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MS008447 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008447
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein FAM32A-like
Genome locationscaffold4:1483087..1483353
RNA-Seq ExpressionMS008447
SyntenyMS008447
Gene Ontology termsGO:0016126 - sterol biosynthetic process (biological process)
GO:0016132 - brassinosteroid biosynthetic process (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0030176 - integral component of endoplasmic reticulum membrane (cellular component)
GO:0009918 - sterol delta7 reductase activity (molecular function)
GO:0047598 - 7-dehydrocholesterol reductase activity (molecular function)
InterPro domainsIPR013865 - Protein FAM32A


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008466328.1 PREDICTED: protein FAM32A-like [Cucumis melo]3.4e-2673.03Show/hide
Query:  LLGRNHTPLVDCSKESMNNTDTNGSKGQYAAYDDSLTPAERRYLQQWEKIDLRRMAEMASKSHRDRIHEFNQYLGNLSEHHDIPKVGPG
        L GRN T LVDCSKE + +T   G KG    Y+D LT AERRYLQQWEKIDL+RM++MASKSHRDRI EFNQ L NLSEHHDIPKVGPG
Subjt:  LLGRNHTPLVDCSKESMNNTDTNGSKGQYAAYDDSLTPAERRYLQQWEKIDLRRMAEMASKSHRDRIHEFNQYLGNLSEHHDIPKVGPG
XP_011652514.1 protein FAM32A-like [Cucumis sativus]4.2e-2470.79Show/hide
Query:  LLGRNHTPLVDCSKESMNNTDTNGSKGQYAAYDDSLTPAERRYLQQWEKIDLRRMAEMASKSHRDRIHEFNQYLGNLSEHHDIPKVGPG
        L GRN T LVDCSKE      T+G       YDD LT AERRYL+QWEKI+L+RMA+MASKSHRDRI EFNQ L NLSEHHDIPKVGPG
Subjt:  LLGRNHTPLVDCSKESMNNTDTNGSKGQYAAYDDSLTPAERRYLQQWEKIDLRRMAEMASKSHRDRIHEFNQYLGNLSEHHDIPKVGPG
XP_012076315.1 protein FAM32A [Jatropha curcas]5.4e-2473.42Show/hide
Query:  DCSKESMNNTDTNGSKGQYAAYDDSLTPAERRYLQQWEKIDLRRMAEMASKSHRDRIHEFNQYLGNLSEHHDIPKVGPG
        + S E +N TD +  K Q A YDD LTPAERRYLQQWEKIDL+R+ +MASKSHRDRI EFNQYL NLSEH+DIPKVGPG
Subjt:  DCSKESMNNTDTNGSKGQYAAYDDSLTPAERRYLQQWEKIDLRRMAEMASKSHRDRIHEFNQYLGNLSEHHDIPKVGPG
XP_022152816.1 protein FAM32A-like [Momordica charantia]5.4e-4095.4Show/hide
Query:  GRNHTPLVDCSKESMNNTDTNGSKGQYAAYDDSLTPAERRYLQQWEKIDLRRMAEMASKSHRDRIHEFNQYLGNLSEHHDIPKVGPG
        GRN T LVDCSKESMNNTDTNGSKGQYA YDDSLTPAERRYLQQWEKIDLRRMAEMASKSHR RIHEFNQYLGNLSEHHDIPKVGPG
Subjt:  GRNHTPLVDCSKESMNNTDTNGSKGQYAAYDDSLTPAERRYLQQWEKIDLRRMAEMASKSHRDRIHEFNQYLGNLSEHHDIPKVGPG
XP_038897245.1 protein FAM32A-like [Benincasa hispida]9.3e-2482.61Show/hide
Query:  DTNGSKGQYAAYDDSLTPAERRYLQQWEKIDLRRMAEMASKSHRDRIHEFNQYLGNLSEHHDIPKVGPG
        D +  KG YAA D+ LTPAERRYLQQWEKIDL+RMA+MASKSHRDRI EFNQYL NLSEHHDIPKVGPG
Subjt:  DTNGSKGQYAAYDDSLTPAERRYLQQWEKIDLRRMAEMASKSHRDRIHEFNQYLGNLSEHHDIPKVGPG
TrEMBL top hitse value%identityAlignment
A0A0A0LDT5 Uncharacterized protein2.0e-2470.79Show/hide
Query:  LLGRNHTPLVDCSKESMNNTDTNGSKGQYAAYDDSLTPAERRYLQQWEKIDLRRMAEMASKSHRDRIHEFNQYLGNLSEHHDIPKVGPG
        L GRN T LVDCSKE      T+G       YDD LT AERRYL+QWEKI+L+RMA+MASKSHRDRI EFNQ L NLSEHHDIPKVGPG
Subjt:  LLGRNHTPLVDCSKESMNNTDTNGSKGQYAAYDDSLTPAERRYLQQWEKIDLRRMAEMASKSHRDRIHEFNQYLGNLSEHHDIPKVGPG
A0A1S3CQZ2 protein FAM32A-like1.6e-2673.03Show/hide
Query:  LLGRNHTPLVDCSKESMNNTDTNGSKGQYAAYDDSLTPAERRYLQQWEKIDLRRMAEMASKSHRDRIHEFNQYLGNLSEHHDIPKVGPG
        L GRN T LVDCSKE + +T   G KG    Y+D LT AERRYLQQWEKIDL+RM++MASKSHRDRI EFNQ L NLSEHHDIPKVGPG
Subjt:  LLGRNHTPLVDCSKESMNNTDTNGSKGQYAAYDDSLTPAERRYLQQWEKIDLRRMAEMASKSHRDRIHEFNQYLGNLSEHHDIPKVGPG
A0A5A7TBK8 Protein FAM32A-like1.6e-2673.03Show/hide
Query:  LLGRNHTPLVDCSKESMNNTDTNGSKGQYAAYDDSLTPAERRYLQQWEKIDLRRMAEMASKSHRDRIHEFNQYLGNLSEHHDIPKVGPG
        L GRN T LVDCSKE + +T   G KG    Y+D LT AERRYLQQWEKIDL+RM++MASKSHRDRI EFNQ L NLSEHHDIPKVGPG
Subjt:  LLGRNHTPLVDCSKESMNNTDTNGSKGQYAAYDDSLTPAERRYLQQWEKIDLRRMAEMASKSHRDRIHEFNQYLGNLSEHHDIPKVGPG
A0A6J1DIW7 protein FAM32A-like2.6e-4095.4Show/hide
Query:  GRNHTPLVDCSKESMNNTDTNGSKGQYAAYDDSLTPAERRYLQQWEKIDLRRMAEMASKSHRDRIHEFNQYLGNLSEHHDIPKVGPG
        GRN T LVDCSKESMNNTDTNGSKGQYA YDDSLTPAERRYLQQWEKIDLRRMAEMASKSHR RIHEFNQYLGNLSEHHDIPKVGPG
Subjt:  GRNHTPLVDCSKESMNNTDTNGSKGQYAAYDDSLTPAERRYLQQWEKIDLRRMAEMASKSHRDRIHEFNQYLGNLSEHHDIPKVGPG
B9H7C0 Uncharacterized protein1.0e-2369.05Show/hide
Query:  HTPLVDCSKESMNNTDTNGSKGQYAAYDDSLTPAERRYLQQWEKIDLRRMAEMASKSHRDRIHEFNQYLGNLSEHHDIPKVGPG
        +T L       MN TD    +GQ A YDD LTPAE+RYLQQWEKID +RM +MASKSHRDRI EFNQYL NLSEH+DIPKVGPG
Subjt:  HTPLVDCSKESMNNTDTNGSKGQYAAYDDSLTPAERRYLQQWEKIDLRRMAEMASKSHRDRIHEFNQYLGNLSEHHDIPKVGPG
SwissProt top hitse value%identityAlignment
A6QR31 Protein FAM32A1.4e-0643.4Show/hide
Query:  DSLTPAERRYLQQWEKIDLRRMAEMASKSHRDRIHEFNQYLGNLSEHHDIPKV
        D  TPA+  + +  EK  + R+ + ASK+H+ R+ +FN++L  L+EH+DIPKV
Subjt:  DSLTPAERRYLQQWEKIDLRRMAEMASKSHRDRIHEFNQYLGNLSEHHDIPKV
Q5R9E5 Protein FAM32A1.4e-0643.4Show/hide
Query:  DSLTPAERRYLQQWEKIDLRRMAEMASKSHRDRIHEFNQYLGNLSEHHDIPKV
        D  TPA+  + +  EK  + R+ + ASK+H+ R+ +FN++L  L+EH+DIPKV
Subjt:  DSLTPAERRYLQQWEKIDLRRMAEMASKSHRDRIHEFNQYLGNLSEHHDIPKV
Q6GQN4 Protein FAM32A-like3.7e-0740Show/hide
Query:  TNGSKGQYAAYDDSLTPAERRYLQQWEKIDLRRMAEMASKSHRDRIHEFNQYLGNLSEHHDIPKV
        +   +G   AY D  TPA+  + +  EK  + R+ + ASK+H+ R+ +FN++L  L+EH+DIPKV
Subjt:  TNGSKGQYAAYDDSLTPAERRYLQQWEKIDLRRMAEMASKSHRDRIHEFNQYLGNLSEHHDIPKV
Q9CR80 Protein FAM32A1.4e-0643.4Show/hide
Query:  DSLTPAERRYLQQWEKIDLRRMAEMASKSHRDRIHEFNQYLGNLSEHHDIPKV
        D  TPA+  + +  EK  + R+ + ASK+H+ R+ +FN++L  L+EH+DIPKV
Subjt:  DSLTPAERRYLQQWEKIDLRRMAEMASKSHRDRIHEFNQYLGNLSEHHDIPKV
Q9Y421 Protein FAM32A1.4e-0643.4Show/hide
Query:  DSLTPAERRYLQQWEKIDLRRMAEMASKSHRDRIHEFNQYLGNLSEHHDIPKV
        D  TPA+  + +  EK  + R+ + ASK+H+ R+ +FN++L  L+EH+DIPKV
Subjt:  DSLTPAERRYLQQWEKIDLRRMAEMASKSHRDRIHEFNQYLGNLSEHHDIPKV
Arabidopsis top hitse value%identityAlignment
AT1G16810.1 unknown protein6.2e-1864.91Show/hide
Query:  DDSLTPAERRYLQQWEKIDLRRMAEMASKSHRDRIHEFNQYLGNLSEHHDIPKVGPG
        DD LTPAERRY++Q +++D++++A+ A+KSHR+RI +FNQYL N+SEH+DIPKVGPG
Subjt:  DDSLTPAERRYLQQWEKIDLRRMAEMASKSHRDRIHEFNQYLGNLSEHHDIPKVGPG
AT1G16810.2 unknown protein6.2e-1864.91Show/hide
Query:  DDSLTPAERRYLQQWEKIDLRRMAEMASKSHRDRIHEFNQYLGNLSEHHDIPKVGPG
        DD LTPAERRY++Q +++D++++A+ A+KSHR+RI +FNQYL N+SEH+DIPKVGPG
Subjt:  DDSLTPAERRYLQQWEKIDLRRMAEMASKSHRDRIHEFNQYLGNLSEHHDIPKVGPG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGTTAGGAAGGAACCACACTCCATTGGTTGATTGTTCTAAAGAGAGCATGAACAATACCGATACCAATGGAAGCAAAGGGCAGTATGCTGCATACGACGATTCGTTGAC
ACCTGCCGAGAGGCGATATCTTCAGCAATGGGAGAAGATTGATCTTCGAAGAATGGCCGAGATGGCCAGCAAATCTCACCGGGATCGGATTCACGAGTTCAATCAATATC
TGGGCAATCTGAGTGAGCACCATGATATTCCTAAAGTTGGACCTGGC
mRNA sequenceShow/hide mRNA sequence
TTGTTAGGAAGGAACCACACTCCATTGGTTGATTGTTCTAAAGAGAGCATGAACAATACCGATACCAATGGAAGCAAAGGGCAGTATGCTGCATACGACGATTCGTTGAC
ACCTGCCGAGAGGCGATATCTTCAGCAATGGGAGAAGATTGATCTTCGAAGAATGGCCGAGATGGCCAGCAAATCTCACCGGGATCGGATTCACGAGTTCAATCAATATC
TGGGCAATCTGAGTGAGCACCATGATATTCCTAAAGTTGGACCTGGC
Protein sequenceShow/hide protein sequence
LLGRNHTPLVDCSKESMNNTDTNGSKGQYAAYDDSLTPAERRYLQQWEKIDLRRMAEMASKSHRDRIHEFNQYLGNLSEHHDIPKVGPG