CuGenDBv2

Gene ID	MS008377
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	39S ribosomal protein L41-A, mitochondrial
Genome location	scaffold4:970915..971561
RNA-Seq Expression	MS008377
Synteny	MS008377
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005762 - mitochondrial large ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR019189 - Ribosomal protein L27/L41, mitochondrial

Homology

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GenBank top hits

e value

%identity

Alignment

XP_002513969.1 39S ribosomal protein L41-A, mitochondrial [Ricinus communis]

1.8e-30

94.29

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Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYIVPDLTDFK
        MALGLILG+GRA RRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYV+VPEKLPNY+VPDLTDFK
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYIVPDLTDFK

XP_015571444.1 39S ribosomal protein L41-A, mitochondrial-like [Ricinus communis]

1.8e-30

94.29

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Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYIVPDLTDFK
        MALGLILG+GRA RRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYV+VPEKLPNY+VPDLTDFK
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYIVPDLTDFK

XP_021677691.1 39S ribosomal protein L41-A, mitochondrial-like [Hevea brasiliensis]

1.4e-30

95.71

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Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYIVPDLTDFK
        M LGLILG+GRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYV+VPEKLPNYIVPDLTDFK
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYIVPDLTDFK

XP_022143129.1 39S ribosomal protein L41-A, mitochondrial [Momordica charantia]

1.6e-31

100

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Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYIVPDLTDFK
        MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYIVPDLTDFK
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYIVPDLTDFK

XP_038897038.1 39S ribosomal protein L41-A, mitochondrial-like [Benincasa hispida]

2.1e-31

98.57

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Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYIVPDLTDFK
        MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNY+VPDLTDFK
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYIVPDLTDFK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KBX4 Uncharacterized protein

8.7e-31

95.71

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Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYIVPDLTDFK
        MALGLILGLGR MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNY+VPDL+DFK
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYIVPDLTDFK

A0A2C9U139 Uncharacterized protein

8.7e-31

94.29

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Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYIVPDLTDFK
        M LGLILG+GRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYV+VPEKLPNY+VPDLTDFK
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYIVPDLTDFK

A0A5A7UUA4 39S ribosomal protein L41-A

8.7e-31

95.71

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Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYIVPDLTDFK
        MALGLILGLGR MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNY+VPDL+DFK
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYIVPDLTDFK

A0A6J1CNE9 39S ribosomal protein L41-A, mitochondrial

7.8e-32

100

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Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYIVPDLTDFK
        MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYIVPDLTDFK
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYIVPDLTDFK

B9RJQ0 Uncharacterized protein

8.7e-31

94.29

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Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYIVPDLTDFK
        MALGLILG+GRA RRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYV+VPEKLPNY+VPDLTDFK
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYIVPDLTDFK

SwissProt top hits

e value

%identity

Alignment

Q5BJX1 39S ribosomal protein L41, mitochondrial

4.6e-05

45.65

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Query:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYIVPDLTDFK
        +SKR PR + K +  K TGF+T +  +V + E +P ++VPDLT FK
Subjt:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYIVPDLTDFK

Q6DJI4 39S ribosomal protein L41-A, mitochondrial

3.5e-05

38.24

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Query:  LGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYIVPDLTDFK
        +GLI  + R + R      +  +SK+ P  Y KG+  K  G+ T  G +V V E +P ++VPDLT FK
Subjt:  LGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYIVPDLTDFK

Q6INF3 39S ribosomal protein L41-B, mitochondrial

6.0e-05

38.24

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Query:  LGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYIVPDLTDFK
        +GLI  + R + R      +  +SK  P  Y KG+  K  G+ T  G +V V E +P ++VPDLT FK
Subjt:  LGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYIVPDLTDFK

Q9CQN7 39S ribosomal protein L41, mitochondrial

4.6e-05

43.48

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Query:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYIVPDLTDFK
        +SKR PR + K +  K TG +T    +V + E +P ++VPDLT FK
Subjt:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYIVPDLTDFK

Arabidopsis top hits

e value

%identity

Alignment

AT4G09012.1 Mitochondrial ribosomal protein L27

9.8e-27

78.57

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Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYIVPDLTDFK
        M LGL+ G+GR  RRKR SSLDILS KRAPRD+YKGKNCKP GFHTRK GYVV P+KLPNY+VPDLT FK
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYIVPDLTDFK

AT5G39800.1 Mitochondrial ribosomal protein L27

3.6e-29

82.09

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Query:  GLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYIVPDLTDFK
        GL++G+GR+ RRKR+SSLDILS KRAPRD+YKGKNCKPTGFHTRKGGYVV P+KLPNY+VPDLT FK
Subjt:  GLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYIVPDLTDFK

AT5G40080.1 Mitochondrial ribosomal protein L27

4.7e-29

82.09

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Query:  GLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYIVPDLTDFK
        GL++G+GR+ RRKR SSLDILS KRAPRD+YKGKNCKPTGFHTRKGGYVV P+KLPNY+VPDLT FK
Subjt:  GLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYIVPDLTDFK

Sequences

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CDS sequence

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ATGGCGTTGGGATTGATATTGGGACTCGGAAGAGCGATGCGGAGGAAGCGTACGTCTTCTCTGGACATTCTTTCGTCGAAACGAGCTCCACGGGATTATTACAAGGGCAA
GAACTGCAAGCCTACTGGTTTTCATACGCGCAAAGGTGGATACGTAGTGGTGCCAGAAAAACTGCCTAACTATATCGTTCCTGATTTGACTGATTTCAAG

mRNA sequence

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Protein sequence

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MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYIVPDLTDFK

MS008377 (gene) of Bitter gourd (TR) v1 genome