; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS008511 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008511
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUbiquitin-like domain-containing protein
Genome locationscaffold4:1903285..1905742
RNA-Seq ExpressionMS008511
SyntenyMS008511
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0005689 - U12-type spliceosomal complex (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR029071 - Ubiquitin-like domain superfamily
IPR039690 - U11/U12 small nuclear ribonucleoprotein 25kDa protein
IPR040610 - SNRNP25, ubiquitin-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038816.1 U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like [Cucumis melo var. makuwa]9.2e-11578.49Show/hide
Query:  MAVDGVCRLDIGDFPAPPRALSSLDKRRRSFSLLISSPLMIVGLSRKNVSYRQLPHQPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGP
        MAVDGVC LD+ DFP PP + ++ +K RRSFSLL SSPLMIVGLSRKNV YRQLPHQPL LSVLKLDGSCFDIQV++SATVAELKGAVE VFSHMPQ+GP
Subjt:  MAVDGVCRLDIGDFPAPPRALSSLDKRRRSFSLLISSPLMIVGLSRKNVSYRQLPHQPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGP

Query:  GKISWLHVWWHFCLCYAGEKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKEYVVSSKLHSRTSSRSKSHKQNNQDN-------YNDIEMGRFQ
        GKISWLHVWWHFCLCY G+KL+DD DYIA+FGIKDGDQLQFVRHVTTGYNVIRKQSK+  VSSKL SR SSRSKS KQN+Q +       YNDIE GR Q
Subjt:  GKISWLHVWWHFCLCYAGEKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKEYVVSSKLHSRTSSRSKSHKQNNQDN-------YNDIEMGRFQ

Query:  HHNNGELFMSPEPKMVVFLGGWFSHTKLASAGRMSINSLVRPSGSRPSLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV
        H+ N +LF++ +PKMVVFLGGWFSHTKLASAG+MSI SLVRPS +RPSLV G KNL+QLCREKRHY+KV+KKKRSII V
Subjt:  HHNNGELFMSPEPKMVVFLGGWFSHTKLASAGRMSINSLVRPSGSRPSLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV

XP_004136480.1 uncharacterized protein LOC101219460 [Cucumis sativus]4.4e-11781Show/hide
Query:  MAVDGVCRLDIGDFPAPPRALSSLDKRRRSFSLLISSPLMIVGLSRKNVSYRQLPHQPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGP
        MAVDGVC LD+ DFP P ++ ++ +K RRSFSLL SSPLMIVGLSRKNV YRQLPHQPL LSVLKLDGS FDIQV++SATVAELKGAVE VFSHMPQ GP
Subjt:  MAVDGVCRLDIGDFPAPPRALSSLDKRRRSFSLLISSPLMIVGLSRKNVSYRQLPHQPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGP

Query:  GKISWLHVWWHFCLCYAGEKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKEYVVSSKLHSRTSSRSKSHKQNNQD-----NYNDIEMGRFQH-
        GKISWLHVWWHFCLCYAG+KLVDD DYIA+FGIKDGDQLQFVRHVTTGYNVIRKQSK+ VVSSKL SR SSRSKS KQN+Q      NYNDIE GR QH 
Subjt:  GKISWLHVWWHFCLCYAGEKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKEYVVSSKLHSRTSSRSKSHKQNNQD-----NYNDIEMGRFQH-

Query:  -HNNGELFMSPEPKMVVFLGGWFSHTKLASAGRMSINSLVRPSGSRPSLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV
          NN +LFM+ EPKMVVFLGGWFSHTKLASAG+MSI SLVRPS +RPSLVRGFKNL+QLCREKRHY+KV+KKKRSII V
Subjt:  -HNNGELFMSPEPKMVVFLGGWFSHTKLASAGRMSINSLVRPSGSRPSLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV

XP_008466420.1 PREDICTED: uncharacterized protein LOC103503833 [Cucumis melo]1.2e-11478.49Show/hide
Query:  MAVDGVCRLDIGDFPAPPRALSSLDKRRRSFSLLISSPLMIVGLSRKNVSYRQLPHQPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGP
        MAVDGVC LD+ DFP PP + ++ +K RRSFSLL SSPLMIVGLSRKNV YRQLPHQPL LSVLKLDGSCFDIQV++SATVAELKGAVE VFSHMPQ+GP
Subjt:  MAVDGVCRLDIGDFPAPPRALSSLDKRRRSFSLLISSPLMIVGLSRKNVSYRQLPHQPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGP

Query:  GKISWLHVWWHFCLCYAGEKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKEYVVSSKLHSRTSSRSKSHKQNNQDN-------YNDIEMGRFQ
        GKISWLHVWWHFCLCY G+KL+DD DYIA+FGIKDGDQLQFVRHVTTGYNVIRKQSK+  VSSKL SR SSRSKS KQN+Q +       YNDIE GR Q
Subjt:  GKISWLHVWWHFCLCYAGEKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKEYVVSSKLHSRTSSRSKSHKQNNQDN-------YNDIEMGRFQ

Query:  HHNNGELFMSPEPKMVVFLGGWFSHTKLASAGRMSINSLVRPSGSRPSLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV
        H+ N +LF++ +PKMVVFLGGWFSHTKLASAG+MSI SLVRPS +RPSLV G KNL+QLCREKRHY+KV+KKKRSII V
Subjt:  HHNNGELFMSPEPKMVVFLGGWFSHTKLASAGRMSINSLVRPSGSRPSLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV

XP_022134606.1 uncharacterized protein LOC111006831 [Momordica charantia]3.9e-15098.53Show/hide
Query:  MAVDGVCRLDIGDFPAPPRALSSLDKRRRSFSLLISSPLMIVGLSRKNVSYRQLPHQPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGP
        MAVDGVCRLDIGDFPAPPRALSSL KRRRSFSLLISSPLMIVGLSRKNVSYRQLPHQPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGP
Subjt:  MAVDGVCRLDIGDFPAPPRALSSLDKRRRSFSLLISSPLMIVGLSRKNVSYRQLPHQPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGP

Query:  GKISWLHVWWHFCLCYAGEKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKEYVVSSKLHSRTSSRSKSHKQNNQDNYNDIEMGRFQHHNNGEL
        GKISWLHVWWHFCLCYAGEKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQS EYVVSSKLHSRTSSRSKSHK+N+QDNYNDIEMGRFQHHNNGEL
Subjt:  GKISWLHVWWHFCLCYAGEKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKEYVVSSKLHSRTSSRSKSHKQNNQDNYNDIEMGRFQHHNNGEL

Query:  FMSPEPKMVVFLGGWFSHTKLASAGRMSINSLVRPSGSRPSLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV
        FMSPEPKMVVFLGGWFSHTKLASAGRMSINSLVRPSGSRPSLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV
Subjt:  FMSPEPKMVVFLGGWFSHTKLASAGRMSINSLVRPSGSRPSLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV

XP_038899214.1 uncharacterized protein LOC120086568 [Benincasa hispida]5.9e-12281.29Show/hide
Query:  MAVDGVCRLDIGDF-PAPPRALSSLDKRRRSFSLLISSPLMIVGLSRKNVSYRQLPHQPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDG
        MA+DGVC LD+ +F P PP   ++++K RRSFSLL SSPLMIVGLSRKNV YRQLPHQPL LSVLKLDGSCFDIQVK+SATVAELKGAVE+VFSHMPQ+G
Subjt:  MAVDGVCRLDIGDF-PAPPRALSSLDKRRRSFSLLISSPLMIVGLSRKNVSYRQLPHQPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDG

Query:  PGKISWLHVWWHFCLCYAGEKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKEYVVSSKLHSRTSSRSKSHKQNNQD-----NYNDIEMGRFQH
        PGKISWLHVWWHFCLCYAG+KLVDD DYIANFGIKDGDQLQFVRHVTTGYN IRKQSK+ VVSSKL SR S RSK+++QN+Q+     NYNDIE GRFQH
Subjt:  PGKISWLHVWWHFCLCYAGEKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKEYVVSSKLHSRTSSRSKSHKQNNQD-----NYNDIEMGRFQH

Query:  HNNGELFMSPEPKMVVFLGGWFSHTKLASAGRMSINSLVRPSGSRPSLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV
        H N ELFM+ EPKMVVFLGGWFSHTKLASAG+  INSLVRPSG+RPSLVRGFKNL+QLCREKRHY+KV+KKKRSII V
Subjt:  HNNGELFMSPEPKMVVFLGGWFSHTKLASAGRMSINSLVRPSGSRPSLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV

TrEMBL top hitse value%identityAlignment
A0A0A0LH97 Ubiquitin-like domain-containing protein2.1e-11781Show/hide
Query:  MAVDGVCRLDIGDFPAPPRALSSLDKRRRSFSLLISSPLMIVGLSRKNVSYRQLPHQPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGP
        MAVDGVC LD+ DFP P ++ ++ +K RRSFSLL SSPLMIVGLSRKNV YRQLPHQPL LSVLKLDGS FDIQV++SATVAELKGAVE VFSHMPQ GP
Subjt:  MAVDGVCRLDIGDFPAPPRALSSLDKRRRSFSLLISSPLMIVGLSRKNVSYRQLPHQPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGP

Query:  GKISWLHVWWHFCLCYAGEKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKEYVVSSKLHSRTSSRSKSHKQNNQD-----NYNDIEMGRFQH-
        GKISWLHVWWHFCLCYAG+KLVDD DYIA+FGIKDGDQLQFVRHVTTGYNVIRKQSK+ VVSSKL SR SSRSKS KQN+Q      NYNDIE GR QH 
Subjt:  GKISWLHVWWHFCLCYAGEKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKEYVVSSKLHSRTSSRSKSHKQNNQD-----NYNDIEMGRFQH-

Query:  -HNNGELFMSPEPKMVVFLGGWFSHTKLASAGRMSINSLVRPSGSRPSLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV
          NN +LFM+ EPKMVVFLGGWFSHTKLASAG+MSI SLVRPS +RPSLVRGFKNL+QLCREKRHY+KV+KKKRSII V
Subjt:  -HNNGELFMSPEPKMVVFLGGWFSHTKLASAGRMSINSLVRPSGSRPSLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV

A0A1S3CR65 uncharacterized protein LOC1035038335.8e-11578.49Show/hide
Query:  MAVDGVCRLDIGDFPAPPRALSSLDKRRRSFSLLISSPLMIVGLSRKNVSYRQLPHQPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGP
        MAVDGVC LD+ DFP PP + ++ +K RRSFSLL SSPLMIVGLSRKNV YRQLPHQPL LSVLKLDGSCFDIQV++SATVAELKGAVE VFSHMPQ+GP
Subjt:  MAVDGVCRLDIGDFPAPPRALSSLDKRRRSFSLLISSPLMIVGLSRKNVSYRQLPHQPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGP

Query:  GKISWLHVWWHFCLCYAGEKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKEYVVSSKLHSRTSSRSKSHKQNNQDN-------YNDIEMGRFQ
        GKISWLHVWWHFCLCY G+KL+DD DYIA+FGIKDGDQLQFVRHVTTGYNVIRKQSK+  VSSKL SR SSRSKS KQN+Q +       YNDIE GR Q
Subjt:  GKISWLHVWWHFCLCYAGEKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKEYVVSSKLHSRTSSRSKSHKQNNQDN-------YNDIEMGRFQ

Query:  HHNNGELFMSPEPKMVVFLGGWFSHTKLASAGRMSINSLVRPSGSRPSLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV
        H+ N +LF++ +PKMVVFLGGWFSHTKLASAG+MSI SLVRPS +RPSLV G KNL+QLCREKRHY+KV+KKKRSII V
Subjt:  HHNNGELFMSPEPKMVVFLGGWFSHTKLASAGRMSINSLVRPSGSRPSLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV

A0A5A7T9I3 U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like4.4e-11578.49Show/hide
Query:  MAVDGVCRLDIGDFPAPPRALSSLDKRRRSFSLLISSPLMIVGLSRKNVSYRQLPHQPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGP
        MAVDGVC LD+ DFP PP + ++ +K RRSFSLL SSPLMIVGLSRKNV YRQLPHQPL LSVLKLDGSCFDIQV++SATVAELKGAVE VFSHMPQ+GP
Subjt:  MAVDGVCRLDIGDFPAPPRALSSLDKRRRSFSLLISSPLMIVGLSRKNVSYRQLPHQPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGP

Query:  GKISWLHVWWHFCLCYAGEKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKEYVVSSKLHSRTSSRSKSHKQNNQDN-------YNDIEMGRFQ
        GKISWLHVWWHFCLCY G+KL+DD DYIA+FGIKDGDQLQFVRHVTTGYNVIRKQSK+  VSSKL SR SSRSKS KQN+Q +       YNDIE GR Q
Subjt:  GKISWLHVWWHFCLCYAGEKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKEYVVSSKLHSRTSSRSKSHKQNNQDN-------YNDIEMGRFQ

Query:  HHNNGELFMSPEPKMVVFLGGWFSHTKLASAGRMSINSLVRPSGSRPSLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV
        H+ N +LF++ +PKMVVFLGGWFSHTKLASAG+MSI SLVRPS +RPSLV G KNL+QLCREKRHY+KV+KKKRSII V
Subjt:  HHNNGELFMSPEPKMVVFLGGWFSHTKLASAGRMSINSLVRPSGSRPSLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV

A0A5D3E6G8 U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like5.8e-11578.49Show/hide
Query:  MAVDGVCRLDIGDFPAPPRALSSLDKRRRSFSLLISSPLMIVGLSRKNVSYRQLPHQPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGP
        MAVDGVC LD+ DFP PP + ++ +K RRSFSLL SSPLMIVGLSRKNV YRQLPHQPL LSVLKLDGSCFDIQV++SATVAELKGAVE VFSHMPQ+GP
Subjt:  MAVDGVCRLDIGDFPAPPRALSSLDKRRRSFSLLISSPLMIVGLSRKNVSYRQLPHQPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGP

Query:  GKISWLHVWWHFCLCYAGEKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKEYVVSSKLHSRTSSRSKSHKQNNQDN-------YNDIEMGRFQ
        GKISWLHVWWHFCLCY G+KL+DD DYIA+FGIKDGDQLQFVRHVTTGYNVIRKQSK+  VSSKL SR SSRSKS KQN+Q +       YNDIE GR Q
Subjt:  GKISWLHVWWHFCLCYAGEKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKEYVVSSKLHSRTSSRSKSHKQNNQDN-------YNDIEMGRFQ

Query:  HHNNGELFMSPEPKMVVFLGGWFSHTKLASAGRMSINSLVRPSGSRPSLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV
        H+ N +LF++ +PKMVVFLGGWFSHTKLASAG+MSI SLVRPS +RPSLV G KNL+QLCREKRHY+KV+KKKRSII V
Subjt:  HHNNGELFMSPEPKMVVFLGGWFSHTKLASAGRMSINSLVRPSGSRPSLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV

A0A6J1BY98 uncharacterized protein LOC1110068311.9e-15098.53Show/hide
Query:  MAVDGVCRLDIGDFPAPPRALSSLDKRRRSFSLLISSPLMIVGLSRKNVSYRQLPHQPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGP
        MAVDGVCRLDIGDFPAPPRALSSL KRRRSFSLLISSPLMIVGLSRKNVSYRQLPHQPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGP
Subjt:  MAVDGVCRLDIGDFPAPPRALSSLDKRRRSFSLLISSPLMIVGLSRKNVSYRQLPHQPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGP

Query:  GKISWLHVWWHFCLCYAGEKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKEYVVSSKLHSRTSSRSKSHKQNNQDNYNDIEMGRFQHHNNGEL
        GKISWLHVWWHFCLCYAGEKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQS EYVVSSKLHSRTSSRSKSHK+N+QDNYNDIEMGRFQHHNNGEL
Subjt:  GKISWLHVWWHFCLCYAGEKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKEYVVSSKLHSRTSSRSKSHKQNNQDNYNDIEMGRFQHHNNGEL

Query:  FMSPEPKMVVFLGGWFSHTKLASAGRMSINSLVRPSGSRPSLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV
        FMSPEPKMVVFLGGWFSHTKLASAGRMSINSLVRPSGSRPSLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV
Subjt:  FMSPEPKMVVFLGGWFSHTKLASAGRMSINSLVRPSGSRPSLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV

SwissProt top hitse value%identityAlignment
Q3ZBQ4 U11/U12 small nuclear ribonucleoprotein 25 kDa protein6.0e-0833.33Show/hide
Query:  QPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPG---KISWLHVWWHFCLCYAGEKLVDDTDYIANFGIKDGDQLQFVR
        Q + + V K+DG    + V ++ATV +LK A++  +  + Q+  G    ISW +VW  + L  AGEKL +D   + ++GI++ D++ F++
Subjt:  QPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPG---KISWLHVWWHFCLCYAGEKLVDDTDYIANFGIKDGDQLQFVR

Q84WS8 U11/U12 small nuclear ribonucleoprotein 25 kDa protein3.1e-1235.96Show/hide
Query:  LHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPG--KISWLHVWWHFCLCYAGEKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQS
        + LSV+KLDGS  D+ V  SAT+ +LK  ++   + M Q   G   ISW HVW +FCL    EKL+DD   + + GI++  Q+ F+ +V         + 
Subjt:  LHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPG--KISWLHVWWHFCLCYAGEKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQS

Query:  KEYVVSSKLHSRTS
        K++ +   LH  +S
Subjt:  KEYVVSSKLHSRTS

Q8VIK1 U11/U12 small nuclear ribonucleoprotein 25 kDa protein4.6e-0833.33Show/hide
Query:  QPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPG---KISWLHVWWHFCLCYAGEKLVDDTDYIANFGIKDGDQLQFVR
        Q + + V K+DG    + V ++ATV +LK A++  +  + Q+  G    ISW +VW  + L  AGEKL +D   + ++GI++ D++ F++
Subjt:  QPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPG---KISWLHVWWHFCLCYAGEKLVDDTDYIANFGIKDGDQLQFVR

Q9BV90 U11/U12 small nuclear ribonucleoprotein 25 kDa protein1.2e-0828.91Show/hide
Query:  LDKRRRSFSLLISSPLMI-----VGLSRKNVSYRQLPHQPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPG---KISWLHVWWHFCLC
        +D  +   ++++  PL+      V L   N        Q + + V K+DG    + V +SATV +LK A++  +  + Q+  G    ISW +VW  + L 
Subjt:  LDKRRRSFSLLISSPLMI-----VGLSRKNVSYRQLPHQPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPG---KISWLHVWWHFCLC

Query:  YAGEKLVDDTDYIANFGIKDGDQLQFVR
         AGEKL +D   + ++GI++ D++ F++
Subjt:  YAGEKLVDDTDYIANFGIKDGDQLQFVR

Arabidopsis top hitse value%identityAlignment
AT1G80060.1 Ubiquitin-like superfamily protein2.6e-2737.69Show/hide
Query:  LSRKNVSYRQLPHQ-PLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCYAGEKLVDDTDYIANFGIKDGDQLQFV
        +S +  SY +LP Q  + LSV+KL+GS FD++V K  +VAELK AVE VF+  P +G G ISW HVW HFCLCY  ++LV+D   I   G+ DGDQL FV
Subjt:  LSRKNVSYRQLPHQ-PLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCYAGEKLVDDTDYIANFGIKDGDQLQFV

Query:  RHVTTGYNVIRKQSKEYVVSSKLHSRTSSRSKSHKQNNQDNYNDIEMGRFQHHNNGELFMSPEPKMVVFLGGWFSHTKLASAGRMSINSLVRPSGSRPS
        RH++  ++ + K+SK       L    SS     +  NQ+     ++    +    +   + E ++V  + GW     L  AGR  ++       S PS
Subjt:  RHVTTGYNVIRKQSKEYVVSSKLHSRTSSRSKSHKQNNQDNYNDIEMGRFQHHNNGELFMSPEPKMVVFLGGWFSHTKLASAGRMSINSLVRPSGSRPS

AT3G07860.1 Ubiquitin-like superfamily protein2.2e-1335.96Show/hide
Query:  LHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPG--KISWLHVWWHFCLCYAGEKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQS
        + LSV+KLDGS  D+ V  SAT+ +LK  ++   + M Q   G   ISW HVW +FCL    EKL+DD   + + GI++  Q+ F+ +V         + 
Subjt:  LHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPG--KISWLHVWWHFCLCYAGEKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQS

Query:  KEYVVSSKLHSRTS
        K++ +   LH  +S
Subjt:  KEYVVSSKLHSRTS

AT4G32270.1 Ubiquitin-like superfamily protein2.2e-3449.68Show/hide
Query:  RRSFSLLISSPLMIVGL-SRKNVSYRQLPHQPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCYAGEKLVDDTD
        RRS +  +S   +I GL  R++ +Y Q+P +P+ L+VLKLDGS F IQV K+ATV ELK AVEA FSH+P  GPGKISW HVW  FCL Y  ++L+++++
Subjt:  RRSFSLLISSPLMIVGL-SRKNVSYRQLPHQPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCYAGEKLVDDTD

Query:  YIANFGIKDGDQLQFVRHVTT-GYNVIRKQSKEYVVSS----KLHSRTSSRSKSH
        Y+  FGIKDGDQL+F+RH++     +++ +SK   VSS    KL S T    K +
Subjt:  YIANFGIKDGDQLQFVRHVTT-GYNVIRKQSKEYVVSS----KLHSRTSSRSKSH

AT4G32270.2 Ubiquitin-like superfamily protein3.1e-2850.78Show/hide
Query:  LPHQPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCYAGEKLVDDTDYIANFGIKDGDQLQFVRHVTT-GYNVI
        +P +P+ L+VLKLDGS F   V K+ATV ELK AVEA FSH+P  GPGKISW HVW  FCL Y  ++L+++++Y+  FGIKDGDQL+F+RH++     ++
Subjt:  LPHQPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCYAGEKLVDDTDYIANFGIKDGDQLQFVRHVTT-GYNVI

Query:  RKQSKEYVVSS----KLHSRTSSRSKSH
        + +SK   VSS    KL S T    K +
Subjt:  RKQSKEYVVSS----KLHSRTSSRSKSH

AT5G25340.1 Ubiquitin-like superfamily protein5.5e-3347.02Show/hide
Query:  RKNVSYRQLPHQPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCYAGEKLVDDTDYIANFGIKDGDQLQFVRHV
        R+  SY +LP++P+ LSVLKLDGS FD+ V  SATV +LK A+E  FSH+P+ GP KISW HVW HFCLC+ G+KL+ DTD I N+G+KDGD+++F  HV
Subjt:  RKNVSYRQLPHQPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCYAGEKLVDDTDYIANFGIKDGDQLQFVRHV

Query:  ------TTGYNVIRKQSKEYVVSSKLHSRTSSRSKSHKQNNQDNYNDIEMG
              + GY+   KQ     V  K      +R     +   D+++D+E G
Subjt:  ------TTGYNVIRKQSKEYVVSSKLHSRTSSRSKSHKQNNQDNYNDIEMG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGTCGACGGCGTTTGCAGACTCGACATCGGCGACTTTCCCGCTCCTCCTAGGGCATTATCGTCCCTCGACAAGCGTCGCCGATCGTTTTCTCTGCTAATTTCCTC
TCCTTTGATGATCGTTGGCCTCTCCAGGAAGAATGTTTCGTATCGACAGCTCCCTCATCAGCCTCTCCACCTCTCCGTTCTCAAGCTCGATGGCTCTTGTTTCGATATTC
AGGTTAAGAAATCTGCCACTGTTGCTGAATTAAAGGGGGCAGTGGAGGCGGTTTTCAGTCACATGCCACAGGATGGACCAGGAAAAATTTCATGGCTCCATGTGTGGTGG
CATTTCTGCTTATGCTATGCTGGTGAGAAGCTAGTTGATGATACGGACTACATTGCAAATTTCGGCATCAAGGATGGTGATCAGCTTCAGTTCGTCCGGCATGTCACAAC
TGGCTACAATGTTATAAGAAAGCAATCAAAGGAATACGTGGTTTCCTCAAAACTGCACAGTAGGACATCATCTCGATCGAAAAGCCACAAGCAAAACAATCAGGACAACT
ACAATGATATAGAGATGGGAAGGTTTCAACATCACAACAACGGTGAACTCTTCATGAGCCCCGAGCCAAAGATGGTCGTCTTTTTGGGAGGGTGGTTTTCACACACCAAG
CTGGCATCTGCGGGAAGAATGAGCATCAATAGCCTGGTTCGTCCATCGGGATCTCGGCCTAGTCTGGTGCGTGGTTTTAAGAACTTAGTACAATTATGCCGTGAAAAACG
CCATTATCAGAAAGTGAGTAAAAAGAAGAGGTCCATCATAGTAGTG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGTCGACGGCGTTTGCAGACTCGACATCGGCGACTTTCCCGCTCCTCCTAGGGCATTATCGTCCCTCGACAAGCGTCGCCGATCGTTTTCTCTGCTAATTTCCTC
TCCTTTGATGATCGTTGGCCTCTCCAGGAAGAATGTTTCGTATCGACAGCTCCCTCATCAGCCTCTCCACCTCTCCGTTCTCAAGCTCGATGGCTCTTGTTTCGATATTC
AGGTTAAGAAATCTGCCACTGTTGCTGAATTAAAGGGGGCAGTGGAGGCGGTTTTCAGTCACATGCCACAGGATGGACCAGGAAAAATTTCATGGCTCCATGTGTGGTGG
CATTTCTGCTTATGCTATGCTGGTGAGAAGCTAGTTGATGATACGGACTACATTGCAAATTTCGGCATCAAGGATGGTGATCAGCTTCAGTTCGTCCGGCATGTCACAAC
TGGCTACAATGTTATAAGAAAGCAATCAAAGGAATACGTGGTTTCCTCAAAACTGCACAGTAGGACATCATCTCGATCGAAAAGCCACAAGCAAAACAATCAGGACAACT
ACAATGATATAGAGATGGGAAGGTTTCAACATCACAACAACGGTGAACTCTTCATGAGCCCCGAGCCAAAGATGGTCGTCTTTTTGGGAGGGTGGTTTTCACACACCAAG
CTGGCATCTGCGGGAAGAATGAGCATCAATAGCCTGGTTCGTCCATCGGGATCTCGGCCTAGTCTGGTGCGTGGTTTTAAGAACTTAGTACAATTATGCCGTGAAAAACG
CCATTATCAGAAAGTGAGTAAAAAGAAGAGGTCCATCATAGTAGTG
Protein sequenceShow/hide protein sequence
MAVDGVCRLDIGDFPAPPRALSSLDKRRRSFSLLISSPLMIVGLSRKNVSYRQLPHQPLHLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPGKISWLHVWW
HFCLCYAGEKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKEYVVSSKLHSRTSSRSKSHKQNNQDNYNDIEMGRFQHHNNGELFMSPEPKMVVFLGGWFSHTK
LASAGRMSINSLVRPSGSRPSLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV