; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS008361 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008361
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationscaffold4:824681..825589
RNA-Seq ExpressionMS008361
SyntenyMS008361
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136259.1 pentatricopeptide repeat-containing protein At5g18475 [Cucumis sativus]2.1e-15288.12Show/hide
Query:  RVDLARKLLVHARSKLNFKPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNI
        RVDLARKLLV+ARSKLN +PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSA +VSYPNL+TYSTLIGGLC+NGKLKEAIE FEEMVSKD ILPDALTYNI
Subjt:  RVDLARKLLVHARSKLNFKPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNI

Query:  LINGFCQGGKVDRARTIIEFMKSNGCSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRADT
        LINGFCQ GKVDRARTI+EFMKSNGCSPNVFNYSVLMNG+CKEGRLQEAKEVF+E+K L M+PDT+SYTTLINCLCRTGRVDEATELLQQMK+KDCRADT
Subjt:  LINGFCQGGKVDRARTIIEFMKSNGCSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRADT

Query:  VTLNVMLGGLCREGRLKEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRGFVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMG
        VT NVMLGGLCREGR  EALDMVQKLP+EGFYLNK SYRIVLNFLT+KGEL++A+ELLGLMLNRGFVPH+ATSN LL+LLCN GMV DAVESL GLL+MG
Subjt:  VTLNVMLGGLCREGRLKEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRGFVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMG

Query:  FRP
        F+P
Subjt:  FRP

XP_008466175.1 PREDICTED: pentatricopeptide repeat-containing protein At5g18475 [Cucumis melo]9.4e-15388.12Show/hide
Query:  RVDLARKLLVHARSKLNFKPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNI
        RVDLARKLLV+ARSKLN +PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSA +VSYPNL+TYSTLIGGLC+NGKLKEAIE FEEMVSKDKILPDALTYNI
Subjt:  RVDLARKLLVHARSKLNFKPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNI

Query:  LINGFCQGGKVDRARTIIEFMKSNGCSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRADT
        LINGFCQGGKVDRAR I+EFMKSNGC PNVFNYS LMNG+CKEGRLQEAKEVF+E+K L M+PDT+SYTTLINCLCRTGRVDEATELLQQMK+KDCRADT
Subjt:  LINGFCQGGKVDRARTIIEFMKSNGCSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRADT

Query:  VTLNVMLGGLCREGRLKEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRGFVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMG
        VT NVMLGGLCREGR +EALDMVQKLP+EGFYLNK SYRIVLNFLT+KGEL+RA+ELLGLMLNRGFVPH+ATSN LL+LLCN GMV DAVESL GLL+MG
Subjt:  VTLNVMLGGLCREGRLKEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRGFVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMG

Query:  FRP
        F+P
Subjt:  FRP

XP_022143108.1 pentatricopeptide repeat-containing protein At5g18475 [Momordica charantia]9.4e-16998.68Show/hide
Query:  RVDLARKLLVHARSKLNFKPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNI
        RVDLARKLLVHARSKLNFKPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNI
Subjt:  RVDLARKLLVHARSKLNFKPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNI

Query:  LINGFCQGGKVDRARTIIEFMKSNGCSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRADT
        LINGFCQGGKVDRARTIIEFMKSNGCSPN+FNYSVLMNGFCKEGRLQEAKEVFDEMKRL MRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRADT
Subjt:  LINGFCQGGKVDRARTIIEFMKSNGCSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRADT

Query:  VTLNVMLGGLCREGRLKEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRGFVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMG
        VTLNVMLGGLCREGRL+EALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRGFVPHYATSNNLLVLL NGGMVNDAVESLFGLLKMG
Subjt:  VTLNVMLGGLCREGRLKEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRGFVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMG

Query:  FRP
        FRP
Subjt:  FRP

XP_022937178.1 pentatricopeptide repeat-containing protein At5g18475 isoform X2 [Cucurbita moschata]6.8e-15187.46Show/hide
Query:  RVDLARKLLVHARSKLNFKPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNI
        RVDLARKLLV+A SKLN  PNTCIFNILVKHHCRNG+LQAAFEVV+EMKSA +VSYPNLITYSTLIGGLC++GKLKEAIELFE MVSKDKILPDALTYNI
Subjt:  RVDLARKLLVHARSKLNFKPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNI

Query:  LINGFCQGGKVDRARTIIEFMKSNGCSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRADT
        LINGFCQGGKVDRAR I+EFMKSNGCSPNVFNYSVLMNGFCKEG+LQEAKEVF+EMK L M+PDTVSYTTL+NCLCRTGRVDEATELLQ+MK++DCRADT
Subjt:  LINGFCQGGKVDRARTIIEFMKSNGCSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRADT

Query:  VTLNVMLGGLCREGRLKEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRGFVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMG
        +TLNV+LGGLCREGR +EALDMVQKLP+EG+YLNK SYRIVLNFL++KGELKRA+ELLGLMLNRGFVPHYATSN+LLVLLCN GMV DAVESL GLL+MG
Subjt:  VTLNVMLGGLCREGRLKEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRGFVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMG

Query:  FRP
        F+P
Subjt:  FRP

XP_038900183.1 pentatricopeptide repeat-containing protein At5g18475 [Benincasa hispida]4.5e-15589.77Show/hide
Query:  RVDLARKLLVHARSKLNFKPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNI
        RVDLA+KLLV+ARS+LN +PNTCIFNILVKHHCRN DLQAAFEVVKEMKSA +VSYP+LITYSTLIGGLC++GKL+EAIELFEEMVSKDKILPDALTYNI
Subjt:  RVDLARKLLVHARSKLNFKPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNI

Query:  LINGFCQGGKVDRARTIIEFMKSNGCSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRADT
        LINGFCQGGKVDRAR I+EFMKSNGCSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMK L M+PDT+SYTTL+NCLCRTGRVDEATELLQQMK +DCRADT
Subjt:  LINGFCQGGKVDRARTIIEFMKSNGCSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRADT

Query:  VTLNVMLGGLCREGRLKEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRGFVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMG
        VTLNVMLGGLCREGR +EALDMVQKLP+EGFYLNK SYRIVLNFL++KGELKRA+ELLGLMLNRGFVPHYATSNNLLVLLCN GMVNDAVESLFGLL+MG
Subjt:  VTLNVMLGGLCREGRLKEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRGFVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMG

Query:  FRP
        F+P
Subjt:  FRP

TrEMBL top hitse value%identityAlignment
A0A0A0LGW7 Uncharacterized protein1.0e-15288.12Show/hide
Query:  RVDLARKLLVHARSKLNFKPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNI
        RVDLARKLLV+ARSKLN +PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSA +VSYPNL+TYSTLIGGLC+NGKLKEAIE FEEMVSKD ILPDALTYNI
Subjt:  RVDLARKLLVHARSKLNFKPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNI

Query:  LINGFCQGGKVDRARTIIEFMKSNGCSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRADT
        LINGFCQ GKVDRARTI+EFMKSNGCSPNVFNYSVLMNG+CKEGRLQEAKEVF+E+K L M+PDT+SYTTLINCLCRTGRVDEATELLQQMK+KDCRADT
Subjt:  LINGFCQGGKVDRARTIIEFMKSNGCSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRADT

Query:  VTLNVMLGGLCREGRLKEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRGFVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMG
        VT NVMLGGLCREGR  EALDMVQKLP+EGFYLNK SYRIVLNFLT+KGEL++A+ELLGLMLNRGFVPH+ATSN LL+LLCN GMV DAVESL GLL+MG
Subjt:  VTLNVMLGGLCREGRLKEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRGFVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMG

Query:  FRP
        F+P
Subjt:  FRP

A0A1S3CQL3 pentatricopeptide repeat-containing protein At5g184754.6e-15388.12Show/hide
Query:  RVDLARKLLVHARSKLNFKPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNI
        RVDLARKLLV+ARSKLN +PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSA +VSYPNL+TYSTLIGGLC+NGKLKEAIE FEEMVSKDKILPDALTYNI
Subjt:  RVDLARKLLVHARSKLNFKPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNI

Query:  LINGFCQGGKVDRARTIIEFMKSNGCSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRADT
        LINGFCQGGKVDRAR I+EFMKSNGC PNVFNYS LMNG+CKEGRLQEAKEVF+E+K L M+PDT+SYTTLINCLCRTGRVDEATELLQQMK+KDCRADT
Subjt:  LINGFCQGGKVDRARTIIEFMKSNGCSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRADT

Query:  VTLNVMLGGLCREGRLKEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRGFVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMG
        VT NVMLGGLCREGR +EALDMVQKLP+EGFYLNK SYRIVLNFLT+KGEL+RA+ELLGLMLNRGFVPH+ATSN LL+LLCN GMV DAVESL GLL+MG
Subjt:  VTLNVMLGGLCREGRLKEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRGFVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMG

Query:  FRP
        F+P
Subjt:  FRP

A0A5A7T5D4 Pentatricopeptide repeat-containing protein4.6e-15388.12Show/hide
Query:  RVDLARKLLVHARSKLNFKPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNI
        RVDLARKLLV+ARSKLN +PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSA +VSYPNL+TYSTLIGGLC+NGKLKEAIE FEEMVSKDKILPDALTYNI
Subjt:  RVDLARKLLVHARSKLNFKPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNI

Query:  LINGFCQGGKVDRARTIIEFMKSNGCSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRADT
        LINGFCQGGKVDRAR I+EFMKSNGC PNVFNYS LMNG+CKEGRLQEAKEVF+E+K L M+PDT+SYTTLINCLCRTGRVDEATELLQQMK+KDCRADT
Subjt:  LINGFCQGGKVDRARTIIEFMKSNGCSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRADT

Query:  VTLNVMLGGLCREGRLKEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRGFVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMG
        VT NVMLGGLCREGR +EALDMVQKLP+EGFYLNK SYRIVLNFLT+KGEL+RA+ELLGLMLNRGFVPH+ATSN LL+LLCN GMV DAVESL GLL+MG
Subjt:  VTLNVMLGGLCREGRLKEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRGFVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMG

Query:  FRP
        F+P
Subjt:  FRP

A0A6J1CPA0 pentatricopeptide repeat-containing protein At5g184754.6e-16998.68Show/hide
Query:  RVDLARKLLVHARSKLNFKPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNI
        RVDLARKLLVHARSKLNFKPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNI
Subjt:  RVDLARKLLVHARSKLNFKPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNI

Query:  LINGFCQGGKVDRARTIIEFMKSNGCSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRADT
        LINGFCQGGKVDRARTIIEFMKSNGCSPN+FNYSVLMNGFCKEGRLQEAKEVFDEMKRL MRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRADT
Subjt:  LINGFCQGGKVDRARTIIEFMKSNGCSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRADT

Query:  VTLNVMLGGLCREGRLKEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRGFVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMG
        VTLNVMLGGLCREGRL+EALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRGFVPHYATSNNLLVLL NGGMVNDAVESLFGLLKMG
Subjt:  VTLNVMLGGLCREGRLKEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRGFVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMG

Query:  FRP
        FRP
Subjt:  FRP

A0A6J1FAE2 pentatricopeptide repeat-containing protein At5g18475 isoform X13.3e-15187.46Show/hide
Query:  RVDLARKLLVHARSKLNFKPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNI
        RVDLARKLLV+A SKLN  PNTCIFNILVKHHCRNG+LQAAFEVV+EMKSA +VSYPNLITYSTLIGGLC++GKLKEAIELFE MVSKDKILPDALTYNI
Subjt:  RVDLARKLLVHARSKLNFKPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNI

Query:  LINGFCQGGKVDRARTIIEFMKSNGCSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRADT
        LINGFCQGGKVDRAR I+EFMKSNGCSPNVFNYSVLMNGFCKEG+LQEAKEVF+EMK L M+PDTVSYTTL+NCLCRTGRVDEATELLQ+MK++DCRADT
Subjt:  LINGFCQGGKVDRARTIIEFMKSNGCSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRADT

Query:  VTLNVMLGGLCREGRLKEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRGFVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMG
        +TLNV+LGGLCREGR +EALDMVQKLP+EG+YLNK SYRIVLNFL++KGELKRA+ELLGLMLNRGFVPHYATSN+LLVLLCN GMV DAVESL GLL+MG
Subjt:  VTLNVMLGGLCREGRLKEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRGFVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMG

Query:  FRP
        F+P
Subjt:  FRP

SwissProt top hitse value%identityAlignment
Q0WVK7 Pentatricopeptide repeat-containing protein At1g05670, mitochondrial9.8e-4433.56Show/hide
Query:  LVHARSKLNFKPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNILINGFCQG
        L+    +   KPN+ I+  ++   CR   L  A E   EM    +   P+ + Y+TLI G CK G ++ A + F EM S+D I PD LTY  +I+GFCQ 
Subjt:  LVHARSKLNFKPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNILINGFCQG

Query:  GKVDRARTIIEFMKSNGCSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRADTVTLNVMLG
        G +  A  +   M   G  P+   ++ L+NG+CK G +++A  V + M +    P+ V+YTTLI+ LC+ G +D A ELL +M +   + +  T N ++ 
Subjt:  GKVDRARTIIEFMKSNGCSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRADTVTLNVMLG

Query:  GLCREGRLKEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRGFVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMGFRP
        GLC+ G ++EA+ +V +    G   +  +Y  +++   + GE+ +A E+L  ML +G  P   T N L+   C  GM+ D  + L  +L  G  P
Subjt:  GLCREGRLKEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRGFVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMGFRP

Q3E9F0 Pentatricopeptide repeat-containing protein At5g184752.2e-9655.96Show/hide
Query:  VDLARKLLVHARSKLNFKPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNIL
        V+L+RKLL++A+  L  +PNTCIFNILVKHHC+NGD+  AF VV+EMK  + +SYPN ITYSTL+  L  + + KEA+ELFE+M+SK+ I PD +T+N++
Subjt:  VDLARKLLVHARSKLNFKPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNIL

Query:  INGFCQGGKVDRARTIIEFMKSNGCSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRADTV
        INGFC+ G+V+RA+ I++FMK NGC+PNV+NYS LMNGFCK G++QEAK+ FDE+K+  ++ DTV YTTL+NC CR G  DEA +LL +MK   CRADT+
Subjt:  INGFCQGGKVDRARTIIEFMKSNGCSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRADTV

Query:  TLNVMLGGLCREGRLKEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRGFVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMGF
        T NV+L GL  EGR +EAL M+ +   EG +LNK SYRI+LN L   GEL++A + L +M  RG  PH+AT N L+V LC  G     V  L G L++G 
Subjt:  TLNVMLGGLCREGRLKEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRGFVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMGF

Query:  RP
         P
Subjt:  RP

Q3EDF8 Pentatricopeptide repeat-containing protein At1g099002.8e-5135.21Show/hide
Query:  PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNILINGFCQGGKVDRARTIIE
        P+   +N+++  +C+ G++  A  V+  M  +     P+++TY+T++  LC +GKLK+A+E+ + M+ +D   PD +TY ILI   C+   V  A  +++
Subjt:  PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNILINGFCQGGKVDRARTIIE

Query:  FMKSNGCSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRADTVTLNVMLGGLCREGRLKEA
         M+  GC+P+V  Y+VL+NG CKEGRL EA +  ++M     +P+ +++  ++  +C TGR  +A +LL  M  K      VT N+++  LCR+G L  A
Subjt:  FMKSNGCSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRADTVTLNVMLGGLCREGRLKEA

Query:  LDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRGFVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMGFRP
        +D+++K+P  G   N  SY  +L+   ++ ++ RA E L  M++RG  P   T N +L  LC  G V DAVE L  L   G  P
Subjt:  LDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRGFVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMGFRP

Q9FMF6 Pentatricopeptide repeat-containing protein At5g64320, mitochondrial2.0e-4432.17Show/hide
Query:  FKPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNILINGFCQGGKVDRARTI
        F P+   +  L+   C+ G + AA ++        ++  P ++ ++TLI G   +G+L +A  +  +MV+   I+PD  TYN LI G+ + G V  A  +
Subjt:  FKPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNILINGFCQGGKVDRARTI

Query:  IEFMKSNGCSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRADTVTLNVMLGGLCREGRLK
        +  M++ GC PNV++Y++L++GFCK G++ EA  V +EM    ++P+TV +  LI+  C+  R+ EA E+ ++M  K C+ D  T N ++ GLC    +K
Subjt:  IEFMKSNGCSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRADTVTLNVMLGGLCREGRLK

Query:  EALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRGFVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMGFRP
         AL +++ +  EG   N  +Y  ++N    +GE+K A +L+  M+ +G      T N+L+  LC  G V+ A      +L+ G  P
Subjt:  EALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRGFVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMGFRP

Q9SR00 Pentatricopeptide repeat-containing protein At3g04760, chloroplastic2.6e-4431.95Show/hide
Query:  RVDLARKLLVHARSKLNFKPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNI
        R+D A ++L   RSK +F P+T  +NI++   C  G L  A +V+ ++ S      P +ITY+ LI      G + EA++L +EM+S+  + PD  TYN 
Subjt:  RVDLARKLLVHARSKLNFKPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNI

Query:  LINGFCQGGKVDRARTIIEFMKSNG-----------------------------------CSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDT
        +I G C+ G VDRA  ++  ++  G                                   C PNV  YS+L+   C++G+++EA  +   MK   + PD 
Subjt:  LINGFCQGGKVDRARTIIEFMKSNG-----------------------------------CSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDT

Query:  VSYTTLINCLCRTGRVDEATELLQQMKEKDCRADTVTLNVMLGGLCREGRLKEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRG
         SY  LI   CR GR+D A E L+ M    C  D V  N +L  LC+ G+  +AL++  KL   G   N +SY  + + L   G+  RA  ++  M++ G
Subjt:  VSYTTLINCLCRTGRVDEATELLQQMKEKDCRADTVTLNVMLGGLCREGRLKEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRG

Query:  FVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMGFRP
          P   T N+++  LC  GMV++A E L  +    F P
Subjt:  FVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMGFRP

Arabidopsis top hitse value%identityAlignment
AT1G05670.1 Pentatricopeptide repeat (PPR-like) superfamily protein7.0e-4533.56Show/hide
Query:  LVHARSKLNFKPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNILINGFCQG
        L+    +   KPN+ I+  ++   CR   L  A E   EM    +   P+ + Y+TLI G CK G ++ A + F EM S+D I PD LTY  +I+GFCQ 
Subjt:  LVHARSKLNFKPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNILINGFCQG

Query:  GKVDRARTIIEFMKSNGCSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRADTVTLNVMLG
        G +  A  +   M   G  P+   ++ L+NG+CK G +++A  V + M +    P+ V+YTTLI+ LC+ G +D A ELL +M +   + +  T N ++ 
Subjt:  GKVDRARTIIEFMKSNGCSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRADTVTLNVMLG

Query:  GLCREGRLKEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRGFVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMGFRP
        GLC+ G ++EA+ +V +    G   +  +Y  +++   + GE+ +A E+L  ML +G  P   T N L+   C  GM+ D  + L  +L  G  P
Subjt:  GLCREGRLKEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRGFVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMGFRP

AT1G09900.1 Pentatricopeptide repeat (PPR-like) superfamily protein2.0e-5235.21Show/hide
Query:  PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNILINGFCQGGKVDRARTIIE
        P+   +N+++  +C+ G++  A  V+  M  +     P+++TY+T++  LC +GKLK+A+E+ + M+ +D   PD +TY ILI   C+   V  A  +++
Subjt:  PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNILINGFCQGGKVDRARTIIE

Query:  FMKSNGCSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRADTVTLNVMLGGLCREGRLKEA
         M+  GC+P+V  Y+VL+NG CKEGRL EA +  ++M     +P+ +++  ++  +C TGR  +A +LL  M  K      VT N+++  LCR+G L  A
Subjt:  FMKSNGCSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRADTVTLNVMLGGLCREGRLKEA

Query:  LDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRGFVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMGFRP
        +D+++K+P  G   N  SY  +L+   ++ ++ RA E L  M++RG  P   T N +L  LC  G V DAVE L  L   G  P
Subjt:  LDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRGFVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMGFRP

AT3G04760.1 Pentatricopeptide repeat (PPR-like) superfamily protein1.8e-4531.95Show/hide
Query:  RVDLARKLLVHARSKLNFKPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNI
        R+D A ++L   RSK +F P+T  +NI++   C  G L  A +V+ ++ S      P +ITY+ LI      G + EA++L +EM+S+  + PD  TYN 
Subjt:  RVDLARKLLVHARSKLNFKPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNI

Query:  LINGFCQGGKVDRARTIIEFMKSNG-----------------------------------CSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDT
        +I G C+ G VDRA  ++  ++  G                                   C PNV  YS+L+   C++G+++EA  +   MK   + PD 
Subjt:  LINGFCQGGKVDRARTIIEFMKSNG-----------------------------------CSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDT

Query:  VSYTTLINCLCRTGRVDEATELLQQMKEKDCRADTVTLNVMLGGLCREGRLKEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRG
         SY  LI   CR GR+D A E L+ M    C  D V  N +L  LC+ G+  +AL++  KL   G   N +SY  + + L   G+  RA  ++  M++ G
Subjt:  VSYTTLINCLCRTGRVDEATELLQQMKEKDCRADTVTLNVMLGGLCREGRLKEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRG

Query:  FVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMGFRP
          P   T N+++  LC  GMV++A E L  +    F P
Subjt:  FVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMGFRP

AT5G18475.1 Pentatricopeptide repeat (PPR) superfamily protein1.6e-9755.96Show/hide
Query:  VDLARKLLVHARSKLNFKPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNIL
        V+L+RKLL++A+  L  +PNTCIFNILVKHHC+NGD+  AF VV+EMK  + +SYPN ITYSTL+  L  + + KEA+ELFE+M+SK+ I PD +T+N++
Subjt:  VDLARKLLVHARSKLNFKPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNIL

Query:  INGFCQGGKVDRARTIIEFMKSNGCSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRADTV
        INGFC+ G+V+RA+ I++FMK NGC+PNV+NYS LMNGFCK G++QEAK+ FDE+K+  ++ DTV YTTL+NC CR G  DEA +LL +MK   CRADT+
Subjt:  INGFCQGGKVDRARTIIEFMKSNGCSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRADTV

Query:  TLNVMLGGLCREGRLKEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRGFVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMGF
        T NV+L GL  EGR +EAL M+ +   EG +LNK SYRI+LN L   GEL++A + L +M  RG  PH+AT N L+V LC  G     V  L G L++G 
Subjt:  TLNVMLGGLCREGRLKEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRGFVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMGF

Query:  RP
         P
Subjt:  RP

AT5G64320.1 Pentatricopeptide repeat (PPR) superfamily protein1.4e-4532.17Show/hide
Query:  FKPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNILINGFCQGGKVDRARTI
        F P+   +  L+   C+ G + AA ++        ++  P ++ ++TLI G   +G+L +A  +  +MV+   I+PD  TYN LI G+ + G V  A  +
Subjt:  FKPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNILINGFCQGGKVDRARTI

Query:  IEFMKSNGCSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRADTVTLNVMLGGLCREGRLK
        +  M++ GC PNV++Y++L++GFCK G++ EA  V +EM    ++P+TV +  LI+  C+  R+ EA E+ ++M  K C+ D  T N ++ GLC    +K
Subjt:  IEFMKSNGCSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRADTVTLNVMLGGLCREGRLK

Query:  EALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRGFVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMGFRP
         AL +++ +  EG   N  +Y  ++N    +GE+K A +L+  M+ +G      T N+L+  LC  G V+ A      +L+ G  P
Subjt:  EALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRGFVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMGFRP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGGGTTGATCTGGCCAGGAAGTTGCTCGTTCATGCCAGGAGTAAACTCAACTTTAAACCAAATACTTGCATTTTCAACATCTTAGTTAAACACCATTGCAGAAATGGAGA
TCTTCAAGCTGCTTTTGAAGTTGTGAAGGAAATGAAAAGTGCTACTAAAGTCTCTTATCCTAATCTAATCACCTACTCAACTCTGATCGGCGGCCTCTGCAAAAATGGAA
AACTTAAAGAAGCCATTGAACTTTTTGAGGAGATGGTTTCAAAGGACAAGATTTTGCCTGATGCCTTAACTTACAATATTCTGATCAATGGTTTTTGTCAAGGAGGGAAA
GTTGACCGTGCAAGGACAATAATAGAGTTCATGAAAAGCAATGGATGCAGTCCTAATGTATTCAATTACTCGGTCTTAATGAACGGCTTCTGTAAGGAGGGAAGACTGCA
AGAGGCCAAGGAAGTTTTCGACGAAATGAAGCGGCTCAGGATGAGGCCCGACACAGTCAGCTACACTACTCTAATCAACTGCCTCTGTAGAACCGGAAGGGTTGACGAGG
CAACAGAGTTACTCCAGCAGATGAAGGAAAAAGATTGCCGAGCCGATACCGTAACATTGAACGTGATGCTCGGAGGGCTATGCCGAGAAGGTAGGCTCAAGGAGGCTCTC
GATATGGTGCAGAAACTCCCTTATGAGGGGTTCTATCTGAACAAAGCTAGCTACAGGATTGTGTTGAATTTCCTGACTGAAAAAGGAGAATTGAAGAGGGCCAGTGAGTT
GTTGGGTCTGATGTTGAATAGGGGGTTTGTTCCTCACTATGCAACTTCAAATAATTTGCTGGTTCTTCTTTGCAATGGTGGGATGGTGAATGATGCAGTAGAATCTTTGT
TTGGGTTGTTAAAAATGGGGTTCAGACCT
mRNA sequenceShow/hide mRNA sequence
CGGGTTGATCTGGCCAGGAAGTTGCTCGTTCATGCCAGGAGTAAACTCAACTTTAAACCAAATACTTGCATTTTCAACATCTTAGTTAAACACCATTGCAGAAATGGAGA
TCTTCAAGCTGCTTTTGAAGTTGTGAAGGAAATGAAAAGTGCTACTAAAGTCTCTTATCCTAATCTAATCACCTACTCAACTCTGATCGGCGGCCTCTGCAAAAATGGAA
AACTTAAAGAAGCCATTGAACTTTTTGAGGAGATGGTTTCAAAGGACAAGATTTTGCCTGATGCCTTAACTTACAATATTCTGATCAATGGTTTTTGTCAAGGAGGGAAA
GTTGACCGTGCAAGGACAATAATAGAGTTCATGAAAAGCAATGGATGCAGTCCTAATGTATTCAATTACTCGGTCTTAATGAACGGCTTCTGTAAGGAGGGAAGACTGCA
AGAGGCCAAGGAAGTTTTCGACGAAATGAAGCGGCTCAGGATGAGGCCCGACACAGTCAGCTACACTACTCTAATCAACTGCCTCTGTAGAACCGGAAGGGTTGACGAGG
CAACAGAGTTACTCCAGCAGATGAAGGAAAAAGATTGCCGAGCCGATACCGTAACATTGAACGTGATGCTCGGAGGGCTATGCCGAGAAGGTAGGCTCAAGGAGGCTCTC
GATATGGTGCAGAAACTCCCTTATGAGGGGTTCTATCTGAACAAAGCTAGCTACAGGATTGTGTTGAATTTCCTGACTGAAAAAGGAGAATTGAAGAGGGCCAGTGAGTT
GTTGGGTCTGATGTTGAATAGGGGGTTTGTTCCTCACTATGCAACTTCAAATAATTTGCTGGTTCTTCTTTGCAATGGTGGGATGGTGAATGATGCAGTAGAATCTTTGT
TTGGGTTGTTAAAAATGGGGTTCAGACCT
Protein sequenceShow/hide protein sequence
RVDLARKLLVHARSKLNFKPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNILINGFCQGGK
VDRARTIIEFMKSNGCSPNVFNYSVLMNGFCKEGRLQEAKEVFDEMKRLRMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRADTVTLNVMLGGLCREGRLKEAL
DMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRGFVPHYATSNNLLVLLCNGGMVNDAVESLFGLLKMGFRP