; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS008501 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008501
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionEthylene-responsive transcription factor SHINE
Genome locationscaffold4:1842181..1843327
RNA-Seq ExpressionMS008501
SyntenyMS008501
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022134182.1 ethylene-responsive transcription factor SHINE 2-like [Momordica charantia]1.7e-9998.92Show/hide
Query:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRQGDGSSPLSPKALSELLSTKLRKCCKN
        MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGR GDGSSPLSPKALSELLSTKLRKCCKN
Subjt:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRQGDGSSPLSPKALSELLSTKLRKCCKN

Query:  PSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETEMETPSPSPSLESASGEADGHRNGIDEEDRIAMQMIEELLNWN
        PSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETE ETPSPSPSLESASGEADGHRNGIDEEDRIAMQMIEELLNWN
Subjt:  PSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETEMETPSPSPSLESASGEADGHRNGIDEEDRIAMQMIEELLNWN

XP_038899928.1 ethylene-responsive transcription factor SHINE 2-like isoform X1 [Benincasa hispida]8.5e-8889.89Show/hide
Query:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRQGDGSSPLSPKALSELLSTKLRKCCKN
        MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASK+Q+EE   G GSSP+SPKALSELLSTKLRKCCKN
Subjt:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRQGDGSSPLSPKALSELLSTKLRKCCKN

Query:  PSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETEMETPSPSPSLESASGEA--DGHRNGIDEEDRIAMQMIEELLNWN
        PSPSLTCLRLDSDNAHIGVWQKRAGTRA SNWVMRIELGKK    + PSPSPS ES S EA  DGHRNGIDEEDRIAMQMIEELLNWN
Subjt:  PSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETEMETPSPSPSLESASGEA--DGHRNGIDEEDRIAMQMIEELLNWN

XP_038899930.1 ethylene-responsive transcription factor SHINE 2-like isoform X2 [Benincasa hispida]8.5e-8889.89Show/hide
Query:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRQGDGSSPLSPKALSELLSTKLRKCCKN
        MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASK+Q+EE   G GSSP+SPKALSELLSTKLRKCCKN
Subjt:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRQGDGSSPLSPKALSELLSTKLRKCCKN

Query:  PSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETEMETPSPSPSLESASGEA--DGHRNGIDEEDRIAMQMIEELLNWN
        PSPSLTCLRLDSDNAHIGVWQKRAGTRA SNWVMRIELGKK    + PSPSPS ES S EA  DGHRNGIDEEDRIAMQMIEELLNWN
Subjt:  PSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETEMETPSPSPSLESASGEA--DGHRNGIDEEDRIAMQMIEELLNWN

XP_038899931.1 ethylene-responsive transcription factor SHINE 2-like isoform X3 [Benincasa hispida]8.5e-8889.89Show/hide
Query:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRQGDGSSPLSPKALSELLSTKLRKCCKN
        MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASK+Q+EE   G GSSP+SPKALSELLSTKLRKCCKN
Subjt:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRQGDGSSPLSPKALSELLSTKLRKCCKN

Query:  PSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETEMETPSPSPSLESASGEA--DGHRNGIDEEDRIAMQMIEELLNWN
        PSPSLTCLRLDSDNAHIGVWQKRAGTRA SNWVMRIELGKK    + PSPSPS ES S EA  DGHRNGIDEEDRIAMQMIEELLNWN
Subjt:  PSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETEMETPSPSPSLESASGEA--DGHRNGIDEEDRIAMQMIEELLNWN

XP_038899932.1 ethylene-responsive transcription factor SHINE 2-like isoform X4 [Benincasa hispida]8.5e-8889.89Show/hide
Query:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRQGDGSSPLSPKALSELLSTKLRKCCKN
        MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASK+Q+EE   G GSSP+SPKALSELLSTKLRKCCKN
Subjt:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRQGDGSSPLSPKALSELLSTKLRKCCKN

Query:  PSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETEMETPSPSPSLESASGEA--DGHRNGIDEEDRIAMQMIEELLNWN
        PSPSLTCLRLDSDNAHIGVWQKRAGTRA SNWVMRIELGKK    + PSPSPS ES S EA  DGHRNGIDEEDRIAMQMIEELLNWN
Subjt:  PSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETEMETPSPSPSLESASGEA--DGHRNGIDEEDRIAMQMIEELLNWN

TrEMBL top hitse value%identityAlignment
A0A6J1BYX9 ethylene-responsive transcription factor SHINE 2-like8.0e-10098.92Show/hide
Query:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRQGDGSSPLSPKALSELLSTKLRKCCKN
        MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGR GDGSSPLSPKALSELLSTKLRKCCKN
Subjt:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRQGDGSSPLSPKALSELLSTKLRKCCKN

Query:  PSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETEMETPSPSPSLESASGEADGHRNGIDEEDRIAMQMIEELLNWN
        PSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETE ETPSPSPSLESASGEADGHRNGIDEEDRIAMQMIEELLNWN
Subjt:  PSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETEMETPSPSPSLESASGEADGHRNGIDEEDRIAMQMIEELLNWN

A0A6J1F8L5 ethylene-responsive transcription factor SHINE 2 isoform X11.6e-8789.25Show/hide
Query:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRQGDGSSPLSPKALSELLSTKLRKCCKN
        MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASK+Q+ E   G GSSP++PKALSELLSTKLRKCCKN
Subjt:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRQGDGSSPLSPKALSELLSTKLRKCCKN

Query:  PSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETEMETPSPSPSLESASGEADGHRNGIDEEDRIAMQMIEELLNWN
        PSPSLTCLRLDSDNAHIGVWQKRAGTRA SNWVMRIELGKK    E PSP PS ES S E DGHRNGIDEEDRIAMQMIEELLNWN
Subjt:  PSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETEMETPSPSPSLESASGEADGHRNGIDEEDRIAMQMIEELLNWN

A0A6J1FE03 ethylene-responsive transcription factor SHINE 2 isoform X21.6e-8789.25Show/hide
Query:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRQGDGSSPLSPKALSELLSTKLRKCCKN
        MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASK+Q+ E   G GSSP++PKALSELLSTKLRKCCKN
Subjt:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRQGDGSSPLSPKALSELLSTKLRKCCKN

Query:  PSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETEMETPSPSPSLESASGEADGHRNGIDEEDRIAMQMIEELLNWN
        PSPSLTCLRLDSDNAHIGVWQKRAGTRA SNWVMRIELGKK    E PSP PS ES S E DGHRNGIDEEDRIAMQMIEELLNWN
Subjt:  PSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETEMETPSPSPSLESASGEADGHRNGIDEEDRIAMQMIEELLNWN

A0A6J1IGA2 ethylene-responsive transcription factor SHINE 2 isoform X11.3e-8688.83Show/hide
Query:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGR--QGDGSSPLSPKALSELLSTKLRKCC
        MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASK+Q+ E     G GSSP++PKALSELLSTKLRKCC
Subjt:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGR--QGDGSSPLSPKALSELLSTKLRKCC

Query:  KNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETEMETPSPSPSLESASGEADGHRNGIDEEDRIAMQMIEELLNWN
        KNPSPSLTCLRLDSDNAHIGVWQKRAGTRA SNWVMRIELGKK    E PSP PS ES S EADGHRNGIDEEDRIAMQMIEELLNWN
Subjt:  KNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETEMETPSPSPSLESASGEADGHRNGIDEEDRIAMQMIEELLNWN

A0A6J1IIU8 ethylene-responsive transcription factor SHINE 2 isoform X21.3e-8688.83Show/hide
Query:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGR--QGDGSSPLSPKALSELLSTKLRKCC
        MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASK+Q+ E     G GSSP++PKALSELLSTKLRKCC
Subjt:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGR--QGDGSSPLSPKALSELLSTKLRKCC

Query:  KNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETEMETPSPSPSLESASGEADGHRNGIDEEDRIAMQMIEELLNWN
        KNPSPSLTCLRLDSDNAHIGVWQKRAGTRA SNWVMRIELGKK    E PSP PS ES S EADGHRNGIDEEDRIAMQMIEELLNWN
Subjt:  KNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETEMETPSPSPSLESASGEADGHRNGIDEEDRIAMQMIEELLNWN

SwissProt top hitse value%identityAlignment
P16146 Protein PPLZ024.6e-2053.76Show/hide
Query:  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRQGDGSSPLSPKALSELLSTKLRKC
        +++RG RQR WGSWVSEIRH +LK R+W GTF++AEDAARAYD+AA LM G  A+TNFP + N ++           S K LS  L  KL +C
Subjt:  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRQGDGSSPLSPKALSELLSTKLRKC

Q3E958 Ethylene-responsive transcription factor SHINE 31.2e-5761.62Show/hide
Query:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRQGDGSSPLSPKALSELLSTKLRKCCKN
        MV+S+KFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAE AARAYDQAA+LMNGQ+AKTNFP  K+      +   S+  SPK+LSELL+ KLRK CK+
Subjt:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRQGDGSSPLSPKALSELLSTKLRKCCKN

Query:  PSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETEMETPSPSPSLESASGEADGHRNGIDEEDRIAMQMIEELLNW
         +P LTCLRLD+D++HIGVWQKRAG++ + NWV  +ELG K       +  P  +  + +       + E+D++AMQMIEELLNW
Subjt:  PSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETEMETPSPSPSLESASGEADGHRNGIDEEDRIAMQMIEELLNW

Q94AW5 Ethylene-responsive transcription factor ERF0031.2e-2341.99Show/hide
Query:  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRQGDGSSPLSPKALSELLSTKLRKCCKNPSPS
        ++FRGVRQR WGSWVSEIRHPLLK R+WLGTF+TAEDAARAYD+AA LM G  A+TNFP + N              S K LS  L+ KL KC       
Subjt:  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRQGDGSSPLSPKALSELLSTKLRKCCKNPSPS

Query:  LTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETEMETPSPSPSLESASGEADGHRNGIDEEDRIAMQMIEELLNW
        +  L++          Q      A S+ V   E        ET      ++   G A+  +N    E+    QMIEELL++
Subjt:  LTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETEMETPSPSPSLESASGEADGHRNGIDEEDRIAMQMIEELLNW

Q9LFN7 Ethylene-responsive transcription factor SHINE 22.4e-6163.49Show/hide
Query:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRQGDGSSPL-SPKALSELLSTKLRKCCK
        MV+SRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTF+TAE AARAYDQAA+LMNGQNAKTNFP  K++       D +SPL SPK+LSELL+ KLRK CK
Subjt:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRQGDGSSPL-SPKALSELLSTKLRKCCK

Query:  NPSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGK--KETEMETPSPSPSLESASGEADGHRNGIDEEDRIAMQMIEELLNWN
        + +PSLTCLRLD+D++HIGVWQKRAG++ +  WVMR+ELG    E+ ++    + + ++   E +     I +ED++AM+MIEELLNW+
Subjt:  NPSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGK--KETEMETPSPSPSLESASGEADGHRNGIDEEDRIAMQMIEELLNWN

Q9XI33 Ethylene-responsive transcription factor WIN11.2e-5757.79Show/hide
Query:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRQGDG--------SSPLSPKALSELLST
        MV ++KFRGVRQR WGSWV+EIRHPLLKRR+WLGTF+TAE+AARAYD+AA+LM+G+NAKTNFP + N   E  +G          SS  S  +LS +LS 
Subjt:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRQGDG--------SSPLSPKALSELLST

Query:  KLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETEMETPSPSPS----LESASGEADGHRNGI-DEEDRIAMQMIEELLNWN
        KLRKCCK+PSPSLTCLRLD+ ++HIGVWQKRAG+++ S+WVM +ELG   +  ET S +        +   E  G R  + DEE+++A+QMIEELLN N
Subjt:  KLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETEMETPSPSPS----LESASGEADGHRNGI-DEEDRIAMQMIEELLNWN

Arabidopsis top hitse value%identityAlignment
AT1G15360.1 Integrase-type DNA-binding superfamily protein8.9e-5957.79Show/hide
Query:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRQGDG--------SSPLSPKALSELLST
        MV ++KFRGVRQR WGSWV+EIRHPLLKRR+WLGTF+TAE+AARAYD+AA+LM+G+NAKTNFP + N   E  +G          SS  S  +LS +LS 
Subjt:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRQGDG--------SSPLSPKALSELLST

Query:  KLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETEMETPSPSPS----LESASGEADGHRNGI-DEEDRIAMQMIEELLNWN
        KLRKCCK+PSPSLTCLRLD+ ++HIGVWQKRAG+++ S+WVM +ELG   +  ET S +        +   E  G R  + DEE+++A+QMIEELLN N
Subjt:  KLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETEMETPSPSPS----LESASGEADGHRNGI-DEEDRIAMQMIEELLNWN

AT5G11190.1 Integrase-type DNA-binding superfamily protein1.7e-6263.49Show/hide
Query:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRQGDGSSPL-SPKALSELLSTKLRKCCK
        MV+SRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTF+TAE AARAYDQAA+LMNGQNAKTNFP  K++       D +SPL SPK+LSELL+ KLRK CK
Subjt:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRQGDGSSPL-SPKALSELLSTKLRKCCK

Query:  NPSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGK--KETEMETPSPSPSLESASGEADGHRNGIDEEDRIAMQMIEELLNWN
        + +PSLTCLRLD+D++HIGVWQKRAG++ +  WVMR+ELG    E+ ++    + + ++   E +     I +ED++AM+MIEELLNW+
Subjt:  NPSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGK--KETEMETPSPSPSLESASGEADGHRNGIDEEDRIAMQMIEELLNWN

AT5G25190.1 Integrase-type DNA-binding superfamily protein8.4e-2541.99Show/hide
Query:  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRQGDGSSPLSPKALSELLSTKLRKCCKNPSPS
        ++FRGVRQR WGSWVSEIRHPLLK R+WLGTF+TAEDAARAYD+AA LM G  A+TNFP + N              S K LS  L+ KL KC       
Subjt:  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRQGDGSSPLSPKALSELLSTKLRKCCKNPSPS

Query:  LTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETEMETPSPSPSLESASGEADGHRNGIDEEDRIAMQMIEELLNW
        +  L++          Q      A S+ V   E        ET      ++   G A+  +N    E+    QMIEELL++
Subjt:  LTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETEMETPSPSPSLESASGEADGHRNGIDEEDRIAMQMIEELLNW

AT5G25390.1 Integrase-type DNA-binding superfamily protein2.0e-5560Show/hide
Query:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRQGDGSSPLSPKALSELLSTKLRKCCKN
        MV+S+KFRGVRQRQWGSWVSEIRHPLL   VWLGTFDTAE AARAYDQAA+LMNGQ+AKTNFP  K+      +   S+  SPK+LSELL+ KLRK CK+
Subjt:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRQGDGSSPLSPKALSELLSTKLRKCCKN

Query:  PSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETEMETPSPSPSLESASGEADGHRNGIDEEDRIAMQMIEELLNW
         +P LTCLRLD+D++HIGVWQKRAG++ + NWV  +ELG K       +  P  +  + +       + E+D++AMQMIEELLNW
Subjt:  PSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETEMETPSPSPSLESASGEADGHRNGIDEEDRIAMQMIEELLNW

AT5G25390.2 Integrase-type DNA-binding superfamily protein8.9e-5961.62Show/hide
Query:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRQGDGSSPLSPKALSELLSTKLRKCCKN
        MV+S+KFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAE AARAYDQAA+LMNGQ+AKTNFP  K+      +   S+  SPK+LSELL+ KLRK CK+
Subjt:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRQGDGSSPLSPKALSELLSTKLRKCCKN

Query:  PSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETEMETPSPSPSLESASGEADGHRNGIDEEDRIAMQMIEELLNW
         +P LTCLRLD+D++HIGVWQKRAG++ + NWV  +ELG K       +  P  +  + +       + E+D++AMQMIEELLNW
Subjt:  PSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETEMETPSPSPSLESASGEADGHRNGIDEEDRIAMQMIEELLNW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTATTCGAGGAAGTTCAGAGGAGTCAGGCAGCGGCAGTGGGGCTCTTGGGTGTCAGAAATCCGCCACCCATTACTGAAGAGAAGGGTGTGGCTGGGGACATTTGA
CACGGCCGAGGATGCAGCACGAGCGTATGATCAAGCAGCCATCTTGATGAACGGCCAAAACGCCAAGACCAATTTCCCTGCATCGAAGAACCAAGCTGAAGAAGGCAGGC
AAGGGGATGGATCTTCTCCATTGTCCCCAAAAGCACTTTCAGAGCTACTCAGTACAAAGCTCAGAAAGTGCTGCAAGAACCCATCTCCCTCCCTGACATGCCTGCGGCTC
GACAGCGACAACGCCCACATCGGTGTCTGGCAGAAGCGCGCTGGCACTCGCGCTGCCTCCAATTGGGTCATGAGGATCGAGCTAGGAAAGAAGGAGACAGAGATGGAGAC
GCCATCCCCGTCGCCGTCATTGGAATCGGCAAGCGGGGAAGCAGATGGCCACCGGAATGGAATTGATGAAGAAGACAGAATTGCAATGCAAATGATTGAAGAATTGCTCA
ACTGGAAC
mRNA sequenceShow/hide mRNA sequence
ATGGTTTATTCGAGGAAGTTCAGAGGAGTCAGGCAGCGGCAGTGGGGCTCTTGGGTGTCAGAAATCCGCCACCCATTACTGAAGAGAAGGGTGTGGCTGGGGACATTTGA
CACGGCCGAGGATGCAGCACGAGCGTATGATCAAGCAGCCATCTTGATGAACGGCCAAAACGCCAAGACCAATTTCCCTGCATCGAAGAACCAAGCTGAAGAAGGCAGGC
AAGGGGATGGATCTTCTCCATTGTCCCCAAAAGCACTTTCAGAGCTACTCAGTACAAAGCTCAGAAAGTGCTGCAAGAACCCATCTCCCTCCCTGACATGCCTGCGGCTC
GACAGCGACAACGCCCACATCGGTGTCTGGCAGAAGCGCGCTGGCACTCGCGCTGCCTCCAATTGGGTCATGAGGATCGAGCTAGGAAAGAAGGAGACAGAGATGGAGAC
GCCATCCCCGTCGCCGTCATTGGAATCGGCAAGCGGGGAAGCAGATGGCCACCGGAATGGAATTGATGAAGAAGACAGAATTGCAATGCAAATGATTGAAGAATTGCTCA
ACTGGAAC
Protein sequenceShow/hide protein sequence
MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRQGDGSSPLSPKALSELLSTKLRKCCKNPSPSLTCLRL
DSDNAHIGVWQKRAGTRAASNWVMRIELGKKETEMETPSPSPSLESASGEADGHRNGIDEEDRIAMQMIEELLNWN