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MS008343 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008343
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionBEACH domain-containing protein B
Genome locationscaffold4:687179..687553
RNA-Seq ExpressionMS008343
SyntenyMS008343
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038658.1 BEACH domain-containing protein B isoform X1 [Cucumis melo var. makuwa]1.4e-5483.87Show/hide
Query:  MLQEYKLQIGELSGQLDFKSPILDRKCNVAAQSGECFTVPVTNLTHIQSWNDYVVKLCRALCSFLLAPDDVKPQHPQLSSIRIMTPVSLVYGDLSIKWVM
        MLQEYKLQIGELSGQ DF+ PILD K NVAA SGEC  VP+T+LTH+QSWN YVVKLC+ LCSFLLAP+DVKP HPQ SS+RIMTPVSLVYGDLSIKWVM
Subjt:  MLQEYKLQIGELSGQLDFKSPILDRKCNVAAQSGECFTVPVTNLTHIQSWNDYVVKLCRALCSFLLAPDDVKPQHPQLSSIRIMTPVSLVYGDLSIKWVM

Query:  RVLVAVFPCIKACSNQNDFPAHLR
        RVLVAVFPCI+ACSNQND PAHLR
Subjt:  RVLVAVFPCIKACSNQNDFPAHLR
TYK31268.1 BEACH domain-containing protein B isoform X2 [Cucumis melo var. makuwa]1.4e-5483.87Show/hide
Query:  MLQEYKLQIGELSGQLDFKSPILDRKCNVAAQSGECFTVPVTNLTHIQSWNDYVVKLCRALCSFLLAPDDVKPQHPQLSSIRIMTPVSLVYGDLSIKWVM
        MLQEYKLQIGELSGQ DF+ PILD K NVAA SGEC  VP+T+LTH+QSWN YVVKLC+ LCSFLLAP+DVKP HPQ SS+RIMTPVSLVYGDLSIKWVM
Subjt:  MLQEYKLQIGELSGQLDFKSPILDRKCNVAAQSGECFTVPVTNLTHIQSWNDYVVKLCRALCSFLLAPDDVKPQHPQLSSIRIMTPVSLVYGDLSIKWVM

Query:  RVLVAVFPCIKACSNQNDFPAHLR
        RVLVAVFPCI+ACSNQND PAHLR
Subjt:  RVLVAVFPCIKACSNQNDFPAHLR
XP_008466148.1 PREDICTED: BEACH domain-containing protein B isoform X1 [Cucumis melo]1.4e-5483.87Show/hide
Query:  MLQEYKLQIGELSGQLDFKSPILDRKCNVAAQSGECFTVPVTNLTHIQSWNDYVVKLCRALCSFLLAPDDVKPQHPQLSSIRIMTPVSLVYGDLSIKWVM
        MLQEYKLQIGELSGQ DF+ PILD K NVAA SGEC  VP+T+LTH+QSWN YVVKLC+ LCSFLLAP+DVKP HPQ SS+RIMTPVSLVYGDLSIKWVM
Subjt:  MLQEYKLQIGELSGQLDFKSPILDRKCNVAAQSGECFTVPVTNLTHIQSWNDYVVKLCRALCSFLLAPDDVKPQHPQLSSIRIMTPVSLVYGDLSIKWVM

Query:  RVLVAVFPCIKACSNQNDFPAHLR
        RVLVAVFPCI+ACSNQND PAHLR
Subjt:  RVLVAVFPCIKACSNQNDFPAHLR
XP_008466150.1 PREDICTED: BEACH domain-containing protein B isoform X2 [Cucumis melo]1.4e-5483.87Show/hide
Query:  MLQEYKLQIGELSGQLDFKSPILDRKCNVAAQSGECFTVPVTNLTHIQSWNDYVVKLCRALCSFLLAPDDVKPQHPQLSSIRIMTPVSLVYGDLSIKWVM
        MLQEYKLQIGELSGQ DF+ PILD K NVAA SGEC  VP+T+LTH+QSWN YVVKLC+ LCSFLLAP+DVKP HPQ SS+RIMTPVSLVYGDLSIKWVM
Subjt:  MLQEYKLQIGELSGQLDFKSPILDRKCNVAAQSGECFTVPVTNLTHIQSWNDYVVKLCRALCSFLLAPDDVKPQHPQLSSIRIMTPVSLVYGDLSIKWVM

Query:  RVLVAVFPCIKACSNQNDFPAHLR
        RVLVAVFPCI+ACSNQND PAHLR
Subjt:  RVLVAVFPCIKACSNQNDFPAHLR
XP_022147188.1 BEACH domain-containing protein B [Momordica charantia]1.1e-6599.19Show/hide
Query:  MLQEYKLQIGELSGQLDFKSPILDRKCNVAAQSGECFTVPVTNLTHIQSWNDYVVKLCRALCSFLLAPDDVKPQHPQLSSIRIMTPVSLVYGDLSIKWVM
        MLQEYKLQIGELSGQLDFKSPILDRKCNVAAQSGECFTVP+TNLTHIQSWNDYVVKLCRALCSFLLAPDDVKPQHPQLSSIRIMTPVSLVYGDLSIKWVM
Subjt:  MLQEYKLQIGELSGQLDFKSPILDRKCNVAAQSGECFTVPVTNLTHIQSWNDYVVKLCRALCSFLLAPDDVKPQHPQLSSIRIMTPVSLVYGDLSIKWVM

Query:  RVLVAVFPCIKACSNQNDFPAHLR
        RVLVAVFPCIKACSNQNDFPAHLR
Subjt:  RVLVAVFPCIKACSNQNDFPAHLR
TrEMBL top hitse value%identityAlignment
A0A1S3CQK0 BEACH domain-containing protein B isoform X26.9e-5583.87Show/hide
Query:  MLQEYKLQIGELSGQLDFKSPILDRKCNVAAQSGECFTVPVTNLTHIQSWNDYVVKLCRALCSFLLAPDDVKPQHPQLSSIRIMTPVSLVYGDLSIKWVM
        MLQEYKLQIGELSGQ DF+ PILD K NVAA SGEC  VP+T+LTH+QSWN YVVKLC+ LCSFLLAP+DVKP HPQ SS+RIMTPVSLVYGDLSIKWVM
Subjt:  MLQEYKLQIGELSGQLDFKSPILDRKCNVAAQSGECFTVPVTNLTHIQSWNDYVVKLCRALCSFLLAPDDVKPQHPQLSSIRIMTPVSLVYGDLSIKWVM

Query:  RVLVAVFPCIKACSNQNDFPAHLR
        RVLVAVFPCI+ACSNQND PAHLR
Subjt:  RVLVAVFPCIKACSNQNDFPAHLR
A0A1S3CRY9 BEACH domain-containing protein B isoform X16.9e-5583.87Show/hide
Query:  MLQEYKLQIGELSGQLDFKSPILDRKCNVAAQSGECFTVPVTNLTHIQSWNDYVVKLCRALCSFLLAPDDVKPQHPQLSSIRIMTPVSLVYGDLSIKWVM
        MLQEYKLQIGELSGQ DF+ PILD K NVAA SGEC  VP+T+LTH+QSWN YVVKLC+ LCSFLLAP+DVKP HPQ SS+RIMTPVSLVYGDLSIKWVM
Subjt:  MLQEYKLQIGELSGQLDFKSPILDRKCNVAAQSGECFTVPVTNLTHIQSWNDYVVKLCRALCSFLLAPDDVKPQHPQLSSIRIMTPVSLVYGDLSIKWVM

Query:  RVLVAVFPCIKACSNQNDFPAHLR
        RVLVAVFPCI+ACSNQND PAHLR
Subjt:  RVLVAVFPCIKACSNQNDFPAHLR
A0A5A7T729 BEACH domain-containing protein B isoform X16.9e-5583.87Show/hide
Query:  MLQEYKLQIGELSGQLDFKSPILDRKCNVAAQSGECFTVPVTNLTHIQSWNDYVVKLCRALCSFLLAPDDVKPQHPQLSSIRIMTPVSLVYGDLSIKWVM
        MLQEYKLQIGELSGQ DF+ PILD K NVAA SGEC  VP+T+LTH+QSWN YVVKLC+ LCSFLLAP+DVKP HPQ SS+RIMTPVSLVYGDLSIKWVM
Subjt:  MLQEYKLQIGELSGQLDFKSPILDRKCNVAAQSGECFTVPVTNLTHIQSWNDYVVKLCRALCSFLLAPDDVKPQHPQLSSIRIMTPVSLVYGDLSIKWVM

Query:  RVLVAVFPCIKACSNQNDFPAHLR
        RVLVAVFPCI+ACSNQND PAHLR
Subjt:  RVLVAVFPCIKACSNQNDFPAHLR
A0A5D3E639 BEACH domain-containing protein B isoform X26.9e-5583.87Show/hide
Query:  MLQEYKLQIGELSGQLDFKSPILDRKCNVAAQSGECFTVPVTNLTHIQSWNDYVVKLCRALCSFLLAPDDVKPQHPQLSSIRIMTPVSLVYGDLSIKWVM
        MLQEYKLQIGELSGQ DF+ PILD K NVAA SGEC  VP+T+LTH+QSWN YVVKLC+ LCSFLLAP+DVKP HPQ SS+RIMTPVSLVYGDLSIKWVM
Subjt:  MLQEYKLQIGELSGQLDFKSPILDRKCNVAAQSGECFTVPVTNLTHIQSWNDYVVKLCRALCSFLLAPDDVKPQHPQLSSIRIMTPVSLVYGDLSIKWVM

Query:  RVLVAVFPCIKACSNQNDFPAHLR
        RVLVAVFPCI+ACSNQND PAHLR
Subjt:  RVLVAVFPCIKACSNQNDFPAHLR
A0A6J1D0K9 BEACH domain-containing protein B5.1e-6699.19Show/hide
Query:  MLQEYKLQIGELSGQLDFKSPILDRKCNVAAQSGECFTVPVTNLTHIQSWNDYVVKLCRALCSFLLAPDDVKPQHPQLSSIRIMTPVSLVYGDLSIKWVM
        MLQEYKLQIGELSGQLDFKSPILDRKCNVAAQSGECFTVP+TNLTHIQSWNDYVVKLCRALCSFLLAPDDVKPQHPQLSSIRIMTPVSLVYGDLSIKWVM
Subjt:  MLQEYKLQIGELSGQLDFKSPILDRKCNVAAQSGECFTVPVTNLTHIQSWNDYVVKLCRALCSFLLAPDDVKPQHPQLSSIRIMTPVSLVYGDLSIKWVM

Query:  RVLVAVFPCIKACSNQNDFPAHLR
        RVLVAVFPCIKACSNQNDFPAHLR
Subjt:  RVLVAVFPCIKACSNQNDFPAHLR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCAAGAATACAAACTGCAGATAGGGGAGTTATCTGGACAGCTTGATTTTAAATCGCCTATTCTTGACCGGAAATGCAATGTTGCAGCACAGTCAGGAGAGTGTTT
TACCGTACCTGTAACCAATCTCACTCATATACAATCTTGGAATGATTATGTGGTGAAATTATGCCGAGCACTTTGTTCTTTTCTTCTTGCTCCAGATGATGTTAAACCTC
AGCATCCTCAATTATCTTCTATTCGAATCATGACACCTGTTTCATTGGTCTATGGCGATCTTTCAATCAAATGGGTCATGAGGGTACTTGTAGCTGTGTTCCCCTGCATT
AAGGCTTGTTCTAATCAAAATGATTTTCCTGCCCACTTGAGGTTC
mRNA sequenceShow/hide mRNA sequence
ATGCTTCAAGAATACAAACTGCAGATAGGGGAGTTATCTGGACAGCTTGATTTTAAATCGCCTATTCTTGACCGGAAATGCAATGTTGCAGCACAGTCAGGAGAGTGTTT
TACCGTACCTGTAACCAATCTCACTCATATACAATCTTGGAATGATTATGTGGTGAAATTATGCCGAGCACTTTGTTCTTTTCTTCTTGCTCCAGATGATGTTAAACCTC
AGCATCCTCAATTATCTTCTATTCGAATCATGACACCTGTTTCATTGGTCTATGGCGATCTTTCAATCAAATGGGTCATGAGGGTACTTGTAGCTGTGTTCCCCTGCATT
AAGGCTTGTTCTAATCAAAATGATTTTCCTGCCCACTTGAGGTTC
Protein sequenceShow/hide protein sequence
MLQEYKLQIGELSGQLDFKSPILDRKCNVAAQSGECFTVPVTNLTHIQSWNDYVVKLCRALCSFLLAPDDVKPQHPQLSSIRIMTPVSLVYGDLSIKWVMRVLVAVFPCI
KACSNQNDFPAHLRF