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MS008509 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008509
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAuxin-responsive protein
Genome locationscaffold4:1893766..1894021
RNA-Seq ExpressionMS008509
SyntenyMS008509
Gene Ontology termsGO:0050794 - regulation of cellular process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7031798.1 Auxin-responsive protein IAA29 [Cucurbita argyrosperma subsp. argyrosperma]3.4e-0758.18Show/hide
Query:  RAHAMQVSTLTRPIQPLRCFQWPLGARRSSLLALI-EVTWTSIGAARSALDKFSP
        +  +M+ ST TRPIQ LRC QWPL A  +S LA++ +VTWTSIG AR  LD F P
Subjt:  RAHAMQVSTLTRPIQPLRCFQWPLGARRSSLLALI-EVTWTSIGAARSALDKFSP
XP_022940237.1 auxin-responsive protein IAA29-like isoform X2 [Cucurbita moschata]1.3e-0660.78Show/hide
Query:  MQVSTLTRPIQPLRCFQWPLGARRSSLLALI-EVTWTSIGAARSALDKFSP
        M+ ST TRPIQ LRC QWPL A  +S +A++ +VTWTSIG AR  LD F P
Subjt:  MQVSTLTRPIQPLRCFQWPLGARRSSLLALI-EVTWTSIGAARSALDKFSP
XP_022982033.1 auxin-responsive protein IAA29-like isoform X3 [Cucurbita maxima]5.8e-0762.75Show/hide
Query:  MQVSTLTRPIQPLRCFQWPLGARRSSLLALI-EVTWTSIGAARSALDKFSP
        M+ ST TRPIQ LRC QWPL A  +S LA++ +VTWTSIG AR  LD F P
Subjt:  MQVSTLTRPIQPLRCFQWPLGARRSSLLALI-EVTWTSIGAARSALDKFSP
XP_023524314.1 auxin-responsive protein IAA29-like isoform X2 [Cucurbita pepo subsp. pepo]5.8e-0762.75Show/hide
Query:  MQVSTLTRPIQPLRCFQWPLGARRSSLLALI-EVTWTSIGAARSALDKFSP
        M+ ST TRPIQ LRC QWPL A  +S LA++ +VTWTSIG AR  LD F P
Subjt:  MQVSTLTRPIQPLRCFQWPLGARRSSLLALI-EVTWTSIGAARSALDKFSP
TrEMBL top hitse value%identityAlignment
A0A6J1FJ11 Auxin-responsive protein6.2e-0760.78Show/hide
Query:  MQVSTLTRPIQPLRCFQWPLGARRSSLLALI-EVTWTSIGAARSALDKFSP
        M+ ST TRPIQ LRC QWPL A  +S +A++ +VTWTSIG AR  LD F P
Subjt:  MQVSTLTRPIQPLRCFQWPLGARRSSLLALI-EVTWTSIGAARSALDKFSP
A0A6J1J3R3 Auxin-responsive protein2.8e-0762.75Show/hide
Query:  MQVSTLTRPIQPLRCFQWPLGARRSSLLALI-EVTWTSIGAARSALDKFSP
        M+ ST TRPIQ LRC QWPL A  +S LA++ +VTWTSIG AR  LD F P
Subjt:  MQVSTLTRPIQPLRCFQWPLGARRSSLLALI-EVTWTSIGAARSALDKFSP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAAAATCAATGGCGGATTGTGATTGAGCTGTATAATATGCTTCCCCTGCGAATGCCAGCTTTTCGTGTCAGTAAAACACTTTTGGGGTCTATTAGGGCTCATGCAATGCA
GGTTTCGACATTGACACGACCAATCCAACCGCTTCGGTGCTTCCAATGGCCGCTCGGTGCCAGACGGAGCAGTCTCCTTGCCCTAATTGAGGTCACGTGGACTTCAATTG
GAGCTGCCCGCTCGGCTCTAGACAAGTTCTCGCCC
mRNA sequenceShow/hide mRNA sequence
CAAAATCAATGGCGGATTGTGATTGAGCTGTATAATATGCTTCCCCTGCGAATGCCAGCTTTTCGTGTCAGTAAAACACTTTTGGGGTCTATTAGGGCTCATGCAATGCA
GGTTTCGACATTGACACGACCAATCCAACCGCTTCGGTGCTTCCAATGGCCGCTCGGTGCCAGACGGAGCAGTCTCCTTGCCCTAATTGAGGTCACGTGGACTTCAATTG
GAGCTGCCCGCTCGGCTCTAGACAAGTTCTCGCCC
Protein sequenceShow/hide protein sequence
QNQWRIVIELYNMLPLRMPAFRVSKTLLGSIRAHAMQVSTLTRPIQPLRCFQWPLGARRSSLLALIEVTWTSIGAARSALDKFSP