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MS008393 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008393
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold4:1069671..1070315
RNA-Seq ExpressionMS008393
SyntenyMS008393
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAT78508.1 hypothetical protein VIGAN_02119300 [Vigna angularis var. angularis]2.3e-1233.05Show/hide
Query:  MFHWKFECPFRLLLVHHKLSLDLTYSQQWIPIHQFENPLPIIFNHNSEVIRILRYSISEILWNPKQRPTVVDFAQWNPLIRRHHQQFPHSSNSVHLHGVH
        + H K + P   +LV+++L L  T+ ++ +P+HQ ++PL +  N   E +R+    ++EI+ + K+   VVDFAQ N + R HH++F +  ++V  H VH
Subjt:  MFHWKFECPFRLLLVHHKLSLDLTYSQQWIPIHQFENPLPIIFNHNSEVIRILRYSISEILWNPKQRPTVVDFAQWNPLIRRHHQQFPHSSNSVHLHGVH

Query:  NPSLFLDQPLHELRKSEP
           L  ++ LHE+ +++P
Subjt:  NPSLFLDQPLHELRKSEP

KAA0038704.1 hypothetical protein E6C27_scaffold92G002480 [Cucumis melo var. makuwa]8.5e-1560.24Show/hide
Query:  VALDGSSHFATSRKAEFAVELAGIVEANNVLRLLQEEILGPEKKPEEGIRFDDSLEVGDATGFRLHELDPRAFAFLAFLLELL
        +A + SS FATS KA+FA++LAGI+E  NVLRLL +EILG +K+ EEGI  +D+LEV +A GF L+EL  RAF  LAFL E L
Subjt:  VALDGSSHFATSRKAEFAVELAGIVEANNVLRLLQEEILGPEKKPEEGIRFDDSLEVGDATGFRLHELDPRAFAFLAFLLELL

KCW66536.1 hypothetical protein EUGRSUZ_F00333 [Eucalyptus grandis]1.4e-3644.27Show/hide
Query:  MFHWKFECPFRLLLVHHKLSLDLTYSQQWIPIHQFENPLPIIFNHNSEVIRILRYSISEILWNPKQRPTVVDFAQWNPLIRRHHQQFPHSSNSVHLHGVH
        M H + +   R + + H+L LDL + Q  +PIH+ E+  PI+  ++ +V+RIL+  I EIL NP+Q P V++  Q + L+  HH+Q PH ++ V LH V 
Subjt:  MFHWKFECPFRLLLVHHKLSLDLTYSQQWIPIHQFENPLPIIFNHNSEVIRILRYSISEILWNPKQRPTVVDFAQWNPLIRRHHQQFPHSSNSVHLHGVH

Query:  NPSLFLDQPLHELRKSEPHFPVGVTVGFKKERVALDGSSHFATSRKAEFAVELAGIVEANNVLRLLQEEILGPEKKPEEGIRFDDSLEVGDA
        +P L L+Q LHE R+ EPH  VGV V  ++ERVAL+G+   A+  +AE AVELAG+VEA + LRL  EE   P ++ E G+  D+ LE G+A
Subjt:  NPSLFLDQPLHELRKSEPHFPVGVTVGFKKERVALDGSSHFATSRKAEFAVELAGIVEANNVLRLLQEEILGPEKKPEEGIRFDDSLEVGDA

PON47377.1 hypothetical protein PanWU01x14_244610 [Parasponia andersonii]4.1e-4946.95Show/hide
Query:  MFHWKFECPFRLLLVHHKLSLDLTYSQQWIPIHQFENPLPIIFNHNSEVIRILRYSISEILWNPKQRPTVVDFAQWNPLIRRHHQQFPHSSNSVHLHGVH
        MFH + E P   LL++HKL+L   +SQ  +PIHQF+N  PII NHN +VI + R  + EI+ NPKQ+P +++F Q NPL   HHQQ  + SN +HLHG+H
Subjt:  MFHWKFECPFRLLLVHHKLSLDLTYSQQWIPIHQFENPLPIIFNHNSEVIRILRYSISEILWNPKQRPTVVDFAQWNPLIRRHHQQFPHSSNSVHLHGVH

Query:  NPSLFLDQPLHELRKSEPHFPVGVTVGFKKERVALDGSSHFATSRKAEFAVELAGIVEANNVLRLLQEEILGPEKKPEEGIRFDDSLEVGDATGFRLHEL
        N  L   + LHE+ + EPH  V V +  + +R+ALD   H +++ ++E AVEL+GIV+A NV+ LL EE+LGP+++ EEG+  DD+L+  D+ G  L +L
Subjt:  NPSLFLDQPLHELRKSEPHFPVGVTVGFKKERVALDGSSHFATSRKAEFAVELAGIVEANNVLRLLQEEILGPEKKPEEGIRFDDSLEVGDATGFRLHEL

Query:  DPRAFAFLAFLLE
          RAF  L  L E
Subjt:  DPRAFAFLAFLLE

PON50357.1 hypothetical protein TorRG33x02_314870 [Trema orientale]8.2e-5047.42Show/hide
Query:  MFHWKFECPFRLLLVHHKLSLDLTYSQQWIPIHQFENPLPIIFNHNSEVIRILRYSISEILWNPKQRPTVVDFAQWNPLIRRHHQQFPHSSNSVHLHGVH
        MFH + E P  LLL++HKL+L   + Q  +PIHQF+N  PII NHN +VIR+ R  + EI+ NPKQ+P +++  Q NPL   HHQQ  + SN +HLHG+H
Subjt:  MFHWKFECPFRLLLVHHKLSLDLTYSQQWIPIHQFENPLPIIFNHNSEVIRILRYSISEILWNPKQRPTVVDFAQWNPLIRRHHQQFPHSSNSVHLHGVH

Query:  NPSLFLDQPLHELRKSEPHFPVGVTVGFKKERVALDGSSHFATSRKAEFAVELAGIVEANNVLRLLQEEILGPEKKPEEGIRFDDSLEVGDATGFRLHEL
        N  L  ++ LHE+ + EPH  V V +  + +R+ALD   H +++ ++E AVEL+GIVEA NV+ LL EE+LGP+++ EEG+  DD+L+  D+ G  L +L
Subjt:  NPSLFLDQPLHELRKSEPHFPVGVTVGFKKERVALDGSSHFATSRKAEFAVELAGIVEANNVLRLLQEEILGPEKKPEEGIRFDDSLEVGDATGFRLHEL

Query:  DPRAFAFLAFLLE
          RAF  L  L E
Subjt:  DPRAFAFLAFLLE

TrEMBL top hitse value%identityAlignment
A0A059BKZ7 Uncharacterized protein6.5e-3744.27Show/hide
Query:  MFHWKFECPFRLLLVHHKLSLDLTYSQQWIPIHQFENPLPIIFNHNSEVIRILRYSISEILWNPKQRPTVVDFAQWNPLIRRHHQQFPHSSNSVHLHGVH
        M H + +   R + + H+L LDL + Q  +PIH+ E+  PI+  ++ +V+RIL+  I EIL NP+Q P V++  Q + L+  HH+Q PH ++ V LH V 
Subjt:  MFHWKFECPFRLLLVHHKLSLDLTYSQQWIPIHQFENPLPIIFNHNSEVIRILRYSISEILWNPKQRPTVVDFAQWNPLIRRHHQQFPHSSNSVHLHGVH

Query:  NPSLFLDQPLHELRKSEPHFPVGVTVGFKKERVALDGSSHFATSRKAEFAVELAGIVEANNVLRLLQEEILGPEKKPEEGIRFDDSLEVGDA
        +P L L+Q LHE R+ EPH  VGV V  ++ERVAL+G+   A+  +AE AVELAG+VEA + LRL  EE   P ++ E G+  D+ LE G+A
Subjt:  NPSLFLDQPLHELRKSEPHFPVGVTVGFKKERVALDGSSHFATSRKAEFAVELAGIVEANNVLRLLQEEILGPEKKPEEGIRFDDSLEVGDA

A0A0A0LHJ5 Uncharacterized protein1.1e-7366.05Show/hide
Query:  MFHWKFECPFRLLLVHHKLSLDLTYSQQWIPIHQFENPLPIIFNHNSEVIRILRYSISEILWNPKQRPTVVDFAQWNPLIRRHHQQFPHSSNSVHLHGVH
        MFH K E PF L+LVHHKLSL+LT SQ+ +PIHQF++PLPIIFNH SEVIRIL +SIS+ILWN K RP  +DF QWN  IRRHHQQ P SSN +HLH VH
Subjt:  MFHWKFECPFRLLLVHHKLSLDLTYSQQWIPIHQFENPLPIIFNHNSEVIRILRYSISEILWNPKQRPTVVDFAQWNPLIRRHHQQFPHSSNSVHLHGVH

Query:  NPSLFLDQPLHELRKSEPHFPVGVTVGFKKERVALDGSSHFATSRKAEFAVELAGIVEANNVLRLLQEEILGPEKKPEEGIRFDDSLEVGDATGFRLHEL
        N  LFL Q LHELRKS+PHFP+GVT+GF+K+R+A + SS FATS KA+FA+ELAGI+E  N+LRLL E+ILG +K+ E+GI  +D+LEV +A  F L EL
Subjt:  NPSLFLDQPLHELRKSEPHFPVGVTVGFKKERVALDGSSHFATSRKAEFAVELAGIVEANNVLRLLQEEILGPEKKPEEGIRFDDSLEVGDATGFRLHEL

Query:  DPRAFAFLAFLLELL
          RA  FLAFL E L
Subjt:  DPRAFAFLAFLLELL

A0A2P5BF08 Uncharacterized protein2.0e-4946.95Show/hide
Query:  MFHWKFECPFRLLLVHHKLSLDLTYSQQWIPIHQFENPLPIIFNHNSEVIRILRYSISEILWNPKQRPTVVDFAQWNPLIRRHHQQFPHSSNSVHLHGVH
        MFH + E P   LL++HKL+L   +SQ  +PIHQF+N  PII NHN +VI + R  + EI+ NPKQ+P +++F Q NPL   HHQQ  + SN +HLHG+H
Subjt:  MFHWKFECPFRLLLVHHKLSLDLTYSQQWIPIHQFENPLPIIFNHNSEVIRILRYSISEILWNPKQRPTVVDFAQWNPLIRRHHQQFPHSSNSVHLHGVH

Query:  NPSLFLDQPLHELRKSEPHFPVGVTVGFKKERVALDGSSHFATSRKAEFAVELAGIVEANNVLRLLQEEILGPEKKPEEGIRFDDSLEVGDATGFRLHEL
        N  L   + LHE+ + EPH  V V +  + +R+ALD   H +++ ++E AVEL+GIV+A NV+ LL EE+LGP+++ EEG+  DD+L+  D+ G  L +L
Subjt:  NPSLFLDQPLHELRKSEPHFPVGVTVGFKKERVALDGSSHFATSRKAEFAVELAGIVEANNVLRLLQEEILGPEKKPEEGIRFDDSLEVGDATGFRLHEL

Query:  DPRAFAFLAFLLE
          RAF  L  L E
Subjt:  DPRAFAFLAFLLE

A0A2P5BNH1 Uncharacterized protein4.0e-5047.42Show/hide
Query:  MFHWKFECPFRLLLVHHKLSLDLTYSQQWIPIHQFENPLPIIFNHNSEVIRILRYSISEILWNPKQRPTVVDFAQWNPLIRRHHQQFPHSSNSVHLHGVH
        MFH + E P  LLL++HKL+L   + Q  +PIHQF+N  PII NHN +VIR+ R  + EI+ NPKQ+P +++  Q NPL   HHQQ  + SN +HLHG+H
Subjt:  MFHWKFECPFRLLLVHHKLSLDLTYSQQWIPIHQFENPLPIIFNHNSEVIRILRYSISEILWNPKQRPTVVDFAQWNPLIRRHHQQFPHSSNSVHLHGVH

Query:  NPSLFLDQPLHELRKSEPHFPVGVTVGFKKERVALDGSSHFATSRKAEFAVELAGIVEANNVLRLLQEEILGPEKKPEEGIRFDDSLEVGDATGFRLHEL
        N  L  ++ LHE+ + EPH  V V +  + +R+ALD   H +++ ++E AVEL+GIVEA NV+ LL EE+LGP+++ EEG+  DD+L+  D+ G  L +L
Subjt:  NPSLFLDQPLHELRKSEPHFPVGVTVGFKKERVALDGSSHFATSRKAEFAVELAGIVEANNVLRLLQEEILGPEKKPEEGIRFDDSLEVGDATGFRLHEL

Query:  DPRAFAFLAFLLE
          RAF  L  L E
Subjt:  DPRAFAFLAFLLE

A0A5D3E6P3 Uncharacterized protein4.1e-1560.24Show/hide
Query:  VALDGSSHFATSRKAEFAVELAGIVEANNVLRLLQEEILGPEKKPEEGIRFDDSLEVGDATGFRLHELDPRAFAFLAFLLELL
        +A + SS FATS KA+FA++LAGI+E  NVLRLL +EILG +K+ EEGI  +D+LEV +A GF L+EL  RAF  LAFL E L
Subjt:  VALDGSSHFATSRKAEFAVELAGIVEANNVLRLLQEEILGPEKKPEEGIRFDDSLEVGDATGFRLHELDPRAFAFLAFLLELL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCACTGGAAATTTGAATGCCCTTTTCGCCTTCTCCTCGTTCACCACAAACTCTCTCTCGATCTGACTTACAGCCAACAATGGATCCCAATTCACCAATTCGAGAA
TCCTCTTCCCATCATCTTCAACCACAACTCTGAAGTAATTCGGATACTTCGCTACTCGATCTCTGAAATCCTCTGGAATCCCAAACAGCGACCTACAGTGGTAGATTTTG
CTCAATGGAATCCGCTTATTCGCCGACATCATCAGCAATTTCCGCACAGTTCTAACTCGGTCCATCTCCATGGAGTCCATAATCCGTCTCTCTTCCTCGATCAACCCCTC
CATGAACTCCGTAAATCCGAACCACATTTTCCCGTCGGCGTGACGGTAGGGTTCAAAAAGGAGCGGGTGGCGCTCGATGGATCGAGCCACTTTGCGACCTCTCGGAAAGC
CGAGTTCGCGGTAGAGCTTGCCGGCATCGTCGAGGCGAACAACGTGCTCCGGCTGCTTCAAGAGGAAATCCTTGGACCTGAAAAGAAACCTGAAGAAGGAATCCGCTTCG
ACGATTCGCTCGAAGTGGGAGACGCGACTGGATTCCGATTGCACGAGCTTGATCCTAGGGCTTTCGCGTTTCTTGCGTTTCTTCTTGAACTTCTT
mRNA sequenceShow/hide mRNA sequence
ATGTTTCACTGGAAATTTGAATGCCCTTTTCGCCTTCTCCTCGTTCACCACAAACTCTCTCTCGATCTGACTTACAGCCAACAATGGATCCCAATTCACCAATTCGAGAA
TCCTCTTCCCATCATCTTCAACCACAACTCTGAAGTAATTCGGATACTTCGCTACTCGATCTCTGAAATCCTCTGGAATCCCAAACAGCGACCTACAGTGGTAGATTTTG
CTCAATGGAATCCGCTTATTCGCCGACATCATCAGCAATTTCCGCACAGTTCTAACTCGGTCCATCTCCATGGAGTCCATAATCCGTCTCTCTTCCTCGATCAACCCCTC
CATGAACTCCGTAAATCCGAACCACATTTTCCCGTCGGCGTGACGGTAGGGTTCAAAAAGGAGCGGGTGGCGCTCGATGGATCGAGCCACTTTGCGACCTCTCGGAAAGC
CGAGTTCGCGGTAGAGCTTGCCGGCATCGTCGAGGCGAACAACGTGCTCCGGCTGCTTCAAGAGGAAATCCTTGGACCTGAAAAGAAACCTGAAGAAGGAATCCGCTTCG
ACGATTCGCTCGAAGTGGGAGACGCGACTGGATTCCGATTGCACGAGCTTGATCCTAGGGCTTTCGCGTTTCTTGCGTTTCTTCTTGAACTTCTT
Protein sequenceShow/hide protein sequence
MFHWKFECPFRLLLVHHKLSLDLTYSQQWIPIHQFENPLPIIFNHNSEVIRILRYSISEILWNPKQRPTVVDFAQWNPLIRRHHQQFPHSSNSVHLHGVHNPSLFLDQPL
HELRKSEPHFPVGVTVGFKKERVALDGSSHFATSRKAEFAVELAGIVEANNVLRLLQEEILGPEKKPEEGIRFDDSLEVGDATGFRLHELDPRAFAFLAFLLELL