CuGenDBv2

Gene ID	MS008497
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Chaperone protein DnaJ-like
Genome location	scaffold4:1825816..1826578
RNA-Seq Expression	MS008497
Synteny	MS008497
Gene Ontology terms	GO:0061077 - chaperone-mediated protein folding (biological process) GO:0009570 - chloroplast stroma (cellular component) GO:0101031 - chaperone complex (cellular component) GO:0044183 - protein folding chaperone (molecular function)
InterPro domains	IPR036410 - Heat shock protein DnaJ, cysteine-rich domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0038807.1 chaperone protein DnaJ-like [Cucumis melo var. makuwa]

2.6e-47

81.25

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Query:  AAIGGCSNHKLNLIDNGLH-YSPAARFPHLNGKAAKNDRNTKPNSMICGDCDGNGAVLCSQCKGSGVNPADVFNGQFKAGESCWLCGGKKDMLCGNCNGA
        +AI  CSN KLNLI N  H YS  ARFPHL  KAAKNDRNTKPNS+ICGDCDGNGAVLCSQCKG+GVN  D FNGQFKAG+SCWLCGG+K+MLCGNCNGA
Subjt:  AAIGGCSNHKLNLIDNGLH-YSPAARFPHLNGKAAKNDRNTKPNSMICGDCDGNGAVLCSQCKGSGVNPADVFNGQFKAGESCWLCGGKKDMLCGNCNGA

Query:  GFIGGFLSTYDQ
        GF+GGFLSTYDQ
Subjt:  GFIGGFLSTYDQ

XP_004136477.1 protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic isoform X2 [Cucumis sativus]

6.7e-48

83.04

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Query:  AAIGGCSNHKLNLIDNGLH-YSPAARFPHLNGKAAKNDRNTKPNSMICGDCDGNGAVLCSQCKGSGVNPADVFNGQFKAGESCWLCGGKKDMLCGNCNGA
        A I  CSN KLNLI NG H YS  ARFPHL  KAAKNDRNTKPNS+ICGDCDGNGAV+CSQCKG GVN  D FNGQFKAGESCWLCGG+K+MLCGNCNGA
Subjt:  AAIGGCSNHKLNLIDNGLH-YSPAARFPHLNGKAAKNDRNTKPNSMICGDCDGNGAVLCSQCKGSGVNPADVFNGQFKAGESCWLCGGKKDMLCGNCNGA

Query:  GFIGGFLSTYDQ
        GFIGGFLSTYDQ
Subjt:  GFIGGFLSTYDQ

XP_008466412.1 PREDICTED: chaperone protein DnaJ-like [Cucumis melo]

7.4e-47

80.36

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Query:  AAIGGCSNHKLNLIDNGLH-YSPAARFPHLNGKAAKNDRNTKPNSMICGDCDGNGAVLCSQCKGSGVNPADVFNGQFKAGESCWLCGGKKDMLCGNCNGA
        +A+  CSN KLNLI NG H YS  ARFPHL  KAAKNDRNTKPNS+ICGDCDGNGAVLCSQCKG+GVN  D FNGQFKAG+SCWLCGG+ +MLCGNCNGA
Subjt:  AAIGGCSNHKLNLIDNGLH-YSPAARFPHLNGKAAKNDRNTKPNSMICGDCDGNGAVLCSQCKGSGVNPADVFNGQFKAGESCWLCGGKKDMLCGNCNGA

Query:  GFIGGFLSTYDQ
        GF+GGFLSTYDQ
Subjt:  GFIGGFLSTYDQ

XP_022148277.1 uncharacterized protein LOC111016947 [Momordica charantia]

5.3e-61

100

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Query:  AIGGCSNHKLNLIDNGLHYSPAARFPHLNGKAAKNDRNTKPNSMICGDCDGNGAVLCSQCKGSGVNPADVFNGQFKAGESCWLCGGKKDMLCGNCNGAGF
        AIGGCSNHKLNLIDNGLHYSPAARFPHLNGKAAKNDRNTKPNSMICGDCDGNGAVLCSQCKGSGVNPADVFNGQFKAGESCWLCGGKKDMLCGNCNGAGF
Subjt:  AIGGCSNHKLNLIDNGLHYSPAARFPHLNGKAAKNDRNTKPNSMICGDCDGNGAVLCSQCKGSGVNPADVFNGQFKAGESCWLCGGKKDMLCGNCNGAGF

Query:  IGGFLSTYDQ
        IGGFLSTYDQ
Subjt:  IGGFLSTYDQ

XP_038899028.1 protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic-like [Benincasa hispida]

5.2e-48

82.14

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Query:  AAIGGCSNHKLNLIDNGLH-YSPAARFPHLNGKAAKNDRNTKPNSMICGDCDGNGAVLCSQCKGSGVNPADVFNGQFKAGESCWLCGGKKDMLCGNCNGA
        +AI G SN KLNL++NG + YS  ARFPHLN KAAKNDRNTKPNS+ICGDCDGNGAVLCSQCKG+GVN  D FNGQFKAG SCWLCGG+K+MLCGNCNGA
Subjt:  AAIGGCSNHKLNLIDNGLH-YSPAARFPHLNGKAAKNDRNTKPNSMICGDCDGNGAVLCSQCKGSGVNPADVFNGQFKAGESCWLCGGKKDMLCGNCNGA

Query:  GFIGGFLSTYDQ
        GFIGGFLSTYDQ
Subjt:  GFIGGFLSTYDQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LDP8 Uncharacterized protein

3.3e-48

83.04

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Query:  AAIGGCSNHKLNLIDNGLH-YSPAARFPHLNGKAAKNDRNTKPNSMICGDCDGNGAVLCSQCKGSGVNPADVFNGQFKAGESCWLCGGKKDMLCGNCNGA
        A I  CSN KLNLI NG H YS  ARFPHL  KAAKNDRNTKPNS+ICGDCDGNGAV+CSQCKG GVN  D FNGQFKAGESCWLCGG+K+MLCGNCNGA
Subjt:  AAIGGCSNHKLNLIDNGLH-YSPAARFPHLNGKAAKNDRNTKPNSMICGDCDGNGAVLCSQCKGSGVNPADVFNGQFKAGESCWLCGGKKDMLCGNCNGA

Query:  GFIGGFLSTYDQ
        GFIGGFLSTYDQ
Subjt:  GFIGGFLSTYDQ

A0A1S3CSH4 chaperone protein DnaJ-like

3.6e-47

80.36

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Query:  AAIGGCSNHKLNLIDNGLH-YSPAARFPHLNGKAAKNDRNTKPNSMICGDCDGNGAVLCSQCKGSGVNPADVFNGQFKAGESCWLCGGKKDMLCGNCNGA
        +A+  CSN KLNLI NG H YS  ARFPHL  KAAKNDRNTKPNS+ICGDCDGNGAVLCSQCKG+GVN  D FNGQFKAG+SCWLCGG+ +MLCGNCNGA
Subjt:  AAIGGCSNHKLNLIDNGLH-YSPAARFPHLNGKAAKNDRNTKPNSMICGDCDGNGAVLCSQCKGSGVNPADVFNGQFKAGESCWLCGGKKDMLCGNCNGA

Query:  GFIGGFLSTYDQ
        GF+GGFLSTYDQ
Subjt:  GFIGGFLSTYDQ

A0A5A7TB44 Chaperone protein DnaJ-like

1.2e-47

81.25

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Query:  AAIGGCSNHKLNLIDNGLH-YSPAARFPHLNGKAAKNDRNTKPNSMICGDCDGNGAVLCSQCKGSGVNPADVFNGQFKAGESCWLCGGKKDMLCGNCNGA
        +AI  CSN KLNLI N  H YS  ARFPHL  KAAKNDRNTKPNS+ICGDCDGNGAVLCSQCKG+GVN  D FNGQFKAG+SCWLCGG+K+MLCGNCNGA
Subjt:  AAIGGCSNHKLNLIDNGLH-YSPAARFPHLNGKAAKNDRNTKPNSMICGDCDGNGAVLCSQCKGSGVNPADVFNGQFKAGESCWLCGGKKDMLCGNCNGA

Query:  GFIGGFLSTYDQ
        GF+GGFLSTYDQ
Subjt:  GFIGGFLSTYDQ

A0A5D3E725 Chaperone protein DnaJ-like

3.6e-47

80.36

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Query:  AAIGGCSNHKLNLIDNGLH-YSPAARFPHLNGKAAKNDRNTKPNSMICGDCDGNGAVLCSQCKGSGVNPADVFNGQFKAGESCWLCGGKKDMLCGNCNGA
        +A+  CSN KLNLI NG H YS  ARFPHL  KAAKNDRNTKPNS+ICGDCDGNGAVLCSQCKG+GVN  D FNGQFKAG+SCWLCGG+ +MLCGNCNGA
Subjt:  AAIGGCSNHKLNLIDNGLH-YSPAARFPHLNGKAAKNDRNTKPNSMICGDCDGNGAVLCSQCKGSGVNPADVFNGQFKAGESCWLCGGKKDMLCGNCNGA

Query:  GFIGGFLSTYDQ
        GF+GGFLSTYDQ
Subjt:  GFIGGFLSTYDQ

A0A6J1D4M9 uncharacterized protein LOC111016947

2.6e-61

100

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Query:  AIGGCSNHKLNLIDNGLHYSPAARFPHLNGKAAKNDRNTKPNSMICGDCDGNGAVLCSQCKGSGVNPADVFNGQFKAGESCWLCGGKKDMLCGNCNGAGF
        AIGGCSNHKLNLIDNGLHYSPAARFPHLNGKAAKNDRNTKPNSMICGDCDGNGAVLCSQCKGSGVNPADVFNGQFKAGESCWLCGGKKDMLCGNCNGAGF
Subjt:  AIGGCSNHKLNLIDNGLHYSPAARFPHLNGKAAKNDRNTKPNSMICGDCDGNGAVLCSQCKGSGVNPADVFNGQFKAGESCWLCGGKKDMLCGNCNGAGF

Query:  IGGFLSTYDQ
        IGGFLSTYDQ
Subjt:  IGGFLSTYDQ

SwissProt top hits

e value

%identity

Alignment

Q9SN73 Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic

4.3e-29

69.14

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Query:  KAAKND-RNTKPNSMICGDCDGNGAVLCSQCKGSGVNPADVFNGQFKAGESCWLCGGKKDMLCGNCNGAGFIGGFLSTYDQ
        KAA N+ + TKPNS++C +C+G G V CSQCKG GVN  D FNGQFKAG  CWLC GKK++LCG+CNGAGFIGGFLST+D+
Subjt:  KAAKND-RNTKPNSMICGDCDGNGAVLCSQCKGSGVNPADVFNGQFKAGESCWLCGGKKDMLCGNCNGAGFIGGFLSTYDQ

Q9XF14 Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic

8.9e-27

58.33

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Query:  KAAKNDRNTKPN----SMICGDCDGNGAVLCSQCKGSGVNPADVFNGQFKAGESCWLCGGKKDMLCGNCNGAGFIGGFLSTYDQ
        KA +ND++ K +    S++C DC+GNGA++C++C+G+GVN  D F G+FKAG  CWLC GK+++LCGNCNGAGF+GGFLST+D+
Subjt:  KAAKNDRNTKPN----SMICGDCDGNGAVLCSQCKGSGVNPADVFNGQFKAGESCWLCGGKKDMLCGNCNGAGFIGGFLSTYDQ

Arabidopsis top hits

e value

%identity

Alignment

AT3G47650.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein

3.0e-30

69.14

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Query:  KAAKND-RNTKPNSMICGDCDGNGAVLCSQCKGSGVNPADVFNGQFKAGESCWLCGGKKDMLCGNCNGAGFIGGFLSTYDQ
        KAA N+ + TKPNS++C +C+G G V CSQCKG GVN  D FNGQFKAG  CWLC GKK++LCG+CNGAGFIGGFLST+D+
Subjt:  KAAKND-RNTKPNSMICGDCDGNGAVLCSQCKGSGVNPADVFNGQFKAGESCWLCGGKKDMLCGNCNGAGFIGGFLSTYDQ

AT5G17840.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein

1.7e-04

34.48

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Query:  CGDCDGNGAVLCSQCKGSGVNPADVFNGQ-FKAGESCWLCGGKKDMLCGNCNGAGFIG
        C  C+  GA+LCS C G+G+    +   Q       C  CGG  +++C  C G G +G
Subjt:  CGDCDGNGAVLCSQCKGSGVNPADVFNGQ-FKAGESCWLCGGKKDMLCGNCNGAGFIG

Sequences

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CDS sequence

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GCAGCAATCGGAGGTTGTAGCAACCATAAGCTCAACCTGATTGACAACGGTCTCCACTATTCTCCAGCTGCTCGATTCCCTCACCTGAATGGCAAGGCTGCGAAGAATGA
TCGGAACACAAAACCTAATAGCATGATTTGTGGCGATTGTGATGGCAATGGTGCTGTTCTTTGCTCACAATGCAAAGGAAGTGGAGTAAATCCTGCCGACGTATTCAATG
GTCAGTTCAAAGCCGGCGAATCTTGCTGGCTATGCGGTGGGAAAAAGGATATGCTGTGCGGGAATTGCAATGGAGCTGGCTTCATTGGAGGTTTCCTCAGCACTTATGAT
CAA

mRNA sequence

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Protein sequence

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AAIGGCSNHKLNLIDNGLHYSPAARFPHLNGKAAKNDRNTKPNSMICGDCDGNGAVLCSQCKGSGVNPADVFNGQFKAGESCWLCGGKKDMLCGNCNGAGFIGGFLSTYD
Q

MS008497 (gene) of Bitter gourd (TR) v1 genome