; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS008445 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008445
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionflowering-promoting factor 1-like protein 1
Genome locationscaffold4:1470200..1470544
RNA-Seq ExpressionMS008445
SyntenyMS008445
Gene Ontology termsGO:0009909 - regulation of flower development (biological process)
GO:0010228 - vegetative to reproductive phase transition of meristem (biological process)
InterPro domainsIPR039274 - Flowering-promoting factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136318.1 flowering-promoting factor 1-like protein 2 [Cucumis sativus]1.8e-4882.93Show/hide
Query:  MSGVWVFRSNGVMCLVDNAA---EFSSEA------NHGGGGGRNKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDF
        MSGVWVFRSNGVM LV+N+    ++SS+       +HGGGGGR KKVLVHLPSGQPV SYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDF
Subjt:  MSGVWVFRSNGVMCLVDNAA---EFSSEA------NHGGGGGRNKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDF

Query:  SKFNSIYMYDLVIKNPNVFHVRE
        SKFNSIYM+DLVIKNPNVFHVRE
Subjt:  SKFNSIYMYDLVIKNPNVFHVRE

XP_008466327.1 PREDICTED: flowering-promoting factor 1-like protein 2 [Cucumis melo]8.2e-4978.91Show/hide
Query:  MSGVWVFRSNGVMCLVDNAA---EFSSEANH-----------GGGGGRNKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLIS
        MSGVWVFRSNGVM LV+N+    ++SS+ +H           GGGGG  KKVLVHLPSGQPV SYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLIS
Subjt:  MSGVWVFRSNGVMCLVDNAA---EFSSEANH-----------GGGGGRNKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLIS

Query:  LPMDFSKFNSIYMYDLVIKNPNVFHVRE
        LPMDFSKFNSIYMYDLV+KNPNVFHVRE
Subjt:  LPMDFSKFNSIYMYDLVIKNPNVFHVRE

XP_022139436.1 flowering-promoting factor 1-like protein 1 [Momordica charantia]3.0e-5999.14Show/hide
Query:  MSGVWVFRSNGVMCLVDNAAEFSSEANH-GGGGGRNKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYM
        MSGVWVFRSNGVMCLVDNAAEFSSEANH GGGGGRNKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYM
Subjt:  MSGVWVFRSNGVMCLVDNAAEFSSEANH-GGGGGRNKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYM

Query:  YDLVIKNPNVFHVRES
        YDLVIKNPNVFHVRES
Subjt:  YDLVIKNPNVFHVRES

XP_022937028.1 flowering-promoting factor 1-like protein 2 [Cucurbita moschata]5.3e-4882.64Show/hide
Query:  MSGVWVFRSNGVMCLVDNA---AEFSSEA----NHGGGGGRNKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSK
        MSGVWVFRSNGVM LV+NA    ++SS+     +H  GGGR KK+LVHLPSGQPV+SYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSK
Subjt:  MSGVWVFRSNGVMCLVDNA---AEFSSEA----NHGGGGGRNKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSK

Query:  FNSIYMYDLVIKNPNVFHVRE
        FNSIYMYDLV+KNPNVFHVRE
Subjt:  FNSIYMYDLVIKNPNVFHVRE

XP_022976219.1 flowering-promoting factor 1-like protein 2 [Cucurbita maxima]3.1e-4884.03Show/hide
Query:  MSGVWVFRSNGVMCLVDNA---AEFSSEA--NHGGGGGRNKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFN
        MSGVWVFRSNGVM LV+NA    ++SS+   +H  GGGR KK+LVHLPSGQPV+SYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFN
Subjt:  MSGVWVFRSNGVMCLVDNA---AEFSSEA--NHGGGGGRNKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFN

Query:  SIYMYDLVIKNPNVFHVRE
        SIYMYDLV+KNPNVFHVRE
Subjt:  SIYMYDLVIKNPNVFHVRE

TrEMBL top hitse value%identityAlignment
A0A0A0LHE6 Uncharacterized protein8.9e-4982.93Show/hide
Query:  MSGVWVFRSNGVMCLVDNAA---EFSSEA------NHGGGGGRNKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDF
        MSGVWVFRSNGVM LV+N+    ++SS+       +HGGGGGR KKVLVHLPSGQPV SYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDF
Subjt:  MSGVWVFRSNGVMCLVDNAA---EFSSEA------NHGGGGGRNKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDF

Query:  SKFNSIYMYDLVIKNPNVFHVRE
        SKFNSIYM+DLVIKNPNVFHVRE
Subjt:  SKFNSIYMYDLVIKNPNVFHVRE

A0A1S3CSB1 flowering-promoting factor 1-like protein 24.0e-4978.91Show/hide
Query:  MSGVWVFRSNGVMCLVDNAA---EFSSEANH-----------GGGGGRNKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLIS
        MSGVWVFRSNGVM LV+N+    ++SS+ +H           GGGGG  KKVLVHLPSGQPV SYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLIS
Subjt:  MSGVWVFRSNGVMCLVDNAA---EFSSEANH-----------GGGGGRNKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLIS

Query:  LPMDFSKFNSIYMYDLVIKNPNVFHVRE
        LPMDFSKFNSIYMYDLV+KNPNVFHVRE
Subjt:  LPMDFSKFNSIYMYDLVIKNPNVFHVRE

A0A5A7UF14 Flowering-promoting factor 1-like protein 24.0e-4978.91Show/hide
Query:  MSGVWVFRSNGVMCLVDNAA---EFSSEANH-----------GGGGGRNKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLIS
        MSGVWVFRSNGVM LV+N+    ++SS+ +H           GGGGG  KKVLVHLPSGQPV SYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLIS
Subjt:  MSGVWVFRSNGVMCLVDNAA---EFSSEANH-----------GGGGGRNKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLIS

Query:  LPMDFSKFNSIYMYDLVIKNPNVFHVRE
        LPMDFSKFNSIYMYDLV+KNPNVFHVRE
Subjt:  LPMDFSKFNSIYMYDLVIKNPNVFHVRE

A0A6J1CCN4 flowering-promoting factor 1-like protein 11.5e-5999.14Show/hide
Query:  MSGVWVFRSNGVMCLVDNAAEFSSEANH-GGGGGRNKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYM
        MSGVWVFRSNGVMCLVDNAAEFSSEANH GGGGGRNKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYM
Subjt:  MSGVWVFRSNGVMCLVDNAAEFSSEANH-GGGGGRNKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYM

Query:  YDLVIKNPNVFHVRES
        YDLVIKNPNVFHVRES
Subjt:  YDLVIKNPNVFHVRES

A0A6J1IMX4 flowering-promoting factor 1-like protein 21.5e-4884.03Show/hide
Query:  MSGVWVFRSNGVMCLVDNA---AEFSSEA--NHGGGGGRNKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFN
        MSGVWVFRSNGVM LV+NA    ++SS+   +H  GGGR KK+LVHLPSGQPV+SYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFN
Subjt:  MSGVWVFRSNGVMCLVDNA---AEFSSEA--NHGGGGGRNKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFN

Query:  SIYMYDLVIKNPNVFHVRE
        SIYMYDLV+KNPNVFHVRE
Subjt:  SIYMYDLVIKNPNVFHVRE

SwissProt top hitse value%identityAlignment
O23624 Flowering-promoting factor 11.7e-3360.34Show/hide
Query:  MSGVWVFRSNGVMCLVDNAAEFSSEANHGGGGGRNKKVLVHLPSGQPVSSYGFLQKILEGLGWERYY-EGDPDFFQFHKRSSIDLISLPMDFSKFNSIYM
        MSGVWVF+ NGV+ LV+N  +  S+  +       +KV+V+LP+G+ VSSY  L++IL+ LGWERY+  GD D  QFHKRSSIDLISLP DF+KFNS+YM
Subjt:  MSGVWVFRSNGVMCLVDNAAEFSSEANHGGGGGRNKKVLVHLPSGQPVSSYGFLQKILEGLGWERYY-EGDPDFFQFHKRSSIDLISLPMDFSKFNSIYM

Query:  YDLVIKNPNVFHVRES
        YD+V+KNPN FHVR+S
Subjt:  YDLVIKNPNVFHVRES

O24340 Flowering-promoting factor 13.3e-3259.48Show/hide
Query:  MSGVWVFRSNGVMCLVDNAAEFSSEANHGGGGGRNKKVLVHLPSGQPVSSYGFLQKILEGLGWERYY-EGDPDFFQFHKRSSIDLISLPMDFSKFNSIYM
        MSGVWVF+ NGV+ LV+N  +       GG     +KV+V+LP+G+ +SSY  L++IL  LGWERY+  GD D  QFHKRSSIDLISLP DF+KF+S+YM
Subjt:  MSGVWVFRSNGVMCLVDNAAEFSSEANHGGGGGRNKKVLVHLPSGQPVSSYGFLQKILEGLGWERYY-EGDPDFFQFHKRSSIDLISLPMDFSKFNSIYM

Query:  YDLVIKNPNVFHVRES
        YD+V+KNPN FHVR+S
Subjt:  YDLVIKNPNVFHVRES

Q0E1D7 Flowering-promoting factor 1-like protein 31.1e-2753.91Show/hide
Query:  MSGVWVFRSNGVMCLVDNAAEFSSEANHGGGGGRNKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMY
        M+GVWVF+   V  + +  +E SS A  GGGGGR +KVLVH+PSG+ V+SY  L++ L  LGWERY   DP   QFH+RS++ LIS+P DFSKF  ++MY
Subjt:  MSGVWVFRSNGVMCLVDNAAEFSSEANHGGGGGRNKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMY

Query:  DLVIKNPNVFHVRES
        D+V+K  NVF VR++
Subjt:  DLVIKNPNVFHVRES

Q5Q0B3 Flowering-promoting factor 1-like protein 11.7e-3664.23Show/hide
Query:  MSGVWVFRSNGVMCLVDN----AAEFSSEANHGGGGGR---NKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGD--PDFFQFHKRSSIDLISLPMDF
        MSGVWVF  NGVM LV+N    +A  SSE++  GG  +    +K+LVHLPS + VSSYG L+KIL+ LGWERYY GD      QFHKR+SIDLISLP DF
Subjt:  MSGVWVFRSNGVMCLVDN----AAEFSSEANHGGGGGR---NKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGD--PDFFQFHKRSSIDLISLPMDF

Query:  SKFNSIYMYDLVIKNPNVFHVRE
        SKFNSI+MYD+V+KNPNVFHVR+
Subjt:  SKFNSIYMYDLVIKNPNVFHVRE

Q9LXB5 Flowering-promoting factor 1-like protein 22.3e-3360.53Show/hide
Query:  MSGVWVFRSNGVMCLVDNAAEFSSEANHGGGGGRNKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMY
        MSGVWVF +NGV+ LV+N  +    +    G    + VLV+LP+G+ VSSY  L++IL  LGWERY+ GD D  Q+HKRSSIDLISLP DFSKFNS+YMY
Subjt:  MSGVWVFRSNGVMCLVDNAAEFSSEANHGGGGGRNKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMY

Query:  DLVIKNPNVFHVRE
        D+V+KNPN FHVR+
Subjt:  DLVIKNPNVFHVRE

Arabidopsis top hitse value%identityAlignment
AT4G31380.1 FPF1-like protein 11.2e-3764.23Show/hide
Query:  MSGVWVFRSNGVMCLVDN----AAEFSSEANHGGGGGR---NKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGD--PDFFQFHKRSSIDLISLPMDF
        MSGVWVF  NGVM LV+N    +A  SSE++  GG  +    +K+LVHLPS + VSSYG L+KIL+ LGWERYY GD      QFHKR+SIDLISLP DF
Subjt:  MSGVWVFRSNGVMCLVDN----AAEFSSEANHGGGGGR---NKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGD--PDFFQFHKRSSIDLISLPMDF

Query:  SKFNSIYMYDLVIKNPNVFHVRE
        SKFNSI+MYD+V+KNPNVFHVR+
Subjt:  SKFNSIYMYDLVIKNPNVFHVRE

AT5G10625.1 BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1)1.6e-3460.53Show/hide
Query:  MSGVWVFRSNGVMCLVDNAAEFSSEANHGGGGGRNKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMY
        MSGVWVF +NGV+ LV+N  +    +    G    + VLV+LP+G+ VSSY  L++IL  LGWERY+ GD D  Q+HKRSSIDLISLP DFSKFNS+YMY
Subjt:  MSGVWVFRSNGVMCLVDNAAEFSSEANHGGGGGRNKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMY

Query:  DLVIKNPNVFHVRE
        D+V+KNPN FHVR+
Subjt:  DLVIKNPNVFHVRE

AT5G24860.1 flowering promoting factor 11.2e-3460.34Show/hide
Query:  MSGVWVFRSNGVMCLVDNAAEFSSEANHGGGGGRNKKVLVHLPSGQPVSSYGFLQKILEGLGWERYY-EGDPDFFQFHKRSSIDLISLPMDFSKFNSIYM
        MSGVWVF+ NGV+ LV+N  +  S+  +       +KV+V+LP+G+ VSSY  L++IL+ LGWERY+  GD D  QFHKRSSIDLISLP DF+KFNS+YM
Subjt:  MSGVWVFRSNGVMCLVDNAAEFSSEANHGGGGGRNKKVLVHLPSGQPVSSYGFLQKILEGLGWERYY-EGDPDFFQFHKRSSIDLISLPMDFSKFNSIYM

Query:  YDLVIKNPNVFHVRES
        YD+V+KNPN FHVR+S
Subjt:  YDLVIKNPNVFHVRES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGGCGTTTGGGTTTTCCGATCGAACGGAGTGATGTGCCTCGTCGACAACGCCGCCGAGTTCTCCTCCGAAGCCAACCACGGCGGCGGCGGCGGCCGGAATAAGAA
GGTCCTCGTTCACCTTCCCTCCGGCCAGCCGGTTTCCTCCTATGGCTTCCTCCAGAAGATTCTCGAAGGCTTGGGCTGGGAGCGATACTACGAAGGCGATCCCGATTTCT
TCCAATTCCACAAGCGATCCTCCATTGATCTCATTTCTCTTCCTATGGACTTCTCCAAATTCAACTCCATTTACATGTACGATCTCGTCATCAAAAACCCTAACGTCTTC
CACGTTCGAGAATCC
mRNA sequenceShow/hide mRNA sequence
ATGTCAGGCGTTTGGGTTTTCCGATCGAACGGAGTGATGTGCCTCGTCGACAACGCCGCCGAGTTCTCCTCCGAAGCCAACCACGGCGGCGGCGGCGGCCGGAATAAGAA
GGTCCTCGTTCACCTTCCCTCCGGCCAGCCGGTTTCCTCCTATGGCTTCCTCCAGAAGATTCTCGAAGGCTTGGGCTGGGAGCGATACTACGAAGGCGATCCCGATTTCT
TCCAATTCCACAAGCGATCCTCCATTGATCTCATTTCTCTTCCTATGGACTTCTCCAAATTCAACTCCATTTACATGTACGATCTCGTCATCAAAAACCCTAACGTCTTC
CACGTTCGAGAATCC
Protein sequenceShow/hide protein sequence
MSGVWVFRSNGVMCLVDNAAEFSSEANHGGGGGRNKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMYDLVIKNPNVF
HVRES