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MS008464 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008464
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPolyamine-modulated factor 1-binding protein
Genome locationscaffold4:1608422..1608884
RNA-Seq ExpressionMS008464
SyntenyMS008464
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008466349.1 PREDICTED: uncharacterized protein LOC103503784 [Cucumis melo]3.0e-2594.12Show/hide
Query:  DMSQQVQGAMENMLRMISEIDQNAVGIMEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNNRQG
        D+SQQ QGAMENMLRMISEIDQNAVGI+EDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNNR G
Subjt:  DMSQQVQGAMENMLRMISEIDQNAVGIMEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNNRQG
XP_022140976.1 uncharacterized protein LOC111011497 [Momordica charantia]1.7e-28100Show/hide
Query:  DMSQQVQGAMENMLRMISEIDQNAVGIMEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNNRQGTL
        DMSQQVQGAMENMLRMISEIDQNAVGIMEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNNRQGTL
Subjt:  DMSQQVQGAMENMLRMISEIDQNAVGIMEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNNRQGTL
XP_038898229.1 uncharacterized protein LOC120085955 isoform X1 [Benincasa hispida]2.3e-2591.43Show/hide
Query:  DMSQQVQGAMENMLRMISEIDQNAVGIMEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNNRQGTL
        D+SQQ QGAME+MLRMISEIDQNAVGI+EDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNN +GTL
Subjt:  DMSQQVQGAMENMLRMISEIDQNAVGIMEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNNRQGTL
XP_038898230.1 uncharacterized protein LOC120085955 isoform X2 [Benincasa hispida]2.3e-2591.43Show/hide
Query:  DMSQQVQGAMENMLRMISEIDQNAVGIMEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNNRQGTL
        D+SQQ QGAME+MLRMISEIDQNAVGI+EDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNN +GTL
Subjt:  DMSQQVQGAMENMLRMISEIDQNAVGIMEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNNRQGTL
XP_038898231.1 uncharacterized protein LOC120085955 isoform X3 [Benincasa hispida]2.3e-2591.43Show/hide
Query:  DMSQQVQGAMENMLRMISEIDQNAVGIMEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNNRQGTL
        D+SQQ QGAME+MLRMISEIDQNAVGI+EDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNN +GTL
Subjt:  DMSQQVQGAMENMLRMISEIDQNAVGIMEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNNRQGTL
TrEMBL top hitse value%identityAlignment
A0A1S3CR82 uncharacterized protein LOC1035037841.4e-2594.12Show/hide
Query:  DMSQQVQGAMENMLRMISEIDQNAVGIMEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNNRQG
        D+SQQ QGAMENMLRMISEIDQNAVGI+EDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNNR G
Subjt:  DMSQQVQGAMENMLRMISEIDQNAVGIMEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNNRQG
A0A5A7TBQ0 Uncharacterized protein1.4e-2594.12Show/hide
Query:  DMSQQVQGAMENMLRMISEIDQNAVGIMEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNNRQG
        D+SQQ QGAMENMLRMISEIDQNAVGI+EDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNNR G
Subjt:  DMSQQVQGAMENMLRMISEIDQNAVGIMEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNNRQG
A0A6J1CHL8 uncharacterized protein LOC1110114978.1e-29100Show/hide
Query:  DMSQQVQGAMENMLRMISEIDQNAVGIMEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNNRQGTL
        DMSQQVQGAMENMLRMISEIDQNAVGIMEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNNRQGTL
Subjt:  DMSQQVQGAMENMLRMISEIDQNAVGIMEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNNRQGTL
A0A6J1FEZ1 uncharacterized protein LOC1114434683.2e-2592.75Show/hide
Query:  MSQQVQGAMENMLRMISEIDQNAVGIMEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNNRQGTL
        +SQQ QGAMENMLRMISEIDQNAVGI+EDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNN  GTL
Subjt:  MSQQVQGAMENMLRMISEIDQNAVGIMEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNNRQGTL
A0A6J1IGC1 uncharacterized protein LOC1114766763.2e-2592.75Show/hide
Query:  MSQQVQGAMENMLRMISEIDQNAVGIMEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNNRQGTL
        +SQQ QGAMENMLRMISEIDQNAVGI+EDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNN  GTL
Subjt:  MSQQVQGAMENMLRMISEIDQNAVGIMEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNNRQGTL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G25570.1 unknown protein7.5e-1964.71Show/hide
Query:  DMSQQVQGAMENMLRMISEIDQNAVGIMEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNNRQG
        +MSQQVQ  MENML+M+ EIDQN+VGI E+IEK +  A+++K +LEEEK QFQ+AAYT+LDML+N +G
Subjt:  DMSQQVQGAMENMLRMISEIDQNAVGIMEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNNRQG
AT5G25570.2 unknown protein7.5e-1964.71Show/hide
Query:  DMSQQVQGAMENMLRMISEIDQNAVGIMEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNNRQG
        +MSQQVQ  MENML+M+ EIDQN+VGI E+IEK +  A+++K +LEEEK QFQ+AAYT+LDML+N +G
Subjt:  DMSQQVQGAMENMLRMISEIDQNAVGIMEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNNRQG
AT5G25570.3 unknown protein7.5e-1964.71Show/hide
Query:  DMSQQVQGAMENMLRMISEIDQNAVGIMEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNNRQG
        +MSQQVQ  MENML+M+ EIDQN+VGI E+IEK +  A+++K +LEEEK QFQ+AAYT+LDML+N +G
Subjt:  DMSQQVQGAMENMLRMISEIDQNAVGIMEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNNRQG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GATATGTCACAACAGGTCCAAGGGGCTATGGAGAACATGCTTAGAATGATCAGTGAAATTGATCAAAATGCTGTTGGAATAATGGAAGACATAGAGAAGTGCAGGGGTTC
TGCTCTTGACAGGAAGGGAGTCCTCGAGGAAGAGAAACAACAATTTCAGCAAGCTGCTTACACTGTTTTAGACATGCTCAACAACAGACAGGGAACGCTG
mRNA sequenceShow/hide mRNA sequence
GATATGTCACAACAGGTCCAAGGGGCTATGGAGAACATGCTTAGAATGATCAGTGAAATTGATCAAAATGCTGTTGGAATAATGGAAGACATAGAGAAGTGCAGGGGTTC
TGCTCTTGACAGGAAGGGAGTCCTCGAGGAAGAGAAACAACAATTTCAGCAAGCTGCTTACACTGTTTTAGACATGCTCAACAACAGACAGGGAACGCTG
Protein sequenceShow/hide protein sequence
DMSQQVQGAMENMLRMISEIDQNAVGIMEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNNRQGTL