGCCCACACTTTGGGAAATAGGCATTCCTGATCGCTCTGCATCT
GAGTTCTATGCTCCTGATCCTAACCCGATACATATTAATAACCTCTTTGTAAACCATCCAGACAGGTTCCGGCAATATGGATTGTGGGACAGATATGCTGAATTATACCC
TGACGAGGATTTAGTATACACAGTTGGCACAAGCGATTATAGTAAAGATTGGTTCTTCGCTCAGGTCCCAAGGAAGACAAACAGTAACGCGCATCAAGGAACTACTTGGC
AAATCAAATTCAAACTCGATAGTGTGGATCACAAGAGTATGTATATGCTACGAGTCGCGATTGCATCTGCAACTCTTGCTGAATTGCAGGTCCGGATTAATGACCCGAGA
TCAAAGCGACCTCTGTTTACGAGTGGGTTGATAGGGAGGGACAACTCAATTGCTAGACATGGAATTCATGGACTTTATTGGCTTTACAGCGTGGGGATAGCAGGCTCTCA
TCTTGTTGAAGGAGATAACACGATCTTCTTGACTCAGCCACGCTGCACCAGCCCTTTCCAAGGTATCATGTATGATTACATCCGTCTGGAAGGTCCCCCA

mRNA sequence

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Protein sequence

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VQVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEEQVELSFMRMWEPSLEGKFVPLNIDKRFIVLRGSSGF
YSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDDKYQYSCESKDLKVHGWICTNPPTGFWQITP
SDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFWLWEDAKIQMMTEVQSWPYSFPASEDFPKVDQRGTVSGRLLVF
DRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCDALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSAS
EFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPR
SKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIFLTQPRCTSPFQGIMYDYIRLEGPP

MS008336 (gene) of Bitter gourd (TR) v1 genome