CuGenDBv2

Gene ID	MS008405
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ATP synthase subunit a, chloroplastic
Genome location	scaffold4:1155064..1155336
RNA-Seq Expression	MS008405
Synteny	MS008405
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0005886 - plasma membrane (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) (cellular component) GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
InterPro domains	IPR000568 - ATP synthase, F0 complex, subunit A IPR035908 - ATP synthase, F0 complex, subunit A superfamily IPR045082 - ATP synthase, F0 complex, subunit A, bacterial/chloroplast

Homology

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GenBank top hits

e value

%identity

Alignment

AFU97004.1 AtpI, partial [Averrhoa carambola]

5.5e-32

93.59

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Query:  PIKNIYSPHGELAAPTNDINTTVVLALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN
        P K I  PHGELAAPTNDINTTV LALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN
Subjt:  PIKNIYSPHGELAAPTNDINTTVVLALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN

QHB74935.1 ATP synthase CF0 subunit IV [Brunellia trianae]

2.5e-32

93.59

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Query:  PIKNIYSPHGELAAPTNDINTTVVLALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN
        P K I+ PHGELAAPTNDINTTV LALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN
Subjt:  PIKNIYSPHGELAAPTNDINTTVVLALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN

QRN71791.1 ATP synthase CF0 subunit IV [Phanera variegata var. variegata]

5.5e-32

93.59

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Query:  PIKNIYSPHGELAAPTNDINTTVVLALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN
        P K I  PHGELAAPTNDINTTV LALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN
Subjt:  PIKNIYSPHGELAAPTNDINTTVVLALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN

QXI85908.1 ATP synthase CF0 subunit IV [Gentiana szechenyii]

4.2e-32

91.03

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Query:  PIKNIYSPHGELAAPTNDINTTVVLALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN
        P+K I  PHGELAAPTNDINTTV LALLTS+AYFYAGL+KKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN
Subjt:  PIKNIYSPHGELAAPTNDINTTVVLALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN

YP_009338618.1 ATPase subunit IV [Averrhoa carambola]

5.5e-32

93.59

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Query:  PIKNIYSPHGELAAPTNDINTTVVLALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN
        P K I  PHGELAAPTNDINTTV LALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN
Subjt:  PIKNIYSPHGELAAPTNDINTTVVLALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN

TrEMBL top hits

e value

%identity

Alignment

A0A161CIL3 ATP synthase subunit a, chloroplastic

2.7e-32

93.59

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Query:  PIKNIYSPHGELAAPTNDINTTVVLALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN
        P K I  PHGELAAPTNDINTTV LALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN
Subjt:  PIKNIYSPHGELAAPTNDINTTVVLALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN

A0A1B2CXU0 ATP synthase subunit a, chloroplastic

2.7e-32

93.59

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Query:  PIKNIYSPHGELAAPTNDINTTVVLALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN
        P K I  PHGELAAPTNDINTTV LALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN
Subjt:  PIKNIYSPHGELAAPTNDINTTVVLALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN

A0A6B9LZ31 ATP synthase subunit a, chloroplastic

1.2e-32

93.59

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Query:  PIKNIYSPHGELAAPTNDINTTVVLALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN
        P K I+ PHGELAAPTNDINTTV LALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN
Subjt:  PIKNIYSPHGELAAPTNDINTTVVLALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN

A0A6B9M860 ATP synthase subunit a, chloroplastic

1.2e-32

93.59

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Query:  PIKNIYSPHGELAAPTNDINTTVVLALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN
        P K I+ PHGELAAPTNDINTTV LALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN
Subjt:  PIKNIYSPHGELAAPTNDINTTVVLALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN

M1JE33 ATP synthase CF0 subunit IV

2.7e-32

93.59

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Query:  PIKNIYSPHGELAAPTNDINTTVVLALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN
        P K I  PHGELAAPTNDINTTV LALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN
Subjt:  PIKNIYSPHGELAAPTNDINTTVVLALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN

SwissProt top hits

e value

%identity

Alignment

A4GYP6 ATP synthase subunit a, chloroplastic

9.5e-35

93.59

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Query:  PIKNIYSPHGELAAPTNDINTTVVLALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN
        P K I  PHGELAAPTNDINTTV LALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN
Subjt:  PIKNIYSPHGELAAPTNDINTTVVLALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN

A7Y3B0 ATP synthase subunit a, chloroplastic

1.2e-34

92.31

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Query:  PIKNIYSPHGELAAPTNDINTTVVLALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN
        P K I  PHGELAAPTNDINTTV LALLTS+AYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN
Subjt:  PIKNIYSPHGELAAPTNDINTTVVLALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN

Q0G9X4 ATP synthase subunit a, chloroplastic

1.6e-34

91.03

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Query:  PIKNIYSPHGELAAPTNDINTTVVLALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN
        P K I  PHGELAAPTNDINTTV LALLTS+AYFYAG+SKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN
Subjt:  PIKNIYSPHGELAAPTNDINTTVVLALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN

Q14FG9 ATP synthase subunit a, chloroplastic

9.5e-35

93.59

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Query:  PIKNIYSPHGELAAPTNDINTTVVLALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN
        P K I  PHGELAAPTNDINTTV LALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN
Subjt:  PIKNIYSPHGELAAPTNDINTTVVLALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN

Q56P09 ATP synthase subunit a, chloroplastic

9.5e-35

92.31

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Query:  PIKNIYSPHGELAAPTNDINTTVVLALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN
        P K I  PHGELAAPTNDINTTV LALLTS+AYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN
Subjt:  PIKNIYSPHGELAAPTNDINTTVVLALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN

Arabidopsis top hits

e value

%identity

Alignment

ATCG00150.1 ATPase, F0 complex, subunit A protein

2.8e-34

89.74

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Query:  PIKNIYSPHGELAAPTNDINTTVVLALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN
        P K I  P GELAAPTNDINTTV LALLTS+AYFYAGLSKKGLGYF KYIQPTPILLPINILEDFTKPLSLSFRLFGN
Subjt:  PIKNIYSPHGELAAPTNDINTTVVLALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN

Sequences

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CDS sequence

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TTAGAATTAATGAAAACCGAACATAATCATTTAATCAACCCTATCAAGAATATTTATTCACCTCACGGAGAGTTAGCCGCACCCACAAATGATATAAATACTACCGTTGT
TTTAGCTTTACTCACATCAATAGCATATTTCTATGCGGGTCTTAGCAAAAAAGGATTAGGTTATTTCGGTAAATACATTCAACCAACTCCAATCCTTTTACCCATTAACA
TCTTAGAAGATTTCACAAAACCCTTATCACTTAGTTTTCGACTTTTCGGAAAT

mRNA sequence

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Protein sequence

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LELMKTEHNHLINPIKNIYSPHGELAAPTNDINTTVVLALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGN

MS008405 (gene) of Bitter gourd (TR) v1 genome