CuGenDBv2

Gene ID	MS008473
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	DUF490 domain-containing protein
Genome location	scaffold4:1692930..1693863
RNA-Seq Expression	MS008473
Synteny	MS008473
Gene Ontology terms	GO:0009306 - protein secretion (biological process) GO:0009660 - amyloplast organization (biological process) GO:0005887 - integral component of plasma membrane (cellular component) GO:0009501 - amyloplast (cellular component) GO:0016874 - ligase activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6591591.1 Translocon at the inner envelope membrane of chloroplasts 236, partial [Cucurbita argyrosperma subsp. sororia]

8.4e-59

89.66

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Query:  QAARAFENQLAESILEGDGQLALKKLATATLEKLMPRIEGKGEFGQARWRLVYAPQIPSLLSVDSTNDPLKLLTGNISFGTVVEVQLGKRIQASIVRQMK
        +AARAFENQLAESILE DGQLALKKLATATLEKLMPRIEGKGEFGQARWRLVYAPQIPSLLS  +T DPLK LT NISFGTVVEVQLGKRIQASIVRQMK
Subjt:  QAARAFENQLAESILEGDGQLALKKLATATLEKLMPRIEGKGEFGQARWRLVYAPQIPSLLSVDSTNDPLKLLTGNISFGTVVEVQLGKRIQASIVRQMK

Query:  DSEMAMQWTFMYKLTSRLRMVFQS---APAQRMLVLVEYSASSLD
        +SEMAMQWTF YKLTSRLRMV QS   APAQR LVLVEYSASSLD
Subjt:  DSEMAMQWTFMYKLTSRLRMVFQS---APAQRMLVLVEYSASSLD

XP_022133551.1 uncharacterized protein LOC111006106 [Momordica charantia]

6.9e-69

99.3

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Query:  QAARAFENQLAESILEGDGQLALKKLATATLEKLMPRIEGKGEFGQARWRLVYAPQIPSLLSVDSTNDPLKLLTGNISFGTVVEVQLGKRIQASIVRQMK
        +AARAFENQLAESILEGDGQLALKKLATATLEKLMPRIEGKGEFGQARWRLVYAPQIPSLLSVDSTNDPLKLLTGNISFGTVVEVQLGKRIQASIVRQMK
Subjt:  QAARAFENQLAESILEGDGQLALKKLATATLEKLMPRIEGKGEFGQARWRLVYAPQIPSLLSVDSTNDPLKLLTGNISFGTVVEVQLGKRIQASIVRQMK

Query:  DSEMAMQWTFMYKLTSRLRMVFQSAPAQRMLVLVEYSASSLD
        DSEMAMQWTFMYKLTSRLRMVFQSAPAQRMLVLVEYSASSLD
Subjt:  DSEMAMQWTFMYKLTSRLRMVFQSAPAQRMLVLVEYSASSLD

XP_022936094.1 uncharacterized protein LOC111442799 [Cucurbita moschata]

8.4e-59

89.66

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Query:  QAARAFENQLAESILEGDGQLALKKLATATLEKLMPRIEGKGEFGQARWRLVYAPQIPSLLSVDSTNDPLKLLTGNISFGTVVEVQLGKRIQASIVRQMK
        +AARAFENQLAESILE DGQLALKKLATATLEKLMPRIEGKGEFGQARWRLVYAPQIPSLLS  +T DPLK LT NISFGTVVEVQLGKRIQASIVRQMK
Subjt:  QAARAFENQLAESILEGDGQLALKKLATATLEKLMPRIEGKGEFGQARWRLVYAPQIPSLLSVDSTNDPLKLLTGNISFGTVVEVQLGKRIQASIVRQMK

Query:  DSEMAMQWTFMYKLTSRLRMVFQS---APAQRMLVLVEYSASSLD
        +SEMAMQWTF YKLTSRLRMV QS   APAQR LVLVEYSASSLD
Subjt:  DSEMAMQWTFMYKLTSRLRMVFQS---APAQRMLVLVEYSASSLD

XP_022976080.1 uncharacterized protein LOC111476591 [Cucurbita maxima]

8.4e-59

89.66

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Query:  QAARAFENQLAESILEGDGQLALKKLATATLEKLMPRIEGKGEFGQARWRLVYAPQIPSLLSVDSTNDPLKLLTGNISFGTVVEVQLGKRIQASIVRQMK
        +AARAFENQLAESILE DGQLALKKLATATLEKLMPRIEGKGEFGQARWRLVYAPQIPSLLS  +T DPLK LT NISFGTVVEVQLGKRIQASIVRQMK
Subjt:  QAARAFENQLAESILEGDGQLALKKLATATLEKLMPRIEGKGEFGQARWRLVYAPQIPSLLSVDSTNDPLKLLTGNISFGTVVEVQLGKRIQASIVRQMK

Query:  DSEMAMQWTFMYKLTSRLRMVFQS---APAQRMLVLVEYSASSLD
        +SEMAMQWTF YKLTSRLRMV QS   APAQR LVLVEYSASSLD
Subjt:  DSEMAMQWTFMYKLTSRLRMVFQS---APAQRMLVLVEYSASSLD

XP_038897772.1 protein TIC236, chloroplastic [Benincasa hispida]

3.8e-59

89.66

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Query:  QAARAFENQLAESILEGDGQLALKKLATATLEKLMPRIEGKGEFGQARWRLVYAPQIPSLLSVDSTNDPLKLLTGNISFGTVVEVQLGKRIQASIVRQMK
        +AARAFENQLAESILEGDGQLALKKLATATLEKLMPRIEGKGEFGQARWRLVYAPQIP+LLS  +T DPLK LT NISFGTVVEVQLGKRIQASIVRQMK
Subjt:  QAARAFENQLAESILEGDGQLALKKLATATLEKLMPRIEGKGEFGQARWRLVYAPQIPSLLSVDSTNDPLKLLTGNISFGTVVEVQLGKRIQASIVRQMK

Query:  DSEMAMQWTFMYKLTSRLRMVFQS---APAQRMLVLVEYSASSLD
        +SEMAMQWTF YKLTSRLRMV QS   APAQR LVLVEYSASSLD
Subjt:  DSEMAMQWTFMYKLTSRLRMVFQS---APAQRMLVLVEYSASSLD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LEE3 Uncharacterized protein

5.5e-56

83.8

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Query:  QAARAFENQLAESILEGDGQLALKKLATATLEKLMPRIEGKGEFGQARWRLVYAPQIPSLLSVDSTNDPLKLLTGNISFGTVVEVQLGKRIQASIVRQMK
        +A RAFENQLAESILE  GQLAL+KLATATLEKLMPRIEGKGEFGQA WRLVYAPQIP+LLS  +T DPL+ LT NISFGTVVEVQLGKRIQAS++RQMK
Subjt:  QAARAFENQLAESILEGDGQLALKKLATATLEKLMPRIEGKGEFGQARWRLVYAPQIPSLLSVDSTNDPLKLLTGNISFGTVVEVQLGKRIQASIVRQMK

Query:  DSEMAMQWTFMYKLTSRLRMVFQSAPAQRMLVLVEYSASSLD
        ++EMAMQWTF YKLTSRLRMV QSAPAQR L+LVEYSA+SLD
Subjt:  DSEMAMQWTFMYKLTSRLRMVFQSAPAQRMLVLVEYSASSLD

A0A6A3CAX7 Uncharacterized protein

8.0e-55

82.39

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Query:  QAARAFENQLAESILEGDGQLALKKLATATLEKLMPRIEGKGEFGQARWRLVYAPQIPSLLSVDSTNDPLKLLTGNISFGTVVEVQLGKRIQASIVRQMK
        +AAR FE+QLAESILEGDGQLA KKLATATLE LMPRIEGKGEFGQARWRLVYAPQIPSLLSVD T DPLK L  NISFGT VEVQLGKR+QASIVRQ+K
Subjt:  QAARAFENQLAESILEGDGQLALKKLATATLEKLMPRIEGKGEFGQARWRLVYAPQIPSLLSVDSTNDPLKLLTGNISFGTVVEVQLGKRIQASIVRQMK

Query:  DSEMAMQWTFMYKLTSRLRMVFQSAPAQRMLVLVEYSASSLD
        DSEMAMQWT +YKLTSRLR++ QSAP++R+  L EYSASS D
Subjt:  DSEMAMQWTFMYKLTSRLRMVFQSAPAQRMLVLVEYSASSLD

A0A6J1BWB5 uncharacterized protein LOC111006106

3.3e-69

99.3

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Query:  QAARAFENQLAESILEGDGQLALKKLATATLEKLMPRIEGKGEFGQARWRLVYAPQIPSLLSVDSTNDPLKLLTGNISFGTVVEVQLGKRIQASIVRQMK
        +AARAFENQLAESILEGDGQLALKKLATATLEKLMPRIEGKGEFGQARWRLVYAPQIPSLLSVDSTNDPLKLLTGNISFGTVVEVQLGKRIQASIVRQMK
Subjt:  QAARAFENQLAESILEGDGQLALKKLATATLEKLMPRIEGKGEFGQARWRLVYAPQIPSLLSVDSTNDPLKLLTGNISFGTVVEVQLGKRIQASIVRQMK

Query:  DSEMAMQWTFMYKLTSRLRMVFQSAPAQRMLVLVEYSASSLD
        DSEMAMQWTFMYKLTSRLRMVFQSAPAQRMLVLVEYSASSLD
Subjt:  DSEMAMQWTFMYKLTSRLRMVFQSAPAQRMLVLVEYSASSLD

A0A6J1F7B9 uncharacterized protein LOC111442799

4.1e-59

89.66

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Query:  QAARAFENQLAESILEGDGQLALKKLATATLEKLMPRIEGKGEFGQARWRLVYAPQIPSLLSVDSTNDPLKLLTGNISFGTVVEVQLGKRIQASIVRQMK
        +AARAFENQLAESILE DGQLALKKLATATLEKLMPRIEGKGEFGQARWRLVYAPQIPSLLS  +T DPLK LT NISFGTVVEVQLGKRIQASIVRQMK
Subjt:  QAARAFENQLAESILEGDGQLALKKLATATLEKLMPRIEGKGEFGQARWRLVYAPQIPSLLSVDSTNDPLKLLTGNISFGTVVEVQLGKRIQASIVRQMK

Query:  DSEMAMQWTFMYKLTSRLRMVFQS---APAQRMLVLVEYSASSLD
        +SEMAMQWTF YKLTSRLRMV QS   APAQR LVLVEYSASSLD
Subjt:  DSEMAMQWTFMYKLTSRLRMVFQS---APAQRMLVLVEYSASSLD

A0A6J1III6 uncharacterized protein LOC111476591

4.1e-59

89.66

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Query:  QAARAFENQLAESILEGDGQLALKKLATATLEKLMPRIEGKGEFGQARWRLVYAPQIPSLLSVDSTNDPLKLLTGNISFGTVVEVQLGKRIQASIVRQMK
        +AARAFENQLAESILE DGQLALKKLATATLEKLMPRIEGKGEFGQARWRLVYAPQIPSLLS  +T DPLK LT NISFGTVVEVQLGKRIQASIVRQMK
Subjt:  QAARAFENQLAESILEGDGQLALKKLATATLEKLMPRIEGKGEFGQARWRLVYAPQIPSLLSVDSTNDPLKLLTGNISFGTVVEVQLGKRIQASIVRQMK

Query:  DSEMAMQWTFMYKLTSRLRMVFQS---APAQRMLVLVEYSASSLD
        +SEMAMQWTF YKLTSRLRMV QS   APAQR LVLVEYSASSLD
Subjt:  DSEMAMQWTFMYKLTSRLRMVFQS---APAQRMLVLVEYSASSLD

SwissProt top hits

e value

%identity

Alignment

F4ISL7 Protein TIC236, chloroplastic

2.6e-55

78.32

Show/hide

Query:  AQAARAFENQLAESILEGDGQLALKKLATATLEKLMPRIEGKGEFGQARWRLVYAPQIPSLLSVDSTNDPLKLLTGNISFGTVVEVQLGKRIQASIVRQM
        ++AA+ FE+QLAESILEGDGQLA KKLATATL  +MPRIEGKGEFGQARWRLVYAPQIPSLLSVD T DPLK L  NISFGT VEVQLGKR+QAS+VRQM
Subjt:  AQAARAFENQLAESILEGDGQLALKKLATATLEKLMPRIEGKGEFGQARWRLVYAPQIPSLLSVDSTNDPLKLLTGNISFGTVVEVQLGKRIQASIVRQM

Query:  KDSEMAMQWTFMYKLTSRLRMVFQSAPAQRMLVLVEYSASSLD
        KDSEMAMQWT +Y+LTSRLR++ QSAP++R+  L EYSA+S D
Subjt:  KDSEMAMQWTFMYKLTSRLRMVFQSAPAQRMLVLVEYSASSLD

W0RYD3 Protein SUBSTANDARD STARCH GRAIN 4, chloroplastic

1.3e-54

78.01

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Query:  AQAARAFENQLAESILEGDGQLALKKLATATLEKLMPRIEGKGEFGQARWRLVYAPQIPSLLSVDSTNDPLKLLTGNISFGTVVEVQLGKRIQASIVRQM
        ++AA+ FE+QLAES+LEGDGQLA KKLATATLE LMPRIEGKGEFGQARWRLVYAPQIPSLLSVD T DPLK L  NISF T VEVQLGKR+QAS+VRQM
Subjt:  AQAARAFENQLAESILEGDGQLALKKLATATLEKLMPRIEGKGEFGQARWRLVYAPQIPSLLSVDSTNDPLKLLTGNISFGTVVEVQLGKRIQASIVRQM

Query:  KDSEMAMQWTFMYKLTSRLRMVFQSAPAQRMLVLVEYSASS
        KDSEMAMQW+ +Y+LTSRLR++FQS P+ R+  L EYSA+S
Subjt:  KDSEMAMQWTFMYKLTSRLRMVFQSAPAQRMLVLVEYSASS

Arabidopsis top hits

e value

%identity

Alignment

AT2G25660.1 embryo defective 2410

1.9e-56

78.32

Show/hide

Query:  AQAARAFENQLAESILEGDGQLALKKLATATLEKLMPRIEGKGEFGQARWRLVYAPQIPSLLSVDSTNDPLKLLTGNISFGTVVEVQLGKRIQASIVRQM
        ++AA+ FE+QLAESILEGDGQLA KKLATATL  +MPRIEGKGEFGQARWRLVYAPQIPSLLSVD T DPLK L  NISFGT VEVQLGKR+QAS+VRQM
Subjt:  AQAARAFENQLAESILEGDGQLALKKLATATLEKLMPRIEGKGEFGQARWRLVYAPQIPSLLSVDSTNDPLKLLTGNISFGTVVEVQLGKRIQASIVRQM

Query:  KDSEMAMQWTFMYKLTSRLRMVFQSAPAQRMLVLVEYSASSLD
        KDSEMAMQWT +Y+LTSRLR++ QSAP++R+  L EYSA+S D
Subjt:  KDSEMAMQWTFMYKLTSRLRMVFQSAPAQRMLVLVEYSASSLD

Sequences

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CDS sequence

Show/hide CDS sequence

TTGGCTCAGGCTGCTCGTGCATTTGAGAATCAATTGGCAGAATCGATATTGGAGGGCGATGGCCAGCTGGCACTGAAGAAGCTTGCAACTGCTACACTTGAGAAACTAAT
GCCTAGAATAGAAGGAAAAGGTGAATTTGGTCAGGCTAGGTGGAGGCTTGTGTATGCTCCACAAATCCCAAGTTTACTCTCCGTTGATTCAACCAACGATCCTCTCAAAT
TACTCACCGGTAACATCTCATTTGGTACTGTAGTTGAAGTCCAGCTCGGAAAGCGCATTCAGGCCTCCATAGTTCGGCAGATGAAGGACTCGGAGATGGCCATGCAATGG
ACGTTCATGTACAAGCTTACGAGCCGCTTGCGGATGGTCTTTCAGTCAGCTCCAGCTCAGCGAATGCTCGTACTTGTCGAATATTCCGCTTCATCACTGGAT

mRNA sequence

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Protein sequence

Show/hide protein sequence

LAQAARAFENQLAESILEGDGQLALKKLATATLEKLMPRIEGKGEFGQARWRLVYAPQIPSLLSVDSTNDPLKLLTGNISFGTVVEVQLGKRIQASIVRQMKDSEMAMQW
TFMYKLTSRLRMVFQSAPAQRMLVLVEYSASSLD

MS008473 (gene) of Bitter gourd (TR) v1 genome