CuGenDBv2

Gene ID	MS008460
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Photosystem I P700 chlorophyll a apoprotein A2
Genome location	scaffold4:1559792..1560055
RNA-Seq Expression	MS008460
Synteny	MS008460
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0022900 - electron transport chain (biological process) GO:0009522 - photosystem I (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0000287 - magnesium ion binding (molecular function) GO:0009055 - electron transfer activity (molecular function) GO:0016168 - chlorophyll binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domains	IPR001280 - Photosystem I PsaA/PsaB IPR036408 - Photosystem I PsaA/PsaB superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

AFU95084.1 PsaB, partial [Ixonanthes sp. CCD-2012]

2.7e-44

96.59

Show/hide

Query:  LTIGPGDFLVHHAIALGLHTTTLILVKGVLDARGSKLMSDKKDFGYSFPCDGPGRVGTCDISAWDAFYLSVFWMLNTIGWVTFYWHWK
        LTIGPGDFLVHHAIALGLHTTTLILVKG LDARGSKLMSDKKDFGYSFPCDGPGR GTCDISAWDAFYL+VFWMLNTIGWVTFYWHWK
Subjt:  LTIGPGDFLVHHAIALGLHTTTLILVKGVLDARGSKLMSDKKDFGYSFPCDGPGRVGTCDISAWDAFYLSVFWMLNTIGWVTFYWHWK

CAB4097237.1 unnamed protein product [Lactuca saligna]

3.6e-44

96.59

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Query:  LTIGPGDFLVHHAIALGLHTTTLILVKGVLDARGSKLMSDKKDFGYSFPCDGPGRVGTCDISAWDAFYLSVFWMLNTIGWVTFYWHWK
        LTIGPGDFLVHHAIALGLHTTTLILVKGVLDARGSKLM DKKDFGYSFPCDGPGR GTCDISAWDAFYL+VFWMLNTIGWVTFYWHWK
Subjt:  LTIGPGDFLVHHAIALGLHTTTLILVKGVLDARGSKLMSDKKDFGYSFPCDGPGRVGTCDISAWDAFYLSVFWMLNTIGWVTFYWHWK

QCI04353.1 photosystem I P700 apoprotein A2 [Antithamnion hubbsii]

4.7e-44

96.59

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Query:  LTIGPGDFLVHHAIALGLHTTTLILVKGVLDARGSKLMSDKKDFGYSFPCDGPGRVGTCDISAWDAFYLSVFWMLNTIGWVTFYWHWK
        LTIGPGDFLVHHAIALGLHTTTLILVKG LDARGSKLM DKKDFGYSFPCDGPGR GTCDISAWDAFYLSVFWMLNTIGWVTFYWHWK
Subjt:  LTIGPGDFLVHHAIALGLHTTTLILVKGVLDARGSKLMSDKKDFGYSFPCDGPGRVGTCDISAWDAFYLSVFWMLNTIGWVTFYWHWK

QCI04717.1 photosystem I P700 apoprotein A2 [Bornetia secundiflora]

4.7e-44

96.59

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Query:  LTIGPGDFLVHHAIALGLHTTTLILVKGVLDARGSKLMSDKKDFGYSFPCDGPGRVGTCDISAWDAFYLSVFWMLNTIGWVTFYWHWK
        LTIGPGDFLVHHAIALGLHTTTLILVKG LDARGSKLM DKKDFGYSFPCDGPGR GTCDISAWDAFYLSVFWMLNTIGWVTFYWHWK
Subjt:  LTIGPGDFLVHHAIALGLHTTTLILVKGVLDARGSKLMSDKKDFGYSFPCDGPGRVGTCDISAWDAFYLSVFWMLNTIGWVTFYWHWK

QFK69451.1 photosystem I P700 apoprotein A2 [Ixonanthes chinensis]

2.7e-44

96.59

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Query:  LTIGPGDFLVHHAIALGLHTTTLILVKGVLDARGSKLMSDKKDFGYSFPCDGPGRVGTCDISAWDAFYLSVFWMLNTIGWVTFYWHWK
        LTIGPGDFLVHHAIALGLHTTTLILVKG LDARGSKLMSDKKDFGYSFPCDGPGR GTCDISAWDAFYL+VFWMLNTIGWVTFYWHWK
Subjt:  LTIGPGDFLVHHAIALGLHTTTLILVKGVLDARGSKLMSDKKDFGYSFPCDGPGRVGTCDISAWDAFYLSVFWMLNTIGWVTFYWHWK

TrEMBL top hits

e value

%identity

Alignment

A0A0K1Z9M0 Photosystem I P700 chlorophyll a apoprotein A2

2.3e-44

96.59

Show/hide

Query:  LTIGPGDFLVHHAIALGLHTTTLILVKGVLDARGSKLMSDKKDFGYSFPCDGPGRVGTCDISAWDAFYLSVFWMLNTIGWVTFYWHWK
        LTIGPGDFLVHHAIALGLHTTTLILVKG LDARGSKLM DKKDFGYSFPCDGPGR GTCDISAWDAFYLSVFWMLNTIGWVTFYWHWK
Subjt:  LTIGPGDFLVHHAIALGLHTTTLILVKGVLDARGSKLMSDKKDFGYSFPCDGPGRVGTCDISAWDAFYLSVFWMLNTIGWVTFYWHWK

A0A5J6XJJ9 Photosystem I P700 chlorophyll a apoprotein A2

1.3e-44

96.59

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Query:  LTIGPGDFLVHHAIALGLHTTTLILVKGVLDARGSKLMSDKKDFGYSFPCDGPGRVGTCDISAWDAFYLSVFWMLNTIGWVTFYWHWK
        LTIGPGDFLVHHAIALGLHTTTLILVKG LDARGSKLMSDKKDFGYSFPCDGPGR GTCDISAWDAFYL+VFWMLNTIGWVTFYWHWK
Subjt:  LTIGPGDFLVHHAIALGLHTTTLILVKGVLDARGSKLMSDKKDFGYSFPCDGPGRVGTCDISAWDAFYLSVFWMLNTIGWVTFYWHWK

A0A6M3WB03 Photosystem I P700 chlorophyll a apoprotein A2

2.3e-44

96.59

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Query:  LTIGPGDFLVHHAIALGLHTTTLILVKGVLDARGSKLMSDKKDFGYSFPCDGPGRVGTCDISAWDAFYLSVFWMLNTIGWVTFYWHWK
        LTIGPGDFLVHHAIALGLHTTTLILVKG LDARGSKLM DKKDFGYSFPCDGPGR GTCDISAWDAFYLSVFWMLNTIGWVTFYWHWK
Subjt:  LTIGPGDFLVHHAIALGLHTTTLILVKGVLDARGSKLMSDKKDFGYSFPCDGPGRVGTCDISAWDAFYLSVFWMLNTIGWVTFYWHWK

A0A6S7N825 Photosystem I

1.7e-44

96.59

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Query:  LTIGPGDFLVHHAIALGLHTTTLILVKGVLDARGSKLMSDKKDFGYSFPCDGPGRVGTCDISAWDAFYLSVFWMLNTIGWVTFYWHWK
        LTIGPGDFLVHHAIALGLHTTTLILVKGVLDARGSKLM DKKDFGYSFPCDGPGR GTCDISAWDAFYL+VFWMLNTIGWVTFYWHWK
Subjt:  LTIGPGDFLVHHAIALGLHTTTLILVKGVLDARGSKLMSDKKDFGYSFPCDGPGRVGTCDISAWDAFYLSVFWMLNTIGWVTFYWHWK

K4K7K2 Photosystem I (Fragment)

1.3e-44

96.59

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Query:  LTIGPGDFLVHHAIALGLHTTTLILVKGVLDARGSKLMSDKKDFGYSFPCDGPGRVGTCDISAWDAFYLSVFWMLNTIGWVTFYWHWK
        LTIGPGDFLVHHAIALGLHTTTLILVKG LDARGSKLMSDKKDFGYSFPCDGPGR GTCDISAWDAFYL+VFWMLNTIGWVTFYWHWK
Subjt:  LTIGPGDFLVHHAIALGLHTTTLILVKGVLDARGSKLMSDKKDFGYSFPCDGPGRVGTCDISAWDAFYLSVFWMLNTIGWVTFYWHWK

SwissProt top hits

e value

%identity

Alignment

A1EA07 Photosystem I P700 chlorophyll a apoprotein A2

1.4e-46

95.45

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Query:  LTIGPGDFLVHHAIALGLHTTTLILVKGVLDARGSKLMSDKKDFGYSFPCDGPGRVGTCDISAWDAFYLSVFWMLNTIGWVTFYWHWK
        LTIGPGDFLVHHAIALGLHTTTLILVKG LDARGSKLM DKKDFGYSFPCDGPGR GTCDISAWDAFYL+VFWMLNTIGWVTFYWHWK
Subjt:  LTIGPGDFLVHHAIALGLHTTTLILVKGVLDARGSKLMSDKKDFGYSFPCDGPGRVGTCDISAWDAFYLSVFWMLNTIGWVTFYWHWK

A4QJB4 Photosystem I P700 chlorophyll a apoprotein A2

1.4e-46

95.45

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Query:  LTIGPGDFLVHHAIALGLHTTTLILVKGVLDARGSKLMSDKKDFGYSFPCDGPGRVGTCDISAWDAFYLSVFWMLNTIGWVTFYWHWK
        LTIGPGDFLVHHAIALGLHTTTLILVKG LDARGSKLM DKKDFGYSFPCDGPGR GTCDISAWDAFYL+VFWMLNTIGWVTFYWHWK
Subjt:  LTIGPGDFLVHHAIALGLHTTTLILVKGVLDARGSKLMSDKKDFGYSFPCDGPGRVGTCDISAWDAFYLSVFWMLNTIGWVTFYWHWK

A4QJJ8 Photosystem I P700 chlorophyll a apoprotein A2

1.4e-46

95.45

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Query:  LTIGPGDFLVHHAIALGLHTTTLILVKGVLDARGSKLMSDKKDFGYSFPCDGPGRVGTCDISAWDAFYLSVFWMLNTIGWVTFYWHWK
        LTIGPGDFLVHHAIALGLHTTTLILVKG LDARGSKLM DKKDFGYSFPCDGPGR GTCDISAWDAFYL+VFWMLNTIGWVTFYWHWK
Subjt:  LTIGPGDFLVHHAIALGLHTTTLILVKGVLDARGSKLMSDKKDFGYSFPCDGPGRVGTCDISAWDAFYLSVFWMLNTIGWVTFYWHWK

Q33332 Photosystem I P700 chlorophyll a apoprotein A2

1.4e-46

95.45

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Query:  LTIGPGDFLVHHAIALGLHTTTLILVKGVLDARGSKLMSDKKDFGYSFPCDGPGRVGTCDISAWDAFYLSVFWMLNTIGWVTFYWHWK
        LTIGPGDFLVHHAIALGLHTTTLILVKG LDARGSKLM DKKDFGYSFPCDGPGR GTCDISAWDAFYL+VFWMLNTIGWVTFYWHWK
Subjt:  LTIGPGDFLVHHAIALGLHTTTLILVKGVLDARGSKLMSDKKDFGYSFPCDGPGRVGTCDISAWDAFYLSVFWMLNTIGWVTFYWHWK

Q3V535 Photosystem I P700 chlorophyll a apoprotein A2

1.4e-46

95.45

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Query:  LTIGPGDFLVHHAIALGLHTTTLILVKGVLDARGSKLMSDKKDFGYSFPCDGPGRVGTCDISAWDAFYLSVFWMLNTIGWVTFYWHWK
        LTIGPGDFLVHHAIALGLHTTTLILVKG LDARGSKLM DKKDFGYSFPCDGPGR GTCDISAWDAFYL+VFWMLNTIGWVTFYWHWK
Subjt:  LTIGPGDFLVHHAIALGLHTTTLILVKGVLDARGSKLMSDKKDFGYSFPCDGPGRVGTCDISAWDAFYLSVFWMLNTIGWVTFYWHWK

Arabidopsis top hits

e value

%identity

Alignment

ATCG00340.1 Photosystem I, PsaA/PsaB protein

9.7e-48

95.45

Show/hide

Query:  LTIGPGDFLVHHAIALGLHTTTLILVKGVLDARGSKLMSDKKDFGYSFPCDGPGRVGTCDISAWDAFYLSVFWMLNTIGWVTFYWHWK
        LTIGPGDFLVHHAIALGLHTTTLILVKG LDARGSKLM DKKDFGYSFPCDGPGR GTCDISAWDAFYL+VFWMLNTIGWVTFYWHWK
Subjt:  LTIGPGDFLVHHAIALGLHTTTLILVKGVLDARGSKLMSDKKDFGYSFPCDGPGRVGTCDISAWDAFYLSVFWMLNTIGWVTFYWHWK

ATCG00350.1 Photosystem I, PsaA/PsaB protein

4.0e-25

55.68

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Query:  LTIGPGDFLVHHAIALGLHTTTLILVKGVLDARGSKLMSDKKDFGYSFPCDGPGRVGTCDISAWDAFYLSVFWMLNTIGWVTFYWHWK
        + +G  DFLVHH  A  +H T LIL+KGVL AR S+L+ DK + G+ FPCDGPGR GTC +SAWD  +L +FWM N I  V F++ WK
Subjt:  LTIGPGDFLVHHAIALGLHTTTLILVKGVLDARGSKLMSDKKDFGYSFPCDGPGRVGTCDISAWDAFYLSVFWMLNTIGWVTFYWHWK

Sequences

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CDS sequence

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TTGACAATAGGACCCGGCGACTTCTTGGTTCATCATGCTATTGCTTTAGGTTTACATACAACTACATTGATCTTAGTAAAAGGTGTTTTAGATGCACGTGGTTCCAAATT
AATGTCGGATAAAAAGGATTTTGGTTATAGTTTTCCTTGCGACGGTCCGGGACGAGTTGGTACTTGTGATATTTCGGCTTGGGACGCCTTTTATTTGTCAGTTTTCTGGA
TGTTAAATACCATTGGATGGGTTACTTTTTATTGGCATTGGAAG

mRNA sequence

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Protein sequence

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LTIGPGDFLVHHAIALGLHTTTLILVKGVLDARGSKLMSDKKDFGYSFPCDGPGRVGTCDISAWDAFYLSVFWMLNTIGWVTFYWHWK

MS008460 (gene) of Bitter gourd (TR) v1 genome