; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS008494 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008494
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein mago nashi homolog
Genome locationscaffold4:1804632..1807074
RNA-Seq ExpressionMS008494
SyntenyMS008494
Gene Ontology termsGO:0008380 - RNA splicing (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0035145 - exon-exon junction complex (cellular component)
InterPro domainsIPR004023 - Mago nashi protein
IPR036605 - Mago nashi superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG8477318.1 hypothetical protein CXB51_030983 [Gossypium anomalum]6.0e-7286.88Show/hide
Query:  AAEDLEKGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEIYLTPAVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNE
        AAE+ + GEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKE++LTPAVL+ECRRII++SEIMKEDDNNWPEPDRVGRQELEIVMGNE
Subjt:  AAEDLEKGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEIYLTPAVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNE

Query:  HISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQVKLNSPRRSEMLCIFSHFTPLQDQANLK
        HISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQV      R E+LCI S+ TPLQDQA LK
Subjt:  HISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQVKLNSPRRSEMLCIFSHFTPLQDQANLK

MBA0610317.1 hypothetical protein [Gossypium davidsonii]3.9e-7182.63Show/hide
Query:  AAEDLEKGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEIYLTPAVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNE
        AAE+ E GEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKE++LTPAVL+ECRRII++SEIMKEDDNNWPEPDRVGRQELEIVMGNE
Subjt:  AAEDLEKGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEIYLTPAVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNE

Query:  HISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQVKLNSPRRSEMLCIFSHFTPLQDQANLKTGQSCFC
        HISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQ         E+LC+ SH  PLQDQA LK      C
Subjt:  HISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQVKLNSPRRSEMLCIFSHFTPLQDQANLKTGQSCFC

MBA0617239.1 hypothetical protein [Gossypium davidsonii]1.9e-7085.62Show/hide
Query:  AAEDLEKGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEIYLTPAVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNE
        AAE+ + GEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKE++LTPAVL+ECRRII++SEIMKEDDNNWPEPDRVGRQELEIVMGNE
Subjt:  AAEDLEKGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEIYLTPAVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNE

Query:  HISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQVKLNSPRRSEMLCIFSHFTPLQDQANLK
        HISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQ         E+LCI S+ TPLQDQA LK
Subjt:  HISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQVKLNSPRRSEMLCIFSHFTPLQDQANLK

MBA0831610.1 hypothetical protein [Gossypium armourianum]1.9e-7085.62Show/hide
Query:  AAEDLEKGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEIYLTPAVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNE
        AAE+ + GEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKE++LTPAVL+ECRRII++SEIMKEDDNNWPEPDRVGRQELEIVMGNE
Subjt:  AAEDLEKGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEIYLTPAVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNE

Query:  HISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQVKLNSPRRSEMLCIFSHFTPLQDQANLK
        HISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQ         E+LCI S+ TPLQDQA LK
Subjt:  HISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQVKLNSPRRSEMLCIFSHFTPLQDQANLK

MBA0831611.1 hypothetical protein [Gossypium armourianum]6.0e-7286.88Show/hide
Query:  AAEDLEKGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEIYLTPAVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNE
        AAE+ + GEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKE++LTPAVL+ECRRII++SEIMKEDDNNWPEPDRVGRQELEIVMGNE
Subjt:  AAEDLEKGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEIYLTPAVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNE

Query:  HISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQVKLNSPRRSEMLCIFSHFTPLQDQANLK
        HISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQV      R E+LCI S+ TPLQDQA LK
Subjt:  HISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQVKLNSPRRSEMLCIFSHFTPLQDQANLK

TrEMBL top hitse value%identityAlignment
A0A6J1BUD1 protein mago nashi homolog2.1e-70100Show/hide
Query:  AAAEDLEKGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEIYLTPAVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGN
        AAAEDLEKGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEIYLTPAVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGN
Subjt:  AAAEDLEKGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEIYLTPAVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGN

Query:  EHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQ
        EHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQ
Subjt:  EHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQ

A0A7J8R8Z1 Uncharacterized protein1.9e-7182.63Show/hide
Query:  AAEDLEKGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEIYLTPAVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNE
        AAE+ E GEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKE++LTPAVL+ECRRII++SEIMKEDDNNWPEPDRVGRQELEIVMGNE
Subjt:  AAEDLEKGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEIYLTPAVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNE

Query:  HISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQVKLNSPRRSEMLCIFSHFTPLQDQANLKTGQSCFC
        HISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQ         E+LC+ SH  PLQDQA LK      C
Subjt:  HISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQVKLNSPRRSEMLCIFSHFTPLQDQANLKTGQSCFC

A0A7J8RTV5 Uncharacterized protein9.3e-7185.62Show/hide
Query:  AAEDLEKGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEIYLTPAVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNE
        AAE+ + GEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKE++LTPAVL+ECRRII++SEIMKEDDNNWPEPDRVGRQELEIVMGNE
Subjt:  AAEDLEKGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEIYLTPAVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNE

Query:  HISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQVKLNSPRRSEMLCIFSHFTPLQDQANLK
        HISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQ         E+LCI S+ TPLQDQA LK
Subjt:  HISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQVKLNSPRRSEMLCIFSHFTPLQDQANLK

A0A7J9JB26 Uncharacterized protein2.9e-7286.88Show/hide
Query:  AAEDLEKGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEIYLTPAVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNE
        AAE+ + GEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKE++LTPAVL+ECRRII++SEIMKEDDNNWPEPDRVGRQELEIVMGNE
Subjt:  AAEDLEKGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEIYLTPAVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNE

Query:  HISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQVKLNSPRRSEMLCIFSHFTPLQDQANLK
        HISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQV      R E+LCI S+ TPLQDQA LK
Subjt:  HISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQVKLNSPRRSEMLCIFSHFTPLQDQANLK

A0A7J9JB54 Uncharacterized protein9.3e-7185.62Show/hide
Query:  AAEDLEKGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEIYLTPAVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNE
        AAE+ + GEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKE++LTPAVL+ECRRII++SEIMKEDDNNWPEPDRVGRQELEIVMGNE
Subjt:  AAEDLEKGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEIYLTPAVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNE

Query:  HISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQVKLNSPRRSEMLCIFSHFTPLQDQANLK
        HISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQ         E+LCI S+ TPLQDQA LK
Subjt:  HISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQVKLNSPRRSEMLCIFSHFTPLQDQANLK

SwissProt top hitse value%identityAlignment
A0A0P0XB70 Protein mago nashi homolog 12.0e-6290.4Show/hide
Query:  GEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEIYLTPAVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTS
        GEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYK DTMIRKE++++P+VLRE  RII +SEIMKEDD+NWPEPDRVGRQELEIVMGNEHISFTTS
Subjt:  GEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEIYLTPAVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTS

Query:  KIGSLVDVQSSKDPEGLRIFYYLVQ
        KIGSLVDVQ+SKDPEGLRIFYYLVQ
Subjt:  KIGSLVDVQSSKDPEGLRIFYYLVQ

O23676 Protein mago nashi homolog4.5e-6287.4Show/hide
Query:  EKGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEIYLTPAVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFT
        E  EFYLRYYVGHKGKFGHEFLEFEFR DGKLRYANNSNYKNDT+IRKE++LTPAVL+EC+RI+S+SEI+KEDDNNWPEPDRVG+QELEIV+GNEHISF 
Subjt:  EKGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEIYLTPAVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFT

Query:  TSKIGSLVDVQSSKDPEGLRIFYYLVQ
        TSKIGSLVD QSS DPEGLRIFYYLVQ
Subjt:  TSKIGSLVDVQSSKDPEGLRIFYYLVQ

O65806 Protein mago nashi homolog6.9e-6391.27Show/hide
Query:  EKGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEIYLTPAVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFT
        E  EFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKE++LTPAVL+ECRRII++SEIMKEDD NWP PDRVGRQELEIVMGNE+ISFT
Subjt:  EKGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEIYLTPAVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFT

Query:  TSKIGSLVDVQSSKDPEGLRIFYYLV
        TSKIGSLVDVQ SKDPEGLRIFYYLV
Subjt:  TSKIGSLVDVQSSKDPEGLRIFYYLV

P49030 Protein mago nashi homolog 23.3e-6589.55Show/hide
Query:  AAAEDLE-KGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEIYLTPAVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMG
        AA ED+   GEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKE++++P+VLRE RRII +SEIMKEDDNNWPEPDRVGRQELEIVMG
Subjt:  AAAEDLE-KGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEIYLTPAVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMG

Query:  NEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQ
        NEHISFTTSKIGSLVDVQ+SKDPEGLRIFYYLVQ
Subjt:  NEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQ

Q3ZBV3 Protein mago nashi homolog1.4e-5580.95Show/hide
Query:  KGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEIYLTPAVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTT
        + +FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKND MIRKE Y+  +V+ E +RII DSEI KEDD  WP PDRVGRQELEIV+G+EHISFTT
Subjt:  KGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEIYLTPAVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTT

Query:  SKIGSLVDVQSSKDPEGLRIFYYLVQ
        SKIGSL+DV  SKDPEGLR+FYYLVQ
Subjt:  SKIGSLVDVQSSKDPEGLRIFYYLVQ

Arabidopsis top hitse value%identityAlignment
AT1G02140.1 mago nashi family protein3.2e-6387.4Show/hide
Query:  EKGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEIYLTPAVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFT
        E  EFYLRYYVGHKGKFGHEFLEFEFR DGKLRYANNSNYKNDT+IRKE++LTPAVL+EC+RI+S+SEI+KEDDNNWPEPDRVG+QELEIV+GNEHISF 
Subjt:  EKGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEIYLTPAVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFT

Query:  TSKIGSLVDVQSSKDPEGLRIFYYLVQ
        TSKIGSLVD QSS DPEGLRIFYYLVQ
Subjt:  TSKIGSLVDVQSSKDPEGLRIFYYLVQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCGGCGGCTGAGGATTTGGAGAAAGGAGAGTTTTACTTGAGATATTATGTGGGACACAAAGGGAAGTTCGGACACGAATTCTTGGAGTTCGAGTTTCGACCCGACGGAAA
GCTTCGCTACGCTAACAACTCCAACTACAAGAACGACACAATGATTCGCAAGGAAATCTACCTCACCCCTGCTGTTCTTCGGGAATGCCGTCGCATTATCTCCGACAGCG
AGATTATGAAGGAAGACGATAATAATTGGCCAGAACCTGATCGTGTGGGTCGACAGGAGCTTGAGATTGTGATGGGAAATGAGCATATCTCCTTCACCACATCTAAGATT
GGATCTCTTGTTGATGTGCAGAGCAGCAAGGATCCTGAAGGATTGCGGATATTCTATTATCTTGTTCAGGTAAAACTTAATTCACCGCGTAGATCTGAAATGCTTTGTAT
TTTCTCTCATTTCACTCCACTTCAAGATCAAGCCAATTTAAAGACTGGCCAAAGTTGCTTCTGTACTATC
mRNA sequenceShow/hide mRNA sequence
GCGGCGGCTGAGGATTTGGAGAAAGGAGAGTTTTACTTGAGATATTATGTGGGACACAAAGGGAAGTTCGGACACGAATTCTTGGAGTTCGAGTTTCGACCCGACGGAAA
GCTTCGCTACGCTAACAACTCCAACTACAAGAACGACACAATGATTCGCAAGGAAATCTACCTCACCCCTGCTGTTCTTCGGGAATGCCGTCGCATTATCTCCGACAGCG
AGATTATGAAGGAAGACGATAATAATTGGCCAGAACCTGATCGTGTGGGTCGACAGGAGCTTGAGATTGTGATGGGAAATGAGCATATCTCCTTCACCACATCTAAGATT
GGATCTCTTGTTGATGTGCAGAGCAGCAAGGATCCTGAAGGATTGCGGATATTCTATTATCTTGTTCAGGTAAAACTTAATTCACCGCGTAGATCTGAAATGCTTTGTAT
TTTCTCTCATTTCACTCCACTTCAAGATCAAGCCAATTTAAAGACTGGCCAAAGTTGCTTCTGTACTATC
Protein sequenceShow/hide protein sequence
AAAEDLEKGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEIYLTPAVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKI
GSLVDVQSSKDPEGLRIFYYLVQVKLNSPRRSEMLCIFSHFTPLQDQANLKTGQSCFCTI