CuGenDBv2

Gene ID	MS008423
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Omega-protein
Genome location	scaffold4:1304710..1314340
RNA-Seq Expression	MS008423
Synteny	MS008423
Gene Ontology terms	GO:0006265 - DNA topological change (biological process) GO:0005694 - chromosome (cellular component) GO:0003677 - DNA binding (molecular function) GO:0003917 - DNA topoisomerase type I activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR000380 - DNA topoisomerase, type IA IPR003602 - DNA topoisomerase, type IA, DNA-binding domain IPR013497 - DNA topoisomerase, type IA, central IPR013498 - DNA topoisomerase, type IA, zn finger IPR013824 - DNA topoisomerase, type IA, central region, subdomain 1 IPR013825 - DNA topoisomerase, type IA, central region, subdomain 2 IPR013826 - DNA topoisomerase, type IA, central region, subdomain 3 IPR023405 - DNA topoisomerase, type IA, core domain IPR025589 - Topoisomerase C-terminal repeat

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022144286.1 uncharacterized protein LOC111013976 [Momordica charantia]

3.6e-236

83.46

Show/hide

Query:  RYGQNFVSESARKYFKKVKNAQEAHEAIRPTDVQQLPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLANESIIFRSTCSRVQFRGFQEV
        RYGQNFVSESARKYFKKVKNAQEAHEAIRPTDVQQLPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLANESIIFRSTCSRVQFRGFQEV
Subjt:  RYGQNFVSESARKYFKKVKNAQEAHEAIRPTDVQQLPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLANESIIFRSTCSRVQFRGFQEV

Query:  FEGSLYPLPLVSVFLSALIDFEYNLFVSYKKCKDLIICQDPEADAVRQKDHEENGREELFRILNALQPGDQLSLSAVELKQHFTQPPPRYSEGTL-----
        FE                                     DPEADAVRQKDHEENGREELFRILNALQPGDQLSLS VELKQHFTQPPPRYSEGTL     
Subjt:  FEGSLYPLPLVSVFLSALIDFEYNLFVSYKKCKDLIICQDPEADAVRQKDHEENGREELFRILNALQPGDQLSLSAVELKQHFTQPPPRYSEGTL-----

Query:  --------------------------------------VSAFLCHHFSEVTDYSFTADMETELDNVSAGLTEWKGLLRDYWTRFSSYCELANSVHIHQVE
                                              VSAFLCHHFSEVTDYSFTADMETELDNVSAGLTEWKGLLRDYWTRFSSYCELANSVHIHQVE
Subjt:  --------------------------------------VSAFLCHHFSEVTDYSFTADMETELDNVSAGLTEWKGLLRDYWTRFSSYCELANSVHIHQVE

Query:  KMLEKKFGDFLFSFLPDNCRTCPSCLEGTLIFKVSRFGAGYFIGCDQHPKCKYIAKTLYGEDEEEVTPQNNNSVEEPKLLGLHPVSNEKILLKSGPYGFY
        KMLEKKFGDFLFSFLPDNCRTCPSCLEGTLIFKVSRFGAGYFIGCDQHPKCKYIAKTLYGED EEVTPQNNNSVEEPKLLGLHPVSNEKILLKSGPYGFY
Subjt:  KMLEKKFGDFLFSFLPDNCRTCPSCLEGTLIFKVSRFGAGYFIGCDQHPKCKYIAKTLYGEDEEEVTPQNNNSVEEPKLLGLHPVSNEKILLKSGPYGFY

Query:  VQLGEDRKGYLPKRASVSQIKHVDSITLEDALELLRYPITLGNHPKDGQPVIIKIAKAGFSVRHRRTIATVPKNLKPNGITLEKALELLSSNDVRRCGRP
        VQLGEDRKGYLPKRASVSQIKHVDSITLEDALELLRYPITLGNHPKDGQPVIIKIAKAGFSVRHRRTIAT+PKNLKPNGITLEKALELLSSNDVRRCGRP
Subjt:  VQLGEDRKGYLPKRASVSQIKHVDSITLEDALELLRYPITLGNHPKDGQPVIIKIAKAGFSVRHRRTIATVPKNLKPNGITLEKALELLSSNDVRRCGRP

Query:  KSNPKVEE
        KS PKVEE
Subjt:  KSNPKVEE

XP_022936881.1 uncharacterized protein LOC111443338 isoform X1 [Cucurbita moschata]

5.8e-218

76.38

Show/hide

Query:  RYGQNFVSESARKYFKKVKNAQEAHEAIRPTDVQQLPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLANESIIFRSTCSRVQFRGFQEV
        RYG+NFVSESARKYFKKVKNAQEAHEAIRPTDVQ+LPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLA+ESIIFRSTCSRVQFRGFQEV
Subjt:  RYGQNFVSESARKYFKKVKNAQEAHEAIRPTDVQQLPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLANESIIFRSTCSRVQFRGFQEV

Query:  FEGSLYPLPLVSVFLSALIDFEYNLFVSYKKCKDLIICQDPEADAVRQKDHEENGREELFRILNALQPGDQLSLSAVELKQHFTQPPPRYSEGTL-----
        FE                                     DPE DA+R KDHEEN R+ELFRILNAL+ GDQLSL+AVELKQHFTQPPPRYSEGTL     
Subjt:  FEGSLYPLPLVSVFLSALIDFEYNLFVSYKKCKDLIICQDPEADAVRQKDHEENGREELFRILNALQPGDQLSLSAVELKQHFTQPPPRYSEGTL-----

Query:  --------------------------------------VSAFLCHHFSEVTDYSFTADMETELDNVSAGLTEWKGLLRDYWTRFSSYCELANSVHIHQVE
                                              VSAFLCHHFSEVTDYSFTADME ELDNVSAGLTEWKGLL+DYWTRFS+YCE AN+VHIHQVE
Subjt:  --------------------------------------VSAFLCHHFSEVTDYSFTADMETELDNVSAGLTEWKGLLRDYWTRFSSYCELANSVHIHQVE

Query:  KMLEKKFGDFLFSFLPDNCRTCPSCLEGTLIFKVSRFGAGYFIGCDQHPKCKYIAKTLYGEDEEEVTPQNNNSVEEPKLLGLHPVSNEKILLKSGPYGFY
        KMLEKK+ DFLFSFLPDNCR+CPSC EGTLIFKVSR+GAGYFIGCDQHP+CKYIAKTLYGEDEEEVTPQNN SVEEPKLLGLHPVS+EKILLKSGPYGFY
Subjt:  KMLEKKFGDFLFSFLPDNCRTCPSCLEGTLIFKVSRFGAGYFIGCDQHPKCKYIAKTLYGEDEEEVTPQNNNSVEEPKLLGLHPVSNEKILLKSGPYGFY

Query:  VQLGEDRKGYLPKRASVSQIKHVDSITLEDALELLRYPITLGNHPKDGQPVIIKIAKAGFSVRHRRTIATVPKNLKPNGITLEKALELLSSNDVRRCGRP
        VQLGEDRKGY+PKR SVSQIK VDSITLEDALELLRYPITLGNHPKDGQ V+IKI KAGF+VRHRRTIA+VPKNLKPN + L KALELLSS DVRRCGRP
Subjt:  VQLGEDRKGYLPKRASVSQIKHVDSITLEDALELLRYPITLGNHPKDGQPVIIKIAKAGFSVRHRRTIATVPKNLKPNGITLEKALELLSSNDVRRCGRP

Query:  KSNPKVEE
        KS  K EE
Subjt:  KSNPKVEE

XP_022976242.1 uncharacterized protein LOC111476696 isoform X1 [Cucurbita maxima]

4.0e-219

76.97

Show/hide

Query:  RYGQNFVSESARKYFKKVKNAQEAHEAIRPTDVQQLPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLANESIIFRSTCSRVQFRGFQEV
        RYG NFVSESARKYFKKVKNAQEAHEAIRPTDVQ+LPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLA+ESIIFRSTCSRVQFRGFQEV
Subjt:  RYGQNFVSESARKYFKKVKNAQEAHEAIRPTDVQQLPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLANESIIFRSTCSRVQFRGFQEV

Query:  FEGSLYPLPLVSVFLSALIDFEYNLFVSYKKCKDLIICQDPEADAVRQKDHEENGREELFRILNALQPGDQLSLSAVELKQHFTQPPPRYSEGTL-----
        FE                                     DPE DA+R KDHEEN R+ELFRILNAL+ GDQLSL+AVELKQHFTQPPPRYSEGTL     
Subjt:  FEGSLYPLPLVSVFLSALIDFEYNLFVSYKKCKDLIICQDPEADAVRQKDHEENGREELFRILNALQPGDQLSLSAVELKQHFTQPPPRYSEGTL-----

Query:  --------------------------------------VSAFLCHHFSEVTDYSFTADMETELDNVSAGLTEWKGLLRDYWTRFSSYCELANSVHIHQVE
                                              VSAFLCHHFSEVTDYSFTADME ELDNVSAGLTEWKGLLRDYWTRFS+YCE AN+VHIHQVE
Subjt:  --------------------------------------VSAFLCHHFSEVTDYSFTADMETELDNVSAGLTEWKGLLRDYWTRFSSYCELANSVHIHQVE

Query:  KMLEKKFGDFLFSFLPDNCRTCPSCLEGTLIFKVSRFGAGYFIGCDQHPKCKYIAKTLYGEDEEEVTPQNNNSVEEPKLLGLHPVSNEKILLKSGPYGFY
        KMLEKK+ DFLFSFLPDNCRTCPSCLEGTLIFKVSR+GAGYFIGCDQHP+CKYIAKTLYGEDEEEVTPQNN SVEEPKLLGLHPVS+EKILLKSGPYGFY
Subjt:  KMLEKKFGDFLFSFLPDNCRTCPSCLEGTLIFKVSRFGAGYFIGCDQHPKCKYIAKTLYGEDEEEVTPQNNNSVEEPKLLGLHPVSNEKILLKSGPYGFY

Query:  VQLGEDRKGYLPKRASVSQIKHVDSITLEDALELLRYPITLGNHPKDGQPVIIKIAKAGFSVRHRRTIATVPKNLKPNGITLEKALELLSSNDVRRCGRP
        VQLGEDRKGY+PKR SVSQIK V SITLEDALELLRYPITLGNHPKDG  V+IKI KAGF+VRHRRTIA+VPKNLKPN + L KALELLSS DVRRCGRP
Subjt:  VQLGEDRKGYLPKRASVSQIKHVDSITLEDALELLRYPITLGNHPKDGQPVIIKIAKAGFSVRHRRTIATVPKNLKPNGITLEKALELLSSNDVRRCGRP

Query:  KSNPKVEE
        KS PKVEE
Subjt:  KSNPKVEE

XP_022976244.1 uncharacterized protein LOC111476696 isoform X2 [Cucurbita maxima]

4.0e-219

76.97

Show/hide

Query:  RYGQNFVSESARKYFKKVKNAQEAHEAIRPTDVQQLPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLANESIIFRSTCSRVQFRGFQEV
        RYG NFVSESARKYFKKVKNAQEAHEAIRPTDVQ+LPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLA+ESIIFRSTCSRVQFRGFQEV
Subjt:  RYGQNFVSESARKYFKKVKNAQEAHEAIRPTDVQQLPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLANESIIFRSTCSRVQFRGFQEV

Query:  FEGSLYPLPLVSVFLSALIDFEYNLFVSYKKCKDLIICQDPEADAVRQKDHEENGREELFRILNALQPGDQLSLSAVELKQHFTQPPPRYSEGTL-----
        FE                                     DPE DA+R KDHEEN R+ELFRILNAL+ GDQLSL+AVELKQHFTQPPPRYSEGTL     
Subjt:  FEGSLYPLPLVSVFLSALIDFEYNLFVSYKKCKDLIICQDPEADAVRQKDHEENGREELFRILNALQPGDQLSLSAVELKQHFTQPPPRYSEGTL-----

Query:  --------------------------------------VSAFLCHHFSEVTDYSFTADMETELDNVSAGLTEWKGLLRDYWTRFSSYCELANSVHIHQVE
                                              VSAFLCHHFSEVTDYSFTADME ELDNVSAGLTEWKGLLRDYWTRFS+YCE AN+VHIHQVE
Subjt:  --------------------------------------VSAFLCHHFSEVTDYSFTADMETELDNVSAGLTEWKGLLRDYWTRFSSYCELANSVHIHQVE

Query:  KMLEKKFGDFLFSFLPDNCRTCPSCLEGTLIFKVSRFGAGYFIGCDQHPKCKYIAKTLYGEDEEEVTPQNNNSVEEPKLLGLHPVSNEKILLKSGPYGFY
        KMLEKK+ DFLFSFLPDNCRTCPSCLEGTLIFKVSR+GAGYFIGCDQHP+CKYIAKTLYGEDEEEVTPQNN SVEEPKLLGLHPVS+EKILLKSGPYGFY
Subjt:  KMLEKKFGDFLFSFLPDNCRTCPSCLEGTLIFKVSRFGAGYFIGCDQHPKCKYIAKTLYGEDEEEVTPQNNNSVEEPKLLGLHPVSNEKILLKSGPYGFY

Query:  VQLGEDRKGYLPKRASVSQIKHVDSITLEDALELLRYPITLGNHPKDGQPVIIKIAKAGFSVRHRRTIATVPKNLKPNGITLEKALELLSSNDVRRCGRP
        VQLGEDRKGY+PKR SVSQIK V SITLEDALELLRYPITLGNHPKDG  V+IKI KAGF+VRHRRTIA+VPKNLKPN + L KALELLSS DVRRCGRP
Subjt:  VQLGEDRKGYLPKRASVSQIKHVDSITLEDALELLRYPITLGNHPKDGQPVIIKIAKAGFSVRHRRTIATVPKNLKPNGITLEKALELLSSNDVRRCGRP

Query:  KSNPKVEE
        KS PKVEE
Subjt:  KSNPKVEE

XP_023536595.1 uncharacterized protein LOC111797719 [Cucurbita pepo subsp. pepo]

5.2e-219

76.73

Show/hide

Query:  RYGQNFVSESARKYFKKVKNAQEAHEAIRPTDVQQLPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLANESIIFRSTCSRVQFRGFQEV
        RYG+NFVSESARKYFKKVKNAQEAHEAIRPTDVQ+LPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLA+ESIIFRSTCSRVQFRGFQEV
Subjt:  RYGQNFVSESARKYFKKVKNAQEAHEAIRPTDVQQLPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLANESIIFRSTCSRVQFRGFQEV

Query:  FEGSLYPLPLVSVFLSALIDFEYNLFVSYKKCKDLIICQDPEADAVRQKDHEENGREELFRILNALQPGDQLSLSAVELKQHFTQPPPRYSEGTL-----
        FE                                     DPE DA+R KDHEEN R+ELFRILNAL+ GDQLSL+AVELKQHFTQPPPRYSEGTL     
Subjt:  FEGSLYPLPLVSVFLSALIDFEYNLFVSYKKCKDLIICQDPEADAVRQKDHEENGREELFRILNALQPGDQLSLSAVELKQHFTQPPPRYSEGTL-----

Query:  --------------------------------------VSAFLCHHFSEVTDYSFTADMETELDNVSAGLTEWKGLLRDYWTRFSSYCELANSVHIHQVE
                                              VSAFLCHHFSEVTDYSFTADME ELDNVSAGLTEWKGLLRDYWTRFS+YCE AN+VHIHQVE
Subjt:  --------------------------------------VSAFLCHHFSEVTDYSFTADMETELDNVSAGLTEWKGLLRDYWTRFSSYCELANSVHIHQVE

Query:  KMLEKKFGDFLFSFLPDNCRTCPSCLEGTLIFKVSRFGAGYFIGCDQHPKCKYIAKTLYGEDEEEVTPQNNNSVEEPKLLGLHPVSNEKILLKSGPYGFY
        KMLEKK+ DFLFSFLPDNCR+CPSC+EGTLIFKVSR+GAGYFIGCDQHP+CKYIAKTLYGEDEEEVTPQNN SVEEPKLLGLHPVS+EKILLKSGPYGFY
Subjt:  KMLEKKFGDFLFSFLPDNCRTCPSCLEGTLIFKVSRFGAGYFIGCDQHPKCKYIAKTLYGEDEEEVTPQNNNSVEEPKLLGLHPVSNEKILLKSGPYGFY

Query:  VQLGEDRKGYLPKRASVSQIKHVDSITLEDALELLRYPITLGNHPKDGQPVIIKIAKAGFSVRHRRTIATVPKNLKPNGITLEKALELLSSNDVRRCGRP
        VQLGEDRKGY+PKR SVSQIK VDSITLEDALELLRYPITLGNHPKDGQ V+IKI KAGF+VRHRRTIA+VPKNLKPN + L KALELLSS DVRRCGRP
Subjt:  VQLGEDRKGYLPKRASVSQIKHVDSITLEDALELLRYPITLGNHPKDGQPVIIKIAKAGFSVRHRRTIATVPKNLKPNGITLEKALELLSSNDVRRCGRP

Query:  KSNPKVE
        KS PK E
Subjt:  KSNPKVE

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CSY4 Omega-protein

1.8e-236

83.46

Show/hide

Query:  RYGQNFVSESARKYFKKVKNAQEAHEAIRPTDVQQLPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLANESIIFRSTCSRVQFRGFQEV
        RYGQNFVSESARKYFKKVKNAQEAHEAIRPTDVQQLPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLANESIIFRSTCSRVQFRGFQEV
Subjt:  RYGQNFVSESARKYFKKVKNAQEAHEAIRPTDVQQLPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLANESIIFRSTCSRVQFRGFQEV

Query:  FEGSLYPLPLVSVFLSALIDFEYNLFVSYKKCKDLIICQDPEADAVRQKDHEENGREELFRILNALQPGDQLSLSAVELKQHFTQPPPRYSEGTL-----
        FE                                     DPEADAVRQKDHEENGREELFRILNALQPGDQLSLS VELKQHFTQPPPRYSEGTL     
Subjt:  FEGSLYPLPLVSVFLSALIDFEYNLFVSYKKCKDLIICQDPEADAVRQKDHEENGREELFRILNALQPGDQLSLSAVELKQHFTQPPPRYSEGTL-----

Query:  --------------------------------------VSAFLCHHFSEVTDYSFTADMETELDNVSAGLTEWKGLLRDYWTRFSSYCELANSVHIHQVE
                                              VSAFLCHHFSEVTDYSFTADMETELDNVSAGLTEWKGLLRDYWTRFSSYCELANSVHIHQVE
Subjt:  --------------------------------------VSAFLCHHFSEVTDYSFTADMETELDNVSAGLTEWKGLLRDYWTRFSSYCELANSVHIHQVE

Query:  KMLEKKFGDFLFSFLPDNCRTCPSCLEGTLIFKVSRFGAGYFIGCDQHPKCKYIAKTLYGEDEEEVTPQNNNSVEEPKLLGLHPVSNEKILLKSGPYGFY
        KMLEKKFGDFLFSFLPDNCRTCPSCLEGTLIFKVSRFGAGYFIGCDQHPKCKYIAKTLYGED EEVTPQNNNSVEEPKLLGLHPVSNEKILLKSGPYGFY
Subjt:  KMLEKKFGDFLFSFLPDNCRTCPSCLEGTLIFKVSRFGAGYFIGCDQHPKCKYIAKTLYGEDEEEVTPQNNNSVEEPKLLGLHPVSNEKILLKSGPYGFY

Query:  VQLGEDRKGYLPKRASVSQIKHVDSITLEDALELLRYPITLGNHPKDGQPVIIKIAKAGFSVRHRRTIATVPKNLKPNGITLEKALELLSSNDVRRCGRP
        VQLGEDRKGYLPKRASVSQIKHVDSITLEDALELLRYPITLGNHPKDGQPVIIKIAKAGFSVRHRRTIAT+PKNLKPNGITLEKALELLSSNDVRRCGRP
Subjt:  VQLGEDRKGYLPKRASVSQIKHVDSITLEDALELLRYPITLGNHPKDGQPVIIKIAKAGFSVRHRRTIATVPKNLKPNGITLEKALELLSSNDVRRCGRP

Query:  KSNPKVEE
        KS PKVEE
Subjt:  KSNPKVEE

A0A6J1F8P8 Omega-protein

2.8e-218

76.38

Show/hide

Query:  RYGQNFVSESARKYFKKVKNAQEAHEAIRPTDVQQLPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLANESIIFRSTCSRVQFRGFQEV
        RYG+NFVSESARKYFKKVKNAQEAHEAIRPTDVQ+LPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLA+ESIIFRSTCSRVQFRGFQEV
Subjt:  RYGQNFVSESARKYFKKVKNAQEAHEAIRPTDVQQLPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLANESIIFRSTCSRVQFRGFQEV

Query:  FEGSLYPLPLVSVFLSALIDFEYNLFVSYKKCKDLIICQDPEADAVRQKDHEENGREELFRILNALQPGDQLSLSAVELKQHFTQPPPRYSEGTL-----
        FE                                     DPE DA+R KDHEEN R+ELFRILNAL+ GDQLSL+AVELKQHFTQPPPRYSEGTL     
Subjt:  FEGSLYPLPLVSVFLSALIDFEYNLFVSYKKCKDLIICQDPEADAVRQKDHEENGREELFRILNALQPGDQLSLSAVELKQHFTQPPPRYSEGTL-----

Query:  --------------------------------------VSAFLCHHFSEVTDYSFTADMETELDNVSAGLTEWKGLLRDYWTRFSSYCELANSVHIHQVE
                                              VSAFLCHHFSEVTDYSFTADME ELDNVSAGLTEWKGLL+DYWTRFS+YCE AN+VHIHQVE
Subjt:  --------------------------------------VSAFLCHHFSEVTDYSFTADMETELDNVSAGLTEWKGLLRDYWTRFSSYCELANSVHIHQVE

Query:  KMLEKKFGDFLFSFLPDNCRTCPSCLEGTLIFKVSRFGAGYFIGCDQHPKCKYIAKTLYGEDEEEVTPQNNNSVEEPKLLGLHPVSNEKILLKSGPYGFY
        KMLEKK+ DFLFSFLPDNCR+CPSC EGTLIFKVSR+GAGYFIGCDQHP+CKYIAKTLYGEDEEEVTPQNN SVEEPKLLGLHPVS+EKILLKSGPYGFY
Subjt:  KMLEKKFGDFLFSFLPDNCRTCPSCLEGTLIFKVSRFGAGYFIGCDQHPKCKYIAKTLYGEDEEEVTPQNNNSVEEPKLLGLHPVSNEKILLKSGPYGFY

Query:  VQLGEDRKGYLPKRASVSQIKHVDSITLEDALELLRYPITLGNHPKDGQPVIIKIAKAGFSVRHRRTIATVPKNLKPNGITLEKALELLSSNDVRRCGRP
        VQLGEDRKGY+PKR SVSQIK VDSITLEDALELLRYPITLGNHPKDGQ V+IKI KAGF+VRHRRTIA+VPKNLKPN + L KALELLSS DVRRCGRP
Subjt:  VQLGEDRKGYLPKRASVSQIKHVDSITLEDALELLRYPITLGNHPKDGQPVIIKIAKAGFSVRHRRTIATVPKNLKPNGITLEKALELLSSNDVRRCGRP

Query:  KSNPKVEE
        KS  K EE
Subjt:  KSNPKVEE

A0A6J1F9K7 Omega-protein

2.8e-218

76.38

Show/hide

Query:  RYGQNFVSESARKYFKKVKNAQEAHEAIRPTDVQQLPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLANESIIFRSTCSRVQFRGFQEV
        RYG+NFVSESARKYFKKVKNAQEAHEAIRPTDVQ+LPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLA+ESIIFRSTCSRVQFRGFQEV
Subjt:  RYGQNFVSESARKYFKKVKNAQEAHEAIRPTDVQQLPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLANESIIFRSTCSRVQFRGFQEV

Query:  FEGSLYPLPLVSVFLSALIDFEYNLFVSYKKCKDLIICQDPEADAVRQKDHEENGREELFRILNALQPGDQLSLSAVELKQHFTQPPPRYSEGTL-----
        FE                                     DPE DA+R KDHEEN R+ELFRILNAL+ GDQLSL+AVELKQHFTQPPPRYSEGTL     
Subjt:  FEGSLYPLPLVSVFLSALIDFEYNLFVSYKKCKDLIICQDPEADAVRQKDHEENGREELFRILNALQPGDQLSLSAVELKQHFTQPPPRYSEGTL-----

Query:  --------------------------------------VSAFLCHHFSEVTDYSFTADMETELDNVSAGLTEWKGLLRDYWTRFSSYCELANSVHIHQVE
                                              VSAFLCHHFSEVTDYSFTADME ELDNVSAGLTEWKGLL+DYWTRFS+YCE AN+VHIHQVE
Subjt:  --------------------------------------VSAFLCHHFSEVTDYSFTADMETELDNVSAGLTEWKGLLRDYWTRFSSYCELANSVHIHQVE

Query:  KMLEKKFGDFLFSFLPDNCRTCPSCLEGTLIFKVSRFGAGYFIGCDQHPKCKYIAKTLYGEDEEEVTPQNNNSVEEPKLLGLHPVSNEKILLKSGPYGFY
        KMLEKK+ DFLFSFLPDNCR+CPSC EGTLIFKVSR+GAGYFIGCDQHP+CKYIAKTLYGEDEEEVTPQNN SVEEPKLLGLHPVS+EKILLKSGPYGFY
Subjt:  KMLEKKFGDFLFSFLPDNCRTCPSCLEGTLIFKVSRFGAGYFIGCDQHPKCKYIAKTLYGEDEEEVTPQNNNSVEEPKLLGLHPVSNEKILLKSGPYGFY

Query:  VQLGEDRKGYLPKRASVSQIKHVDSITLEDALELLRYPITLGNHPKDGQPVIIKIAKAGFSVRHRRTIATVPKNLKPNGITLEKALELLSSNDVRRCGRP
        VQLGEDRKGY+PKR SVSQIK VDSITLEDALELLRYPITLGNHPKDGQ V+IKI KAGF+VRHRRTIA+VPKNLKPN + L KALELLSS DVRRCGRP
Subjt:  VQLGEDRKGYLPKRASVSQIKHVDSITLEDALELLRYPITLGNHPKDGQPVIIKIAKAGFSVRHRRTIATVPKNLKPNGITLEKALELLSSNDVRRCGRP

Query:  KSNPKVEE
        KS  K EE
Subjt:  KSNPKVEE

A0A6J1IF86 Omega-protein

1.9e-219

76.97

Show/hide

Query:  RYGQNFVSESARKYFKKVKNAQEAHEAIRPTDVQQLPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLANESIIFRSTCSRVQFRGFQEV
        RYG NFVSESARKYFKKVKNAQEAHEAIRPTDVQ+LPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLA+ESIIFRSTCSRVQFRGFQEV
Subjt:  RYGQNFVSESARKYFKKVKNAQEAHEAIRPTDVQQLPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLANESIIFRSTCSRVQFRGFQEV

Query:  FEGSLYPLPLVSVFLSALIDFEYNLFVSYKKCKDLIICQDPEADAVRQKDHEENGREELFRILNALQPGDQLSLSAVELKQHFTQPPPRYSEGTL-----
        FE                                     DPE DA+R KDHEEN R+ELFRILNAL+ GDQLSL+AVELKQHFTQPPPRYSEGTL     
Subjt:  FEGSLYPLPLVSVFLSALIDFEYNLFVSYKKCKDLIICQDPEADAVRQKDHEENGREELFRILNALQPGDQLSLSAVELKQHFTQPPPRYSEGTL-----

Query:  --------------------------------------VSAFLCHHFSEVTDYSFTADMETELDNVSAGLTEWKGLLRDYWTRFSSYCELANSVHIHQVE
                                              VSAFLCHHFSEVTDYSFTADME ELDNVSAGLTEWKGLLRDYWTRFS+YCE AN+VHIHQVE
Subjt:  --------------------------------------VSAFLCHHFSEVTDYSFTADMETELDNVSAGLTEWKGLLRDYWTRFSSYCELANSVHIHQVE

Query:  KMLEKKFGDFLFSFLPDNCRTCPSCLEGTLIFKVSRFGAGYFIGCDQHPKCKYIAKTLYGEDEEEVTPQNNNSVEEPKLLGLHPVSNEKILLKSGPYGFY
        KMLEKK+ DFLFSFLPDNCRTCPSCLEGTLIFKVSR+GAGYFIGCDQHP+CKYIAKTLYGEDEEEVTPQNN SVEEPKLLGLHPVS+EKILLKSGPYGFY
Subjt:  KMLEKKFGDFLFSFLPDNCRTCPSCLEGTLIFKVSRFGAGYFIGCDQHPKCKYIAKTLYGEDEEEVTPQNNNSVEEPKLLGLHPVSNEKILLKSGPYGFY

Query:  VQLGEDRKGYLPKRASVSQIKHVDSITLEDALELLRYPITLGNHPKDGQPVIIKIAKAGFSVRHRRTIATVPKNLKPNGITLEKALELLSSNDVRRCGRP
        VQLGEDRKGY+PKR SVSQIK V SITLEDALELLRYPITLGNHPKDG  V+IKI KAGF+VRHRRTIA+VPKNLKPN + L KALELLSS DVRRCGRP
Subjt:  VQLGEDRKGYLPKRASVSQIKHVDSITLEDALELLRYPITLGNHPKDGQPVIIKIAKAGFSVRHRRTIATVPKNLKPNGITLEKALELLSSNDVRRCGRP

Query:  KSNPKVEE
        KS PKVEE
Subjt:  KSNPKVEE

A0A6J1IMZ7 Omega-protein

1.9e-219

76.97

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Query:  RYGQNFVSESARKYFKKVKNAQEAHEAIRPTDVQQLPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLANESIIFRSTCSRVQFRGFQEV
        RYG NFVSESARKYFKKVKNAQEAHEAIRPTDVQ+LPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLA+ESIIFRSTCSRVQFRGFQEV
Subjt:  RYGQNFVSESARKYFKKVKNAQEAHEAIRPTDVQQLPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLANESIIFRSTCSRVQFRGFQEV

Query:  FEGSLYPLPLVSVFLSALIDFEYNLFVSYKKCKDLIICQDPEADAVRQKDHEENGREELFRILNALQPGDQLSLSAVELKQHFTQPPPRYSEGTL-----
        FE                                     DPE DA+R KDHEEN R+ELFRILNAL+ GDQLSL+AVELKQHFTQPPPRYSEGTL     
Subjt:  FEGSLYPLPLVSVFLSALIDFEYNLFVSYKKCKDLIICQDPEADAVRQKDHEENGREELFRILNALQPGDQLSLSAVELKQHFTQPPPRYSEGTL-----

Query:  --------------------------------------VSAFLCHHFSEVTDYSFTADMETELDNVSAGLTEWKGLLRDYWTRFSSYCELANSVHIHQVE
                                              VSAFLCHHFSEVTDYSFTADME ELDNVSAGLTEWKGLLRDYWTRFS+YCE AN+VHIHQVE
Subjt:  --------------------------------------VSAFLCHHFSEVTDYSFTADMETELDNVSAGLTEWKGLLRDYWTRFSSYCELANSVHIHQVE

Query:  KMLEKKFGDFLFSFLPDNCRTCPSCLEGTLIFKVSRFGAGYFIGCDQHPKCKYIAKTLYGEDEEEVTPQNNNSVEEPKLLGLHPVSNEKILLKSGPYGFY
        KMLEKK+ DFLFSFLPDNCRTCPSCLEGTLIFKVSR+GAGYFIGCDQHP+CKYIAKTLYGEDEEEVTPQNN SVEEPKLLGLHPVS+EKILLKSGPYGFY
Subjt:  KMLEKKFGDFLFSFLPDNCRTCPSCLEGTLIFKVSRFGAGYFIGCDQHPKCKYIAKTLYGEDEEEVTPQNNNSVEEPKLLGLHPVSNEKILLKSGPYGFY

Query:  VQLGEDRKGYLPKRASVSQIKHVDSITLEDALELLRYPITLGNHPKDGQPVIIKIAKAGFSVRHRRTIATVPKNLKPNGITLEKALELLSSNDVRRCGRP
        VQLGEDRKGY+PKR SVSQIK V SITLEDALELLRYPITLGNHPKDG  V+IKI KAGF+VRHRRTIA+VPKNLKPN + L KALELLSS DVRRCGRP
Subjt:  VQLGEDRKGYLPKRASVSQIKHVDSITLEDALELLRYPITLGNHPKDGQPVIIKIAKAGFSVRHRRTIATVPKNLKPNGITLEKALELLSSNDVRRCGRP

Query:  KSNPKVEE
        KS PKVEE
Subjt:  KSNPKVEE

SwissProt top hits

e value

%identity

Alignment

Q1RIM1 DNA topoisomerase 1

5.2e-60

32.68

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Query:  YGQNFVSESARKYFKKVKNAQEAHEAIRPTDVQQLPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLANESIIFRSTCSRVQFRGFQEVF
        YG  ++  S R Y  KVKNAQEAHEAIRPT++  +P+ L   L++D +KLY LIW RT+ACQME  I + +       N+  + R+  S + F GF +V+
Subjt:  YGQNFVSESARKYFKKVKNAQEAHEAIRPTDVQQLPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLANESIIFRSTCSRVQFRGFQEVF

Query:  EGSL-YPLPLVSVFLSALIDFEYNLFVSYKKCKDLIICQD--------PEADAVRQKDHEENGREELF-RILNALQPGDQLSLSAVELKQHFTQPPPRYS
          S+       +  L  L + E      + K K++I  Q          EA  V++ +    GR   +  IL+ LQ    ++L     K+ F        
Subjt:  EGSL-YPLPLVSVFLSALIDFEYNLFVSYKKCKDLIICQD--------PEADAVRQKDHEENGREELF-RILNALQPGDQLSLSAVELKQHFTQPPPRYS

Query:  EGTLVSAFLCHHFSEVTDYSFTADMETELDNVSAGLTEWKGLLRDYWTRFSSYCELANSVHIHQVEKMLEKKFGDFLFSFLPDNCRTCPSCLEGTLIFKV
         G LV+ FL   F +  +Y FTA +E ELD ++AG  EWK  L ++W  F+   E  N  +I ++   +++     +F    D+ + CPSC  G L  K+
Subjt:  EGTLVSAFLCHHFSEVTDYSFTADMETELDNVSAGLTEWKGLLRDYWTRFSSYCELANSVHIHQVEKMLEKKFGDFLFSFLPDNCRTCPSCLEGTLIFKV

Query:  SRFGAGYFIGCDQHPKCKYIAKTLYGEDEEEVTPQNNNSVEEPKLLGLHPVSNEKILLKSGPYGFYVQLGEDRKGYL-PKRASVSQIKHVDSITLEDALE
         +FGA  F+ C  +P+C +    + G D  E   +  + V E K+LG      E I LK GPYG Y+Q GE     + PKR+ +    + + ITL+ AL+
Subjt:  SRFGAGYFIGCDQHPKCKYIAKTLYGEDEEEVTPQNNNSVEEPKLLGLHPVSNEKILLKSGPYGFYVQLGEDRKGYL-PKRASVSQIKHVDSITLEDALE

Query:  LLRYPITLGNHPKDGQPVIIKIAKAGFSVRHRRTIATVPKNLKPNGITLEKALELL
        LL  P+ +GNH + G+ V++   K G  +++     ++PK      ++L+ A++L+
Subjt:  LLRYPITLGNHPKDGQPVIIKIAKAGFSVRHRRTIATVPKNLKPNGITLEKALELL

Q4UM42 DNA topoisomerase 1

4.0e-60

32.9

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Query:  YGQNFVSESARKYFKKVKNAQEAHEAIRPTDVQQLPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLANESIIFRSTCSRVQFRGFQEVF
        YG  ++  S R Y  KVKNAQEAHEAIRPT++   P  L   L++D +KLY LIW RT+ACQME  I + +       N+  + ++  S + F GF +V+
Subjt:  YGQNFVSESARKYFKKVKNAQEAHEAIRPTDVQQLPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLANESIIFRSTCSRVQFRGFQEVF

Query:  EGSLYPLPLVSVFLSALIDFEYNLFVSYK-----KCKDLIICQD--------PEADAVRQKDHEENGREELF-RILNALQPGDQLSLSAVELKQHFTQPP
          S          +    + E  +    K     K K++I  Q          EA  V++ +    GR   +  IL+ LQ    +SL     K+ F    
Subjt:  EGSLYPLPLVSVFLSALIDFEYNLFVSYK-----KCKDLIICQD--------PEADAVRQKDHEENGREELF-RILNALQPGDQLSLSAVELKQHFTQPP

Query:  PRYSEGTLVSAFLCHHFSEVTDYSFTADMETELDNVSAGLTEWKGLLRDYWTRFSSYCELANSVHIHQVEKMLEKKFGDFLFSFLPDNCRTCPSCLEGTL
             G LV+ FL   F +  +Y FTA +E ELD ++AG  EWK  L ++W+ F+   E  N   I ++   ++K     LFS   ++ + CPSC  G L
Subjt:  PRYSEGTLVSAFLCHHFSEVTDYSFTADMETELDNVSAGLTEWKGLLRDYWTRFSSYCELANSVHIHQVEKMLEKKFGDFLFSFLPDNCRTCPSCLEGTL

Query:  IFKVSRFGAGYFIGCDQHPKCKYIAKTLYGEDEEEVTPQNNNSVEEPKLLGLHPVSNEKILLKSGPYGFYVQLGEDRKGYLPKRASVSQIKHVDSITLED
          K+ +FGA  F+ C  +P+C +    + G D  E       +  E K+LG      E I LK GPYG YVQLGE      PKR+ V    + + ITLE 
Subjt:  IFKVSRFGAGYFIGCDQHPKCKYIAKTLYGEDEEEVTPQNNNSVEEPKLLGLHPVSNEKILLKSGPYGFYVQLGEDRKGYLPKRASVSQIKHVDSITLED

Query:  ALELLRYPITLGNHPKDGQPVIIKIAKAGFSVRHRRTIATVPKNLKPNGITLEKALELLSSNDVR
        AL+LL  P+ +G H   G+ ++I   K G  +++     ++PK      ++L+ A++L+  N  +
Subjt:  ALELLRYPITLGNHPKDGQPVIIKIAKAGFSVRHRRTIATVPKNLKPNGITLEKALELLSSNDVR

Q68X45 DNA topoisomerase 1

9.7e-59

32.1

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Query:  YGQNFVSESARKYFKKVKNAQEAHEAIRPTDVQQLPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLANESIIFRSTCSRVQFRGFQEVF
        YG  ++  + R Y  KVKNAQEAHEAIRPT++   P  L   L++D +KLY LIW RT+ACQME  I + +  +    N+  + ++  S + F GF +V+
Subjt:  YGQNFVSESARKYFKKVKNAQEAHEAIRPTDVQQLPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLANESIIFRSTCSRVQFRGFQEVF

Query:  EGSLYPLPLVSVFLSALIDFEYNLFVSYKKCKDLIICQDPEADAVRQKDHEENGREELFRILNAL---QPGDQLS-LSAVELKQHFTQPPPRY---SEGT
          SL              D E N  +   K ++ I  ++   +    +         L + L  L   +P    S LS ++ +++ T    R+     G 
Subjt:  EGSLYPLPLVSVFLSALIDFEYNLFVSYKKCKDLIICQDPEADAVRQKDHEENGREELFRILNAL---QPGDQLS-LSAVELKQHFTQPPPRY---SEGT

Query:  LVSAFLCHHFSEVTDYSFTADMETELDNVSAGLTEWKGLLRDYWTRFSSYCELANSVHIHQVEKMLEKKFGDFLFSFLPDNCRTCPSCLEGTLIFKVSRF
        LV+ FL   F +  +Y FTA +E ELD ++AG  EWK  L ++W+ F++  E  N   I ++   L+K     LF    ++ + CPSC  G L  K+ +F
Subjt:  LVSAFLCHHFSEVTDYSFTADMETELDNVSAGLTEWKGLLRDYWTRFSSYCELANSVHIHQVEKMLEKKFGDFLFSFLPDNCRTCPSCLEGTLIFKVSRF

Query:  GAGYFIGCDQHPKCKYIAKTLYGEDEEEVTPQNNNSVEEPKLLGLHPVSNEKILLKSGPYGFYVQLGEDRKGYLPKRASVSQIKHVDSITLEDALELLRY
        GA  F+ C  +P+C +    + G D  E     +  + + K+LG       +I LK+GPYG Y+QLGE      PKR  V        ITLE AL+LL  
Subjt:  GAGYFIGCDQHPKCKYIAKTLYGEDEEEVTPQNNNSVEEPKLLGLHPVSNEKILLKSGPYGFYVQLGEDRKGYLPKRASVSQIKHVDSITLEDALELLRY

Query:  PITLGNHPKDGQPVIIKIAKAGFSVRHRRTIATVPKNLKPNGITLEKALELLSSNDVR
        P+ +G H   G+ +II  +K G  +++     +VPK      + L+ A++L+ +N  +
Subjt:  PITLGNHPKDGQPVIIKIAKAGFSVRHRRTIATVPKNLKPNGITLEKALELLSSNDVR

Q92IH1 DNA topoisomerase 1

2.6e-59

30.57

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Query:  YGQNFVSESARKYFKKVKNAQEAHEAIRPTDVQQLPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLANESIIFRSTCSRVQFRGFQEVF
        YG  ++  S R Y  KVKNAQEAHEAIRPT++   P  L   LD+D +KLY LIW RT+ACQME  I + +  +    N+  + ++  S + F GF +V+
Subjt:  YGQNFVSESARKYFKKVKNAQEAHEAIRPTDVQQLPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLANESIIFRSTCSRVQFRGFQEVF

Query:  EGSLYPLPLVSVFLSALIDFEYNLFVSYKKCKDLIICQDPEADAVRQKDHEENGREELFRILNALQPGDQLSLSAVELKQHFTQPPPRYSE---------
          S+                                  D EA+       EEN      ++L  L+  + L   AV   QHFT+PPPRYSE         
Subjt:  EGSLYPLPLVSVFLSALIDFEYNLFVSYKKCKDLIICQDPEADAVRQKDHEENGREELFRILNALQPGDQLSLSAVELKQHFTQPPPRYSE---------

Query:  ----------------------------------GTLVSAFLCHHFSEVTDYSFTADMETELDNVSAGLTEWKGLLRDYWTRFSSYCELANSVHIHQVEK
                                          G LV+ FL   F +  +Y FTA +E ELD ++AG  EWK  L ++W+ F+   E  N   I ++  
Subjt:  ----------------------------------GTLVSAFLCHHFSEVTDYSFTADMETELDNVSAGLTEWKGLLRDYWTRFSSYCELANSVHIHQVEK

Query:  MLEKKFGDFLFSFLPDNCRTCPSCLEGTLIFKVSRFGAGYFIGCDQHPKCKYIAKTLYGEDEEEVTPQNNNSVEEPKLLGLHPVSNEKILLKSGPYGFYV
         ++K     LF    ++ + CPSC  G L  K+ +FGA  F+ C  +P+C +    + G D  E   +      E K+LG       +I LK GPYG Y+
Subjt:  MLEKKFGDFLFSFLPDNCRTCPSCLEGTLIFKVSRFGAGYFIGCDQHPKCKYIAKTLYGEDEEEVTPQNNNSVEEPKLLGLHPVSNEKILLKSGPYGFYV

Query:  QLGEDRKGYLPKRASVSQIKHVDSITLEDALELLRYPITLGNHPKDGQPVIIKIAKAGFSVRHRRTIATVPKNLKPNGITLEKALELLSSNDVR
        QLG+      PKR+ V    + + ITL+ AL+LL  P+ +G H    + ++I   K G  +++     +V K      ++L+ A++L+  N  +
Subjt:  QLGEDRKGYLPKRASVSQIKHVDSITLEDALELLRYPITLGNHPKDGQPVIIKIAKAGFSVRHRRTIATVPKNLKPNGITLEKALELLSSNDVR

Q9ZDK2 DNA topoisomerase 1

4.8e-58

32.62

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Query:  YGQNFVSESARKYFKKVKNAQEAHEAIRPTDVQQLPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLANESIIFRSTCSRVQFRGFQEVF
        YG  ++    R Y  KVKNAQEAHEAIRPT++   P  L   L++D +KLY LIW RT+ACQME  I + +  +    N+  + ++  S + F GF +V+
Subjt:  YGQNFVSESARKYFKKVKNAQEAHEAIRPTDVQQLPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLANESIIFRSTCSRVQFRGFQEVF

Query:  EGSLYPLPLVSVFLSALIDFEYNLFV------SYKKCKDLI----ICQDP----EADAVRQKDHEENGREELF-RILNALQPGDQLSLSAVELKQHFTQP
          SL              D E N  +       + K K++I      + P    EA  V++ +    GR   +  IL+ LQ    ++L     K+ F   
Subjt:  EGSLYPLPLVSVFLSALIDFEYNLFV------SYKKCKDLI----ICQDP----EADAVRQKDHEENGREELF-RILNALQPGDQLSLSAVELKQHFTQP

Query:  PPRYSEGTLVSAFLCHHFSEVTDYSFTADMETELDNVSAGLTEWKGLLRDYWTRFSSYCELANSVHIHQVEKMLEKKFGDFLFSFLPDNCRTCPSCLEGT
              G LV+ FL   F +  +Y FTA +E ELD ++AG  EWK  L ++W  F+   E  N   I ++   L+K     LF    ++ + CPSC  G 
Subjt:  PPRYSEGTLVSAFLCHHFSEVTDYSFTADMETELDNVSAGLTEWKGLLRDYWTRFSSYCELANSVHIHQVEKMLEKKFGDFLFSFLPDNCRTCPSCLEGT

Query:  LIFKVSRFGAGYFIGCDQHPKCKYIAKTLYGEDEEEVTPQNNNSVEEPKLLGLHPVSNEKILLKSGPYGFYVQLGEDRKGYLPKRASVSQIKHVDSITLE
        L  K+ +FGA  F+ C  +P+C +    + G D  E     +  + + K+LG       +I LK GPYG Y+QLGE      PKR  V        ITLE
Subjt:  LIFKVSRFGAGYFIGCDQHPKCKYIAKTLYGEDEEEVTPQNNNSVEEPKLLGLHPVSNEKILLKSGPYGFYVQLGEDRKGYLPKRASVSQIKHVDSITLE

Query:  DALELLRYPITLGNHPKDGQPVIIKIAKAGFSVRHRRTIATVPKNLKPNGITLEKALELLSSNDVR
         AL+LL  P+ +G H   G+ +II  +K G  +++     +VPK      ++L  A++L+ +N  +
Subjt:  DALELLRYPITLGNHPKDGQPVIIKIAKAGFSVRHRRTIATVPKNLKPNGITLEKALELLSSNDVR

Arabidopsis top hits

e value

%identity

Alignment

AT4G31210.1 DNA topoisomerase, type IA, core

5.1e-164

56.39

Show/hide

Query:  RYGQNFVSESARKYFKKVKNAQEAHEAIRPTDVQQLPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLANESIIFRSTCSRVQFRGFQEV
        RYG+NF S+S RKYFKKVKNAQEAHEAIRPTD+++LPS +   LD DS KLY+LIW R +ACQMEP+   QIQ+D G A+ESIIFRS+CS+V+F G+Q V
Subjt:  RYGQNFVSESARKYFKKVKNAQEAHEAIRPTDVQQLPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLANESIIFRSTCSRVQFRGFQEV

Query:  FEGSLYPLPLVSVFLSALIDFEYNLFVSYKKCKDLIICQDPEADAVRQKDHEENG-REELFRILNALQPGDQLSLSAVELKQHFTQPPPRYSEGTL----
        +E                                     DPEA A++  D++++  REE F+ L++L+ GD L +  VELKQH TQ PPRYSEG+L    
Subjt:  FEGSLYPLPLVSVFLSALIDFEYNLFVSYKKCKDLIICQDPEADAVRQKDHEENG-REELFRILNALQPGDQLSLSAVELKQHFTQPPPRYSEGTL----

Query:  ---------------------------------------VSAFLCHHFSEVTDYSFTADMETELDNVSAGLTEWKGLLRDYWTRFSSYCELANSVHIHQV
                                               VSAFL H+F+E+TDYSFTADMETELDNVS G+TEWKGLLRDYWTRFS+YC+   +V   QV
Subjt:  ---------------------------------------VSAFLCHHFSEVTDYSFTADMETELDNVSAGLTEWKGLLRDYWTRFSSYCELANSVHIHQV

Query:  EKMLEKKFGDFLFSFLPDNCRTCPSCLEGTLIFKVSRFGAGYFIGCDQHPKCKYIAKTLYGEDEEEVTPQNNNSVEEPKLLGLHPVSNEKILLKSGPYGF
        EKMLEKK+ D LFS LP   RTCPSC+EGTL FK S+FGAGYFIGCDQHP CK+IAKTLYGEDE+E  P  NN VEEPKLLGLHP ++EK++LK GPYG 
Subjt:  EKMLEKKFGDFLFSFLPDNCRTCPSCLEGTLIFKVSRFGAGYFIGCDQHPKCKYIAKTLYGEDEEEVTPQNNNSVEEPKLLGLHPVSNEKILLKSGPYGF

Query:  YVQLGEDRKGYLPKRASVSQIKHVDSITLEDALELLRYPITLGNHPKDGQPVIIKIAKAGFSVRHRRTIATVPKNLKPNGITLEKALELLSSNDVRRCGR
        YVQLGED+KG+ PKRA+ + IK V+SITLE ALELLRYP+TLG HP+DGQPV++K++K+GF+++HRR +ATVPKN +P  +TLE+A++LLS  +VR+ GR
Subjt:  YVQLGEDRKGYLPKRASVSQIKHVDSITLEDALELLRYPITLGNHPKDGQPVIIKIAKAGFSVRHRRTIATVPKNLKPNGITLEKALELLSSNDVRRCGR

Query:  PKSNPKVEE
        P  +   EE
Subjt:  PKSNPKVEE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

GTTTGCAGATATGGGCAGAATTTTGTATCAGAAAGTGCACGCAAATATTTTAAGAAGGTCAAGAATGCTCAAGAGGCTCATGAAGCAATCAGACCCACTGATGTGCAACA
ATTACCATCAATGCTAGTAGGGACACTTGATGAAGATTCACACAAACTATACTCTCTTATTTGGCTCCGAACTATGGCATGCCAAATGGAACCTTCAATCACTGAACAGA
TTCAAATCGACAGTGGACTTGCAAATGAGTCCATCATTTTCCGATCTACATGCTCAAGAGTTCAATTTCGTGGATTCCAAGAAGTTTTTGAGGGTTCCCTCTACCCTCTG
CCTCTTGTCTCTGTCTTTTTGTCGGCTCTCATTGATTTTGAATACAATCTTTTTGTTTCTTATAAAAAATGTAAAGATCTAATAATTTGTCAGGACCCAGAAGCTGATGC
TGTCAGACAAAAAGACCATGAAGAGAATGGGCGTGAGGAACTGTTTAGAATTCTTAATGCATTACAGCCAGGGGATCAATTGTCTCTGTCTGCAGTTGAACTCAAGCAAC
ATTTTACCCAGCCCCCACCTCGCTATTCTGAGGGAACATTGGTGTCGGCATTTCTTTGTCACCATTTTTCTGAGGTCACAGATTATAGTTTTACTGCTGACATGGAAACT
GAGCTTGATAACGTCTCTGCTGGTTTAACTGAATGGAAAGGCCTCCTAAGAGATTATTGGACTCGATTCAGCTCATATTGTGAACTTGCTAACAGTGTTCATATTCATCA
GGTGGAAAAGATGTTGGAGAAGAAATTTGGGGATTTCTTATTTTCTTTTCTTCCTGATAATTGCAGAACATGTCCAAGTTGTCTGGAGGGCACTCTGATTTTCAAAGTTA
GTCGGTTTGGTGCGGGCTATTTCATAGGTTGTGATCAACACCCAAAATGCAAGTACATTGCAAAAACATTATATGGTGAGGATGAAGAAGAAGTTACTCCTCAAAATAAC
AACAGTGTAGAGGAGCCAAAATTGCTCGGTCTTCATCCAGTTTCCAATGAAAAGATTCTTTTGAAGAGTGGTCCATATGGGTTTTACGTACAACTTGGTGAGGACAGGAA
AGGGTACTTGCCCAAAAGAGCCTCTGTATCTCAGATAAAGCACGTGGACTCTATTACTCTTGAGGATGCCCTTGAACTATTACGCTACCCGATTACTTTGGGAAACCATC
CAAAGGATGGTCAACCAGTTATAATAAAGATAGCAAAAGCTGGATTCTCAGTTAGACATCGGCGCACGATAGCTACTGTTCCGAAGAATTTGAAGCCGAATGGTATAACC
TTAGAGAAAGCGTTGGAGCTTCTATCAAGTAATGATGTTAGAAGGTGCGGGCGGCCTAAAAGCAATCCTAAGGTGGAGGAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

VCRYGQNFVSESARKYFKKVKNAQEAHEAIRPTDVQQLPSMLVGTLDEDSHKLYSLIWLRTMACQMEPSITEQIQIDSGLANESIIFRSTCSRVQFRGFQEVFEGSLYPL
PLVSVFLSALIDFEYNLFVSYKKCKDLIICQDPEADAVRQKDHEENGREELFRILNALQPGDQLSLSAVELKQHFTQPPPRYSEGTLVSAFLCHHFSEVTDYSFTADMET
ELDNVSAGLTEWKGLLRDYWTRFSSYCELANSVHIHQVEKMLEKKFGDFLFSFLPDNCRTCPSCLEGTLIFKVSRFGAGYFIGCDQHPKCKYIAKTLYGEDEEEVTPQNN
NSVEEPKLLGLHPVSNEKILLKSGPYGFYVQLGEDRKGYLPKRASVSQIKHVDSITLEDALELLRYPITLGNHPKDGQPVIIKIAKAGFSVRHRRTIATVPKNLKPNGIT
LEKALELLSSNDVRRCGRPKSNPKVEE

MS008423 (gene) of Bitter gourd (TR) v1 genome