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MS008552 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008552
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionchaperone protein ClpB3, mitochondrial
Genome locationscaffold4:2179500..2179598
RNA-Seq ExpressionMS008552
SyntenyMS008552
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132070.1 chaperone protein ClpB3, mitochondrial [Momordica charantia]1.2e-0581.82Show/hide
Query:  ESFRLEFMNRITEYIVFQPLDATQICKIGEIQV
        ++FR EFMNRI EYIVFQPLDATQICKI EIQ+
Subjt:  ESFRLEFMNRITEYIVFQPLDATQICKIGEIQV
XP_022976098.1 chaperone protein ClpB3, mitochondrial [Cucurbita maxima]1.2e-0581.82Show/hide
Query:  ESFRLEFMNRITEYIVFQPLDATQICKIGEIQV
        ++FR EFMNRI EYIVFQPLDATQICKI EIQ+
Subjt:  ESFRLEFMNRITEYIVFQPLDATQICKIGEIQV
XP_023535241.1 chaperone protein ClpB3, mitochondrial [Cucurbita pepo subsp. pepo]1.2e-0581.82Show/hide
Query:  ESFRLEFMNRITEYIVFQPLDATQICKIGEIQV
        ++FR EFMNRI EYIVFQPLDATQICKI EIQ+
Subjt:  ESFRLEFMNRITEYIVFQPLDATQICKIGEIQV
XP_038898368.1 chaperone protein ClpB4, mitochondrial isoform X1 [Benincasa hispida]1.2e-0581.82Show/hide
Query:  ESFRLEFMNRITEYIVFQPLDATQICKIGEIQV
        ++FR EFMNRI EYIVFQPLDATQICKI EIQ+
Subjt:  ESFRLEFMNRITEYIVFQPLDATQICKIGEIQV
XP_038898369.1 chaperone protein ClpB3, mitochondrial isoform X2 [Benincasa hispida]1.2e-0581.82Show/hide
Query:  ESFRLEFMNRITEYIVFQPLDATQICKIGEIQV
        ++FR EFMNRI EYIVFQPLDATQICKI EIQ+
Subjt:  ESFRLEFMNRITEYIVFQPLDATQICKIGEIQV
TrEMBL top hitse value%identityAlignment
A0A5A7VFW7 Chaperone protein ClpB41.5e-0475.76Show/hide
Query:  ESFRLEFMNRITEYIVFQPLDATQICKIGEIQV
        ++FR EFMNRI EYIVFQPLDATQI KI E+Q+
Subjt:  ESFRLEFMNRITEYIVFQPLDATQICKIGEIQV
A0A5D3D8Y0 Chaperone protein ClpB41.5e-0475.76Show/hide
Query:  ESFRLEFMNRITEYIVFQPLDATQICKIGEIQV
        ++FR EFMNRI EYIVFQPLDATQI KI E+Q+
Subjt:  ESFRLEFMNRITEYIVFQPLDATQICKIGEIQV
A0A6J1BRF2 chaperone protein ClpB3, mitochondrial5.9e-0681.82Show/hide
Query:  ESFRLEFMNRITEYIVFQPLDATQICKIGEIQV
        ++FR EFMNRI EYIVFQPLDATQICKI EIQ+
Subjt:  ESFRLEFMNRITEYIVFQPLDATQICKIGEIQV
A0A6J1F804 chaperone protein ClpB3, mitochondrial5.9e-0681.82Show/hide
Query:  ESFRLEFMNRITEYIVFQPLDATQICKIGEIQV
        ++FR EFMNRI EYIVFQPLDATQICKI EIQ+
Subjt:  ESFRLEFMNRITEYIVFQPLDATQICKIGEIQV
A0A6J1IIK3 chaperone protein ClpB3, mitochondrial5.9e-0681.82Show/hide
Query:  ESFRLEFMNRITEYIVFQPLDATQICKIGEIQV
        ++FR EFMNRI EYIVFQPLDATQICKI EIQ+
Subjt:  ESFRLEFMNRITEYIVFQPLDATQICKIGEIQV
SwissProt top hitse value%identityAlignment
Q0E3C8 Chaperone protein ClpB3, mitochondrial9.8e-0669.7Show/hide
Query:  ESFRLEFMNRITEYIVFQPLDATQICKIGEIQV
        +SFR EF+NRI EYIVFQPLD T+I +I EIQ+
Subjt:  ESFRLEFMNRITEYIVFQPLDATQICKIGEIQV
Q8VYJ7 Chaperone protein ClpB4, mitochondrial1.3e-0566.67Show/hide
Query:  ESFRLEFMNRITEYIVFQPLDATQICKIGEIQV
        ++FR EFMNRI EYIVFQPLD+ +I KI E+Q+
Subjt:  ESFRLEFMNRITEYIVFQPLDATQICKIGEIQV
Arabidopsis top hitse value%identityAlignment
AT2G25140.1 casein lytic proteinase B49.1e-0766.67Show/hide
Query:  ESFRLEFMNRITEYIVFQPLDATQICKIGEIQV
        ++FR EFMNRI EYIVFQPLD+ +I KI E+Q+
Subjt:  ESFRLEFMNRITEYIVFQPLDATQICKIGEIQV
AT5G15450.1 casein lytic proteinase B31.4e-0461.29Show/hide
Query:  FRLEFMNRITEYIVFQPLDATQICKIGEIQV
        FR EFMNR+ EYIVF+PLD  QI +I  +Q+
Subjt:  FRLEFMNRITEYIVFQPLDATQICKIGEIQV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAAAGTTTTCGGTTAGAGTTTATGAATAGAATTACTGAATATATTGTCTTCCAACCTTTGGACGCTACCCAAATATGCAAGATTGGTGAGATTCAGGTA
mRNA sequenceShow/hide mRNA sequence
GAAAGTTTTCGGTTAGAGTTTATGAATAGAATTACTGAATATATTGTCTTCCAACCTTTGGACGCTACCCAAATATGCAAGATTGGTGAGATTCAGGTA
Protein sequenceShow/hide protein sequence
ESFRLEFMNRITEYIVFQPLDATQICKIGEIQV