CuGenDBv2

Gene ID	MS008525
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	TPD1 protein homolog 1-like
Genome location	scaffold4:1990208..1990516
RNA-Seq Expression	MS008525
Synteny	MS008525
Gene Ontology terms	GO:0001709 - cell fate determination (biological process)
InterPro domains	IPR040361 - Tapetum determinant 1

Homology

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GenBank top hits

e value

%identity

Alignment

KGN60075.1 hypothetical protein Csa_001952 [Cucumis sativus]

4.2e-28

57.84

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Query:  GNCQCSVGDIKVSQSPTGSQVLGKTQWRVTISNNCGCSQLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPLSSTT
        GNC+CS+ DI++SQS TG +V GK +WR TI N C CSQ S+  DC G+ TVE VD +IL  A +VCL N+G+P+  S+PISFTYAWDN +PF+PL S  
Subjt:  GNCQCSVGDIKVSQSPTGSQVLGKTQWRVTISNNCGCSQLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPLSSTT

Query:  YC
         C
Subjt:  YC

XP_022137438.1 uncharacterized protein LOC111008881 isoform X1 [Momordica charantia]

2.9e-53

99.03

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Query:  GNCQCSVGDIKVSQSPTGSQVLGKTQWRVTISNNCGCSQLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPLSSTT
        GNCQCSVG+IKVSQSPTGSQVLGKTQWRVTISNNCGCSQLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPLSSTT
Subjt:  GNCQCSVGDIKVSQSPTGSQVLGKTQWRVTISNNCGCSQLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPLSSTT

Query:  YCG
        YCG
Subjt:  YCG

XP_022137447.1 uncharacterized protein LOC111008881 isoform X2 [Momordica charantia]

2.9e-53

99.03

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Query:  GNCQCSVGDIKVSQSPTGSQVLGKTQWRVTISNNCGCSQLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPLSSTT
        GNCQCSVG+IKVSQSPTGSQVLGKTQWRVTISNNCGCSQLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPLSSTT
Subjt:  GNCQCSVGDIKVSQSPTGSQVLGKTQWRVTISNNCGCSQLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPLSSTT

Query:  YCG
        YCG
Subjt:  YCG

XP_022141896.1 uncharacterized protein At1g05835-like [Momordica charantia]

2.0e-25

54.9

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Query:  GNCQCSVGDIKVSQSPTGSQVLGKTQWRVTISNNCGCSQLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPLSSTT
        GNCQCS+GDI + Q  T  +V G+ +W VT+SNNC CSQ ++ LDC G+ + E VD + L +  N CL N GRP+ KS PISFTYAWD  +PF PLSS  
Subjt:  GNCQCSVGDIKVSQSPTGSQVLGKTQWRVTISNNCGCSQLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPLSSTT

Query:  YC
         C
Subjt:  YC

XP_038896903.1 TPD1 protein homolog 1-like [Benincasa hispida]

2.6e-25

55.88

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Query:  GNCQCSVGDIKVSQSPTGSQVLGKTQWRVTISNNCGCSQLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPLSSTT
        G  QCS+ DI +SQS TG +V GK +WR TI+NNC CSQ S+  DC G+ +VE VD +IL  A + CL N+G+P+ KS PISFTYAWDN + F PL S  
Subjt:  GNCQCSVGDIKVSQSPTGSQVLGKTQWRVTISNNCGCSQLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPLSSTT

Query:  YC
         C
Subjt:  YC

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LDN0 Uncharacterized protein

2.0e-28

57.84

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Query:  GNCQCSVGDIKVSQSPTGSQVLGKTQWRVTISNNCGCSQLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPLSSTT
        GNC+CS+ DI++SQS TG +V GK +WR TI N C CSQ S+  DC G+ TVE VD +IL  A +VCL N+G+P+  S+PISFTYAWDN +PF+PL S  
Subjt:  GNCQCSVGDIKVSQSPTGSQVLGKTQWRVTISNNCGCSQLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPLSSTT

Query:  YC
         C
Subjt:  YC

A0A0A0LEA1 Uncharacterized protein

1.2e-25

55.88

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Query:  GNCQCSVGDIKVSQSPTGSQVLGKTQWRVTISNNCGCSQLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPLSSTT
        GNC+C + DI +SQ+ TGS V GK  W+ TI+NNC C Q S+ LDC G+ TV+ VDP+IL  + +VCL N G+P+ +S PISFTYA DN +PF PLSS  
Subjt:  GNCQCSVGDIKVSQSPTGSQVLGKTQWRVTISNNCGCSQLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPLSSTT

Query:  YC
         C
Subjt:  YC

A0A6J1C8A1 uncharacterized protein LOC111008881 isoform X2

1.4e-53

99.03

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Query:  GNCQCSVGDIKVSQSPTGSQVLGKTQWRVTISNNCGCSQLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPLSSTT
        GNCQCSVG+IKVSQSPTGSQVLGKTQWRVTISNNCGCSQLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPLSSTT
Subjt:  GNCQCSVGDIKVSQSPTGSQVLGKTQWRVTISNNCGCSQLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPLSSTT

Query:  YCG
        YCG
Subjt:  YCG

A0A6J1CAC8 uncharacterized protein LOC111008881 isoform X1

1.4e-53

99.03

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Query:  GNCQCSVGDIKVSQSPTGSQVLGKTQWRVTISNNCGCSQLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPLSSTT
        GNCQCSVG+IKVSQSPTGSQVLGKTQWRVTISNNCGCSQLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPLSSTT
Subjt:  GNCQCSVGDIKVSQSPTGSQVLGKTQWRVTISNNCGCSQLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPLSSTT

Query:  YCG
        YCG
Subjt:  YCG

A0A6J1CKK7 uncharacterized protein At1g05835-like

9.5e-26

54.9

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Query:  GNCQCSVGDIKVSQSPTGSQVLGKTQWRVTISNNCGCSQLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPLSSTT
        GNCQCS+GDI + Q  T  +V G+ +W VT+SNNC CSQ ++ LDC G+ + E VD + L +  N CL N GRP+ KS PISFTYAWD  +PF PLSS  
Subjt:  GNCQCSVGDIKVSQSPTGSQVLGKTQWRVTISNNCGCSQLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPLSSTT

Query:  YC
         C
Subjt:  YC

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G32090.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein

3.7e-14

36.73

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Query:  GNCQCSVGDIKVSQSPTGSQVLGKTQWRVTISNNCGCSQLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPLSS
        G C C+ G I++    TG ++ G+ +W+VT+ N C C Q  + L C G+   + V P +L    N CL   G  L   A   FTYA   PY F P+ S
Subjt:  GNCQCSVGDIKVSQSPTGSQVLGKTQWRVTISNNCGCSQLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPLSS

AT4G32110.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein

5.9e-12

31.07

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Query:  GNCQCSVGDIKVSQSPTGSQVLGKTQWRVTISNNC-GCSQLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPLSST
        G   CS+  + V QS TG  V  K +W V ++N C  C   +  L CVG+ +V  +D ++L  + + CL N+G+ ++    I F Y WD  +    +   
Subjt:  GNCQCSVGDIKVSQSPTGSQVLGKTQWRVTISNNC-GCSQLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPLSST

Query:  TYC
          C
Subjt:  TYC

Sequences

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CDS sequence

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GGTAATTGCCAATGCTCTGTGGGTGACATAAAAGTGAGCCAAAGCCCGACAGGATCCCAAGTGCTGGGAAAGACACAATGGAGAGTTACAATCTCAAACAACTGTGGTTG
TTCACAGCTAAGCATATTGTTGGATTGCGTTGGATATCAGACAGTGGAGAATGTTGATCCAGCAATACTGAACAGTGCTGCCAATGTTTGTCTGTTTAACAGTGGAAGGC
CACTCCTCAAATCAGCCCCCATTTCCTTCACTTATGCTTGGGATAATCCCTACCCTTTCACCCCCCTCTCCTCCACAACTTACTGTGGT

mRNA sequence

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Protein sequence

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GNCQCSVGDIKVSQSPTGSQVLGKTQWRVTISNNCGCSQLSILLDCVGYQTVENVDPAILNSAANVCLFNSGRPLLKSAPISFTYAWDNPYPFTPLSSTTYCG

MS008525 (gene) of Bitter gourd (TR) v1 genome