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MS008480 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008480
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold4:1732639..1733193
RNA-Seq ExpressionMS008480
SyntenyMS008480
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608173.1 hypothetical protein SDJN03_01515, partial [Cucurbita argyrosperma subsp. sororia]1.1e-5077.55Show/hide
Query:  MALRVNCSASVFLLPRAPDSNSFDTSKAARLSLKEGEGSW--RSRCALGLASLILAIEFGNAFVAGEIQALESPPPPQLVDSRRMKISRWSDKRKCAPWR
        M L +NCS+SV LLPRAPDSNSFD+SK ARLS K+  G+W  RSRCALGLASLILAIEFG+  VA E QALES  PPQ+VDSRR+KISRWSDKRKCA WR
Subjt:  MALRVNCSASVFLLPRAPDSNSFDTSKAARLSLKEGEGSW--RSRCALGLASLILAIEFGNAFVAGEIQALESPPPPQLVDSRRMKISRWSDKRKCAPWR

Query:  ANSLENIVPENLPRPSQRRKWETVTFTVDVETNAPAIQVISSETNSK
        ANSLE IVPENLPRPSQRRKWET+ FT DVE NAPA+QVISS+  SK
Subjt:  ANSLENIVPENLPRPSQRRKWETVTFTVDVETNAPAIQVISSETNSK

XP_022138217.1 uncharacterized protein LOC111009442 isoform X1 [Momordica charantia]4.9e-78100Show/hide
Query:  MALRVNCSASVFLLPRAPDSNSFDTSKAARLSLKEGEGSWRSRCALGLASLILAIEFGNAFVAGEIQALESPPPPQLVDSRRMKISRWSDKRKCAPWRAN
        MALRVNCSASVFLLPRAPDSNSFDTSKAARLSLKEGEGSWRSRCALGLASLILAIEFGNAFVAGEIQALESPPPPQLVDSRRMKISRWSDKRKCAPWRAN
Subjt:  MALRVNCSASVFLLPRAPDSNSFDTSKAARLSLKEGEGSWRSRCALGLASLILAIEFGNAFVAGEIQALESPPPPQLVDSRRMKISRWSDKRKCAPWRAN

Query:  SLENIVPENLPRPSQRRKWETVTFTVDVETNAPAIQVISSETNSKYCFSL
        SLENIVPENLPRPSQRRKWETVTFTVDVETNAPAIQVISSETNSKYCFSL
Subjt:  SLENIVPENLPRPSQRRKWETVTFTVDVETNAPAIQVISSETNSKYCFSL

XP_022138227.1 uncharacterized protein LOC111009442 isoform X2 [Momordica charantia]6.5e-70100Show/hide
Query:  MALRVNCSASVFLLPRAPDSNSFDTSKAARLSLKEGEGSWRSRCALGLASLILAIEFGNAFVAGEIQALESPPPPQLVDSRRMKISRWSDKRKCAPWRAN
        MALRVNCSASVFLLPRAPDSNSFDTSKAARLSLKEGEGSWRSRCALGLASLILAIEFGNAFVAGEIQALESPPPPQLVDSRRMKISRWSDKRKCAPWRAN
Subjt:  MALRVNCSASVFLLPRAPDSNSFDTSKAARLSLKEGEGSWRSRCALGLASLILAIEFGNAFVAGEIQALESPPPPQLVDSRRMKISRWSDKRKCAPWRAN

Query:  SLENIVPENLPRPSQRRKWETVTFTVDVETNAPAIQ
        SLENIVPENLPRPSQRRKWETVTFTVDVETNAPAIQ
Subjt:  SLENIVPENLPRPSQRRKWETVTFTVDVETNAPAIQ

XP_023524416.1 uncharacterized protein LOC111788320 [Cucurbita pepo subsp. pepo]6.5e-5477.63Show/hide
Query:  MALRVNCSASVFLLPRAPDSNSFDTSKAARLSLKEGEGSW--RSRCALGLASLILAIEFGNAFVAGEIQALESPPPPQLVDSRRMKISRWSDKRKCAPWR
        M L +NCS+SV LLPRAPDSNSFD+SK ARLS K+ +G+W  RSRCALGLASLILAIEFG+  VA E QALES  PPQ+VDSRR+KISRWSDKRKCA WR
Subjt:  MALRVNCSASVFLLPRAPDSNSFDTSKAARLSLKEGEGSW--RSRCALGLASLILAIEFGNAFVAGEIQALESPPPPQLVDSRRMKISRWSDKRKCAPWR

Query:  ANSLENIVPENLPRPSQRRKWETVTFTVDVETNAPAIQVISSETNSKYCFSL
        ANSLE IVPENLPRPSQRRKWE + FT DVE NAPA+QVISS+  SKYCFSL
Subjt:  ANSLENIVPENLPRPSQRRKWETVTFTVDVETNAPAIQVISSETNSKYCFSL

XP_038899075.1 uncharacterized protein LOC120086473 [Benincasa hispida]4.8e-4971.79Show/hide
Query:  MALRVNC-SASVFLLPRAPDSNSFDTSKAARLSLKEGEGSWRSR--CALGLASLILAIEFGNAFVAGEIQALESPPPPQLVD--SRRMKISRWSDKRKCA
        MALR++C S+SVFLLP+APDSNSFD++K ARLS+KE EGSWRSR  C LGLASLI AIE  + FVA E  ALES  PPQLVD   +R+KISRWSDKRKCA
Subjt:  MALRVNC-SASVFLLPRAPDSNSFDTSKAARLSLKEGEGSWRSR--CALGLASLILAIEFGNAFVAGEIQALESPPPPQLVD--SRRMKISRWSDKRKCA

Query:  PWRANSLENIVPENLPRPSQRRKWETVTF-TVDVETNAPAIQVISSETNSKYCFSL
        PWRANSLE IVPENLPRPS RRKWE + + ++DV+ NAP I+VISS+T+S YCFSL
Subjt:  PWRANSLENIVPENLPRPSQRRKWETVTF-TVDVETNAPAIQVISSETNSKYCFSL

TrEMBL top hitse value%identityAlignment
A0A5A7TBN7 Uncharacterized protein3.6e-4266.04Show/hide
Query:  MALRVNC-SASVFLLPRAPDSNSFDTSKAARLSLKEGEGSWRSR--CALGLASLILAIEFGNAFVAGEIQALESPPPPQLVD---SRRM-KISRWSDK-R
        MAL +NC S+SVFLLP+ P  NSFD++K A+L LKE  GSWRSR  CALGLASLI AIE G+ F+A E  ALES   PQLVD    RRM KI RWSD+ R
Subjt:  MALRVNC-SASVFLLPRAPDSNSFDTSKAARLSLKEGEGSWRSR--CALGLASLILAIEFGNAFVAGEIQALESPPPPQLVD---SRRM-KISRWSDK-R

Query:  KCAPWRANSLENIVPENLPRPSQRRKWETVTFT-VDVETNAPAIQVISSETNSKYCFSL
        KCAPWRA SLE IVPENLPRPSQRRK E + +  +D++ NAP +QVISSE +S YCFSL
Subjt:  KCAPWRANSLENIVPENLPRPSQRRKWETVTFT-VDVETNAPAIQVISSETNSKYCFSL

A0A6J1CAG3 uncharacterized protein LOC111009442 isoform X12.4e-78100Show/hide
Query:  MALRVNCSASVFLLPRAPDSNSFDTSKAARLSLKEGEGSWRSRCALGLASLILAIEFGNAFVAGEIQALESPPPPQLVDSRRMKISRWSDKRKCAPWRAN
        MALRVNCSASVFLLPRAPDSNSFDTSKAARLSLKEGEGSWRSRCALGLASLILAIEFGNAFVAGEIQALESPPPPQLVDSRRMKISRWSDKRKCAPWRAN
Subjt:  MALRVNCSASVFLLPRAPDSNSFDTSKAARLSLKEGEGSWRSRCALGLASLILAIEFGNAFVAGEIQALESPPPPQLVDSRRMKISRWSDKRKCAPWRAN

Query:  SLENIVPENLPRPSQRRKWETVTFTVDVETNAPAIQVISSETNSKYCFSL
        SLENIVPENLPRPSQRRKWETVTFTVDVETNAPAIQVISSETNSKYCFSL
Subjt:  SLENIVPENLPRPSQRRKWETVTFTVDVETNAPAIQVISSETNSKYCFSL

A0A6J1CAH3 uncharacterized protein LOC111009442 isoform X23.1e-70100Show/hide
Query:  MALRVNCSASVFLLPRAPDSNSFDTSKAARLSLKEGEGSWRSRCALGLASLILAIEFGNAFVAGEIQALESPPPPQLVDSRRMKISRWSDKRKCAPWRAN
        MALRVNCSASVFLLPRAPDSNSFDTSKAARLSLKEGEGSWRSRCALGLASLILAIEFGNAFVAGEIQALESPPPPQLVDSRRMKISRWSDKRKCAPWRAN
Subjt:  MALRVNCSASVFLLPRAPDSNSFDTSKAARLSLKEGEGSWRSRCALGLASLILAIEFGNAFVAGEIQALESPPPPQLVDSRRMKISRWSDKRKCAPWRAN

Query:  SLENIVPENLPRPSQRRKWETVTFTVDVETNAPAIQ
        SLENIVPENLPRPSQRRKWETVTFTVDVETNAPAIQ
Subjt:  SLENIVPENLPRPSQRRKWETVTFTVDVETNAPAIQ

A0A6J1FJG9 uncharacterized protein LOC1114460152.0e-4078.99Show/hide
Query:  KEGEGSW--RSRCALGLASLILAIEFGNAFVAGEIQALESPPPPQLVDSRRMKISRWSDKRKCAPWRANSLENIVPENLPRPSQRRKWETVTFTVDVETN
        K+  G+W  RSRCALGLASLILAIEFG+  VA E QALES  PPQ+VDSRR+KISRWSDKRKCA WRANSLE IVPENLPRPSQRRKWET+ FT DVE N
Subjt:  KEGEGSW--RSRCALGLASLILAIEFGNAFVAGEIQALESPPPPQLVDSRRMKISRWSDKRKCAPWRANSLENIVPENLPRPSQRRKWETVTFTVDVETN

Query:  APAIQVISSETNSKYCFSL
        APA+QVISS+  SKYCFSL
Subjt:  APAIQVISSETNSKYCFSL

A0A6J1J2V8 uncharacterized protein LOC1114807832.6e-4878.26Show/hide
Query:  MALRVNCSASVFLLPRAPDSNSFDTSKAARLSLKEGEGSW--RSRCALGLASLILAIEFGNAFVAGEIQALESPPPPQLVDSRRMKISRWSDKRKCAPWR
        M L +NCS+SV LLPRAPDSNSFD+SK ARLS K+  G+W  RSRCALGLASLILAIEFG+  VA E QALES  PPQ+VDSRR+KISRWSDKRKCA WR
Subjt:  MALRVNCSASVFLLPRAPDSNSFDTSKAARLSLKEGEGSW--RSRCALGLASLILAIEFGNAFVAGEIQALESPPPPQLVDSRRMKISRWSDKRKCAPWR

Query:  ANSLENIVPENLPRPSQRRKWETVTFTVDVETNAPAIQ
        ANSLE IVPENLPRPSQRRKWET+ FT DVE NAPA+Q
Subjt:  ANSLENIVPENLPRPSQRRKWETVTFTVDVETNAPAIQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G25625.1 unknown protein4.3e-1130.86Show/hide
Query:  MALRVNCSASVFLLPRAPDSNSFDT-----SKAARLSLKEGEGSW---RSRCA--LGLASLIL--AIEFGNAFVAGEIQALESPPPPQLVDSRRMKISRW
        MA R++C  ++  L    DSNS  +        +++S +  E      +++C+  LG+A+ ++   I+  +      ++A     P + + +  +   RW
Subjt:  MALRVNCSASVFLLPRAPDSNSFDT-----SKAARLSLKEGEGSW---RSRCA--LGLASLIL--AIEFGNAFVAGEIQALESPPPPQLVDSRRMKISRW

Query:  SDKRKCAPWRANSLENIVPENLPRPSQRRKWETVTFTVDVETNAPAIQVISSETNSKYCFSL
        SDKR C PW  NSLE IVPENLPRPS  R+ E        + +AP + V+ +  N   CFS+
Subjt:  SDKRKCAPWRANSLENIVPENLPRPSQRRKWETVTFTVDVETNAPAIQVISSETNSKYCFSL

AT2G25625.2 unknown protein1.5e-1130.67Show/hide
Query:  MALRVNCSASVFLLPRAPDSNSFDTSKAARLSLKEGEGSWR---------SRCA--LGLASLIL--AIEFGNAFVAGEIQALESPPPPQLVDSRRMKISR
        MA R++C  ++      P  +S      A L     + SWR         ++C+  LG+A+ ++   I+  +      ++A     P + + +  +   R
Subjt:  MALRVNCSASVFLLPRAPDSNSFDTSKAARLSLKEGEGSWR---------SRCA--LGLASLIL--AIEFGNAFVAGEIQALESPPPPQLVDSRRMKISR

Query:  WSDKRKCAPWRANSLENIVPENLPRPSQRRKWETVTFTVDVETNAPAIQVISSETNSKYCFSL
        WSDKR C PW  NSLE IVPENLPRPS  R+ E        + +AP + V+ +  N   CFS+
Subjt:  WSDKRKCAPWRANSLENIVPENLPRPSQRRKWETVTFTVDVETNAPAIQVISSETNSKYCFSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTGAGAGTCAATTGTTCAGCGTCAGTTTTTCTCCTTCCACGAGCTCCCGATTCAAATTCCTTTGATACTTCAAAAGCCGCTCGATTGTCCTTGAAGGAAGGTGA
AGGATCGTGGAGAAGCCGCTGCGCATTAGGTTTAGCGAGCTTGATTCTCGCAATCGAATTCGGCAACGCCTTCGTCGCCGGCGAAATTCAGGCTCTCGAATCGCCACCGC
CGCCGCAACTTGTTGATTCGAGGCGGATGAAGATCTCGAGATGGAGCGACAAGAGAAAATGCGCTCCGTGGAGAGCGAATTCGCTCGAGAACATCGTGCCGGAGAACCTC
CCGAGACCGTCGCAGCGCCGGAAGTGGGAGACAGTTACATTTACGGTGGATGTAGAAACTAACGCTCCGGCGATCCAAGTAATTTCTTCTGAAACTAACTCCAAATATTG
TTTCTCTTTA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTGAGAGTCAATTGTTCAGCGTCAGTTTTTCTCCTTCCACGAGCTCCCGATTCAAATTCCTTTGATACTTCAAAAGCCGCTCGATTGTCCTTGAAGGAAGGTGA
AGGATCGTGGAGAAGCCGCTGCGCATTAGGTTTAGCGAGCTTGATTCTCGCAATCGAATTCGGCAACGCCTTCGTCGCCGGCGAAATTCAGGCTCTCGAATCGCCACCGC
CGCCGCAACTTGTTGATTCGAGGCGGATGAAGATCTCGAGATGGAGCGACAAGAGAAAATGCGCTCCGTGGAGAGCGAATTCGCTCGAGAACATCGTGCCGGAGAACCTC
CCGAGACCGTCGCAGCGCCGGAAGTGGGAGACAGTTACATTTACGGTGGATGTAGAAACTAACGCTCCGGCGATCCAAGTAATTTCTTCTGAAACTAACTCCAAATATTG
TTTCTCTTTA
Protein sequenceShow/hide protein sequence
MALRVNCSASVFLLPRAPDSNSFDTSKAARLSLKEGEGSWRSRCALGLASLILAIEFGNAFVAGEIQALESPPPPQLVDSRRMKISRWSDKRKCAPWRANSLENIVPENL
PRPSQRRKWETVTFTVDVETNAPAIQVISSETNSKYCFSL