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MS008529 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008529
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionBeta-1,3-N-Acetylglucosaminyltransferase family protein
Genome locationscaffold4:2003046..2003360
RNA-Seq ExpressionMS008529
SyntenyMS008529
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR040361 - Tapetum determinant 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN60075.1 hypothetical protein Csa_001952 [Cucumis sativus]1.2e-2251.43Show/hide
Query:  EGGWGCSMEDLAIRQTPTGEMVNGKREWRVRISNECKNCTQLNVRFKCGGFKTAKAIKLTILAKMGAQCVVNAGLPIYSSIPITFTYAWDPSFNFTPFFS
        +G   CSM D+ I Q+ TG  VNGK+EWR  I N+C  C+Q +V+F C GF T + +  +IL   G+ C+VN G PI++S PI+FTYAWD +F F+P FS
Subjt:  EGGWGCSMEDLAIRQTPTGEMVNGKREWRVRISNECKNCTQLNVRFKCGGFKTAKAIKLTILAKMGAQCVVNAGLPIYSSIPITFTYAWDPSFNFTPFFS

Query:  QVVCS
        QV CS
Subjt:  QVVCS

TYG36514.1 hypothetical protein ES288_D13G071000v1 [Gossypium darwinii]2.1e-1943.81Show/hide
Query:  EGGWGCSMEDLAIRQTPTGEMVNGKREWRVRISNECKNCTQLNVRFKCGGFKTAKAIKLTILAKMGAQCVVNAGLPIYSSIPITFTYAWDPSFNFTPFFS
        +G   C++ D+ I QT TG+ V  K EW+  + N+C  CTQ +++  C GF+T KA+  +++AK GA+C++N G P+ SS  ++F YAWD SF F P  S
Subjt:  EGGWGCSMEDLAIRQTPTGEMVNGKREWRVRISNECKNCTQLNVRFKCGGFKTAKAIKLTILAKMGAQCVVNAGLPIYSSIPITFTYAWDPSFNFTPFFS

Query:  QVVCS
        Q+ CS
Subjt:  QVVCS

XP_016704590.1 TPD1 protein homolog 1-like [Gossypium hirsutum]2.8e-1943.81Show/hide
Query:  EGGWGCSMEDLAIRQTPTGEMVNGKREWRVRISNECKNCTQLNVRFKCGGFKTAKAIKLTILAKMGAQCVVNAGLPIYSSIPITFTYAWDPSFNFTPFFS
        +G   C++ D+ I QT TG+ V  K EW+  + N+C  CTQ +++  C GF+T KA+  +++AK GA+C++N G P+ SS  ++F YAWD SF F P  S
Subjt:  EGGWGCSMEDLAIRQTPTGEMVNGKREWRVRISNECKNCTQLNVRFKCGGFKTAKAIKLTILAKMGAQCVVNAGLPIYSSIPITFTYAWDPSFNFTPFFS

Query:  QVVCS
        Q+ CS
Subjt:  QVVCS

XP_022141668.1 TPD1 protein homolog 1-like [Momordica charantia]5.9e-5498.1Show/hide
Query:  EGGWGCSMEDLAIRQTPTGEMVNGKREWRVRISNECKNCTQLNVRFKCGGFKTAKAIKLTILAKMGAQCVVNAGLPIYSSIPITFTYAWDPSFNFTPFFS
        +GGWGCSMEDLAIRQTPTGEMVNGKREWRVRISNECKNCTQLNVRFKCGGFKTAKAIKLTILAKMGAQCVVNAGLPIYSSIPITFTYAWDP FNFTPFFS
Subjt:  EGGWGCSMEDLAIRQTPTGEMVNGKREWRVRISNECKNCTQLNVRFKCGGFKTAKAIKLTILAKMGAQCVVNAGLPIYSSIPITFTYAWDPSFNFTPFFS

Query:  QVVCS
        QVVCS
Subjt:  QVVCS

XP_038896903.1 TPD1 protein homolog 1-like [Benincasa hispida]2.7e-2251Show/hide
Query:  CSMEDLAIRQTPTGEMVNGKREWRVRISNECKNCTQLNVRFKCGGFKTAKAIKLTILAKMGAQCVVNAGLPIYSSIPITFTYAWDPSFNFTPFFSQVVCS
        CSM D+ I Q+ TG+ VNGK+EWR  I+N C  C+Q +V+F C GF + + +  +IL   G++C+VN G P++ S PI+FTYAWD +F+F P FSQV CS
Subjt:  CSMEDLAIRQTPTGEMVNGKREWRVRISNECKNCTQLNVRFKCGGFKTAKAIKLTILAKMGAQCVVNAGLPIYSSIPITFTYAWDPSFNFTPFFSQVVCS

TrEMBL top hitse value%identityAlignment
A0A0A0LDN0 Uncharacterized protein5.9e-2351.43Show/hide
Query:  EGGWGCSMEDLAIRQTPTGEMVNGKREWRVRISNECKNCTQLNVRFKCGGFKTAKAIKLTILAKMGAQCVVNAGLPIYSSIPITFTYAWDPSFNFTPFFS
        +G   CSM D+ I Q+ TG  VNGK+EWR  I N+C  C+Q +V+F C GF T + +  +IL   G+ C+VN G PI++S PI+FTYAWD +F F+P FS
Subjt:  EGGWGCSMEDLAIRQTPTGEMVNGKREWRVRISNECKNCTQLNVRFKCGGFKTAKAIKLTILAKMGAQCVVNAGLPIYSSIPITFTYAWDPSFNFTPFFS

Query:  QVVCS
        QV CS
Subjt:  QVVCS

A0A1U8KQ74 TPD1 protein homolog 1-like1.3e-1943.81Show/hide
Query:  EGGWGCSMEDLAIRQTPTGEMVNGKREWRVRISNECKNCTQLNVRFKCGGFKTAKAIKLTILAKMGAQCVVNAGLPIYSSIPITFTYAWDPSFNFTPFFS
        +G   C++ D+ I QT TG+ V  K EW+  + N+C  CTQ +++  C GF+T KA+  +++AK GA+C++N G P+ SS  ++F YAWD SF F P  S
Subjt:  EGGWGCSMEDLAIRQTPTGEMVNGKREWRVRISNECKNCTQLNVRFKCGGFKTAKAIKLTILAKMGAQCVVNAGLPIYSSIPITFTYAWDPSFNFTPFFS

Query:  QVVCS
        Q+ CS
Subjt:  QVVCS

A0A5D1ZV64 Uncharacterized protein1.0e-1943.81Show/hide
Query:  EGGWGCSMEDLAIRQTPTGEMVNGKREWRVRISNECKNCTQLNVRFKCGGFKTAKAIKLTILAKMGAQCVVNAGLPIYSSIPITFTYAWDPSFNFTPFFS
        +G   C++ D+ I QT TG+ V  K EW+  + N+C  CTQ +++  C GF+T KA+  +++AK GA+C++N G P+ SS  ++F YAWD SF F P  S
Subjt:  EGGWGCSMEDLAIRQTPTGEMVNGKREWRVRISNECKNCTQLNVRFKCGGFKTAKAIKLTILAKMGAQCVVNAGLPIYSSIPITFTYAWDPSFNFTPFFS

Query:  QVVCS
        Q+ CS
Subjt:  QVVCS

A0A5D2HU40 Uncharacterized protein1.3e-1943.81Show/hide
Query:  EGGWGCSMEDLAIRQTPTGEMVNGKREWRVRISNECKNCTQLNVRFKCGGFKTAKAIKLTILAKMGAQCVVNAGLPIYSSIPITFTYAWDPSFNFTPFFS
        +G   C++ D+ I QT TG+ V  K EW+  + N+C  CTQ +++  C GF+T KA+  +++AK GA+C++N G P+ SS  ++F YAWD SF F P  S
Subjt:  EGGWGCSMEDLAIRQTPTGEMVNGKREWRVRISNECKNCTQLNVRFKCGGFKTAKAIKLTILAKMGAQCVVNAGLPIYSSIPITFTYAWDPSFNFTPFFS

Query:  QVVCS
        Q+ CS
Subjt:  QVVCS

A0A6J1CL63 TPD1 protein homolog 1-like2.9e-5498.1Show/hide
Query:  EGGWGCSMEDLAIRQTPTGEMVNGKREWRVRISNECKNCTQLNVRFKCGGFKTAKAIKLTILAKMGAQCVVNAGLPIYSSIPITFTYAWDPSFNFTPFFS
        +GGWGCSMEDLAIRQTPTGEMVNGKREWRVRISNECKNCTQLNVRFKCGGFKTAKAIKLTILAKMGAQCVVNAGLPIYSSIPITFTYAWDP FNFTPFFS
Subjt:  EGGWGCSMEDLAIRQTPTGEMVNGKREWRVRISNECKNCTQLNVRFKCGGFKTAKAIKLTILAKMGAQCVVNAGLPIYSSIPITFTYAWDPSFNFTPFFS

Query:  QVVCS
        QVVCS
Subjt:  QVVCS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G32100.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein9.6e-1033.33Show/hide
Query:  SMEDLAIRQTPTGEMVNGKREWRVRISNECKNCTQLNVRFKCGGFKTAKAIKLTILAKMGAQCVVNAGLPIYSSIPITFTYAWDPSFNFTPFFSQVVCS
        S+E L++ Q+ TG MV  K EW V++ N    C   +    C  FK+   I   +L+K G  C++  G  I+    I+F Y WD SF+       + CS
Subjt:  SMEDLAIRQTPTGEMVNGKREWRVRISNECKNCTQLNVRFKCGGFKTAKAIKLTILAKMGAQCVVNAGLPIYSSIPITFTYAWDPSFNFTPFFSQVVCS

AT4G32105.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein1.8e-1633.65Show/hide
Query:  EGGWGCSMEDLAIRQTPTGEMVNGKREWRVRISNECKNCTQLNVRFKCGGFKTAKAIKLTILAKMGAQCVVNAGLPIYSSIPITFTYAWDPSFNFTPFFS
        +G   C +  L+++Q+ TG++V  K EW VR++N C NC     +  C GF++   +  ++L+K G  C++NAG  I+  +   F Y WD SF+      
Subjt:  EGGWGCSMEDLAIRQTPTGEMVNGKREWRVRISNECKNCTQLNVRFKCGGFKTAKAIKLTILAKMGAQCVVNAGLPIYSSIPITFTYAWDPSFNFTPFFS

Query:  QVVC
         +VC
Subjt:  QVVC

AT4G32110.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein5.6e-1838.46Show/hide
Query:  EGGWGCSMEDLAIRQTPTGEMVNGKREWRVRISNECKNCTQLNVRFKCGGFKTAKAIKLTILAKMGAQCVVNAGLPIYSSIPITFTYAWDPSFNFTPFFS
        +G   CS+  L+++Q+ TG++V  K EW VR++N C NC   N    C GF +   I  ++L K G  C+VNAG  I   + I F Y WD SF+      
Subjt:  EGGWGCSMEDLAIRQTPTGEMVNGKREWRVRISNECKNCTQLNVRFKCGGFKTAKAIKLTILAKMGAQCVVNAGLPIYSSIPITFTYAWDPSFNFTPFFS

Query:  QVVC
         +VC
Subjt:  QVVC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAAGGGGGCTGGGGATGCTCTATGGAGGACTTGGCAATCAGGCAAACTCCAACCGGGGAAATGGTAAATGGGAAAAGAGAATGGAGAGTTAGAATCAGCAATGAATGCAA
AAATTGCACTCAGTTGAATGTGAGATTCAAGTGTGGAGGTTTCAAGACAGCTAAAGCCATCAAACTCACCATCTTAGCCAAGATGGGGGCTCAATGTGTGGTCAATGCTG
GCCTTCCAATCTATTCCTCTATTCCCATCACCTTCACTTATGCATGGGACCCTTCATTTAATTTCACCCCTTTCTTCTCCCAAGTTGTTTGTTCC
mRNA sequenceShow/hide mRNA sequence
GAAGGGGGCTGGGGATGCTCTATGGAGGACTTGGCAATCAGGCAAACTCCAACCGGGGAAATGGTAAATGGGAAAAGAGAATGGAGAGTTAGAATCAGCAATGAATGCAA
AAATTGCACTCAGTTGAATGTGAGATTCAAGTGTGGAGGTTTCAAGACAGCTAAAGCCATCAAACTCACCATCTTAGCCAAGATGGGGGCTCAATGTGTGGTCAATGCTG
GCCTTCCAATCTATTCCTCTATTCCCATCACCTTCACTTATGCATGGGACCCTTCATTTAATTTCACCCCTTTCTTCTCCCAAGTTGTTTGTTCC
Protein sequenceShow/hide protein sequence
EGGWGCSMEDLAIRQTPTGEMVNGKREWRVRISNECKNCTQLNVRFKCGGFKTAKAIKLTILAKMGAQCVVNAGLPIYSSIPITFTYAWDPSFNFTPFFSQVVCS