CuGenDBv2

Gene ID	MS008566
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Transmembrane protein
Genome location	scaffold4:2292691..2292990
RNA-Seq Expression	MS008566
Synteny	MS008566
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0064577.1 uncharacterized protein E6C27_scaffold255G002980 [Cucumis melo var. makuwa]

8.2e-45

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Query:  MGSNEEWRKNADTHKMTPEDVRAAGVEASKRPPGHHPGTILHQRRSLPYSYTTMTIAGLLVIGATGYFTLYALKKPDASAKDVAKVAANVAEPEDTKPRK
        MGSNEEWRKNADTHKM PEDV+AAGVEASKRPPGHHPGTILHQRRSLPYSYTTMT+AGLL++GA GYFTLY++KKP+ASAKDVAKVA NVAEPEDTKPRK
Subjt:  MGSNEEWRKNADTHKMTPEDVRAAGVEASKRPPGHHPGTILHQRRSLPYSYTTMTIAGLLVIGATGYFTLYALKKPDASAKDVAKVAANVAEPEDTKPRK

XP_004145498.1 uncharacterized protein LOC101212329 [Cucumis sativus]

3.4e-43

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Query:  MGSNEEWRKNADTHKMTPEDVRAAGVEASKRPPGHHPGTILHQRRSLPYSYTTMTIAGLLVIGATGYFTLYALKKPDASAKDVAKVAANVAEPEDTKPRK
        MGSNEEWRKNADTHKM PEDV+AAGVEASKRPPGHHPGT+LHQRRSLPYSYTTMT+AGLL++G  GY TLY LKKP+ASAKDVAKVA NVAEPE+TKPRK
Subjt:  MGSNEEWRKNADTHKMTPEDVRAAGVEASKRPPGHHPGTILHQRRSLPYSYTTMTIAGLLVIGATGYFTLYALKKPDASAKDVAKVAANVAEPEDTKPRK

XP_008452845.1 PREDICTED: uncharacterized protein LOC103493743 [Cucumis melo]

8.2e-45

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Query:  MGSNEEWRKNADTHKMTPEDVRAAGVEASKRPPGHHPGTILHQRRSLPYSYTTMTIAGLLVIGATGYFTLYALKKPDASAKDVAKVAANVAEPEDTKPRK
        MGSNEEWRKNADTHKM PEDV+AAGVEASKRPPGHHPGTILHQRRSLPYSYTTMT+AGLL++GA GYFTLY++KKP+ASAKDVAKVA NVAEPEDTKPRK
Subjt:  MGSNEEWRKNADTHKMTPEDVRAAGVEASKRPPGHHPGTILHQRRSLPYSYTTMTIAGLLVIGATGYFTLYALKKPDASAKDVAKVAANVAEPEDTKPRK

XP_022132331.1 uncharacterized protein LOC111005207 [Momordica charantia]

2.1e-48

100

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Query:  MGSNEEWRKNADTHKMTPEDVRAAGVEASKRPPGHHPGTILHQRRSLPYSYTTMTIAGLLVIGATGYFTLYALKKPDASAKDVAKVAANVAEPEDTKPRK
        MGSNEEWRKNADTHKMTPEDVRAAGVEASKRPPGHHPGTILHQRRSLPYSYTTMTIAGLLVIGATGYFTLYALKKPDASAKDVAKVAANVAEPEDTKPRK
Subjt:  MGSNEEWRKNADTHKMTPEDVRAAGVEASKRPPGHHPGTILHQRRSLPYSYTTMTIAGLLVIGATGYFTLYALKKPDASAKDVAKVAANVAEPEDTKPRK

XP_022940906.1 uncharacterized protein LOC111446354 [Cucurbita moschata]

3.8e-42

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Query:  MGSNEEWRKNADTHKMTPEDVRAAGVEASKRPPGHHPGTILHQRRSLPYSYTTMTIAGLLVIGATGYFTLYALKKPDASAKDVAKVAANVAEPEDTKPRK
        MGSNEEWRKNADTHKM PEDV+AAGVEASKRPPGHHPGT LHQRRSLPYS TTMTIAGL ++GA GY TLY +KKP+ASAKDVAKVA NVAEPEDTKPRK
Subjt:  MGSNEEWRKNADTHKMTPEDVRAAGVEASKRPPGHHPGTILHQRRSLPYSYTTMTIAGLLVIGATGYFTLYALKKPDASAKDVAKVAANVAEPEDTKPRK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L315 Uncharacterized protein

1.7e-43

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Query:  MGSNEEWRKNADTHKMTPEDVRAAGVEASKRPPGHHPGTILHQRRSLPYSYTTMTIAGLLVIGATGYFTLYALKKPDASAKDVAKVAANVAEPEDTKPRK
        MGSNEEWRKNADTHKM PEDV+AAGVEASKRPPGHHPGT+LHQRRSLPYSYTTMT+AGLL++G  GY TLY LKKP+ASAKDVAKVA NVAEPE+TKPRK
Subjt:  MGSNEEWRKNADTHKMTPEDVRAAGVEASKRPPGHHPGTILHQRRSLPYSYTTMTIAGLLVIGATGYFTLYALKKPDASAKDVAKVAANVAEPEDTKPRK

A0A1S3BVM2 uncharacterized protein LOC103493743

4.0e-45

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Query:  MGSNEEWRKNADTHKMTPEDVRAAGVEASKRPPGHHPGTILHQRRSLPYSYTTMTIAGLLVIGATGYFTLYALKKPDASAKDVAKVAANVAEPEDTKPRK
        MGSNEEWRKNADTHKM PEDV+AAGVEASKRPPGHHPGTILHQRRSLPYSYTTMT+AGLL++GA GYFTLY++KKP+ASAKDVAKVA NVAEPEDTKPRK
Subjt:  MGSNEEWRKNADTHKMTPEDVRAAGVEASKRPPGHHPGTILHQRRSLPYSYTTMTIAGLLVIGATGYFTLYALKKPDASAKDVAKVAANVAEPEDTKPRK

A0A5A7VC84 Uncharacterized protein

4.0e-45

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Query:  MGSNEEWRKNADTHKMTPEDVRAAGVEASKRPPGHHPGTILHQRRSLPYSYTTMTIAGLLVIGATGYFTLYALKKPDASAKDVAKVAANVAEPEDTKPRK
        MGSNEEWRKNADTHKM PEDV+AAGVEASKRPPGHHPGTILHQRRSLPYSYTTMT+AGLL++GA GYFTLY++KKP+ASAKDVAKVA NVAEPEDTKPRK
Subjt:  MGSNEEWRKNADTHKMTPEDVRAAGVEASKRPPGHHPGTILHQRRSLPYSYTTMTIAGLLVIGATGYFTLYALKKPDASAKDVAKVAANVAEPEDTKPRK

A0A6J1BRZ2 uncharacterized protein LOC111005207

1.0e-48

100

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Query:  MGSNEEWRKNADTHKMTPEDVRAAGVEASKRPPGHHPGTILHQRRSLPYSYTTMTIAGLLVIGATGYFTLYALKKPDASAKDVAKVAANVAEPEDTKPRK
        MGSNEEWRKNADTHKMTPEDVRAAGVEASKRPPGHHPGTILHQRRSLPYSYTTMTIAGLLVIGATGYFTLYALKKPDASAKDVAKVAANVAEPEDTKPRK
Subjt:  MGSNEEWRKNADTHKMTPEDVRAAGVEASKRPPGHHPGTILHQRRSLPYSYTTMTIAGLLVIGATGYFTLYALKKPDASAKDVAKVAANVAEPEDTKPRK

A0A6J1FJP6 uncharacterized protein LOC111446354

1.8e-42

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Query:  MGSNEEWRKNADTHKMTPEDVRAAGVEASKRPPGHHPGTILHQRRSLPYSYTTMTIAGLLVIGATGYFTLYALKKPDASAKDVAKVAANVAEPEDTKPRK
        MGSNEEWRKNADTHKM PEDV+AAGVEASKRPPGHHPGT LHQRRSLPYS TTMTIAGL ++GA GY TLY +KKP+ASAKDVAKVA NVAEPEDTKPRK
Subjt:  MGSNEEWRKNADTHKMTPEDVRAAGVEASKRPPGHHPGTILHQRRSLPYSYTTMTIAGLLVIGATGYFTLYALKKPDASAKDVAKVAANVAEPEDTKPRK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G31830.1 unknown protein

3.2e-31

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Query:  MGSNEEWRKNADTHKMTPEDVRAAGVEASKRPPGHHPGTILHQRRSLPYSYTTMTIAGLLVIGATGYFTLYALKKPDASAKDVAKVAANVAEPEDTKPRK
        M   E+WRK ADT KM+ E V+AAGVE+SKRPPG +PG +LHQRR+LPYSYTTM +AGL + GA  Y  +YA KKP+A+A DVAK A   A+PEDT PRK
Subjt:  MGSNEEWRKNADTHKMTPEDVRAAGVEASKRPPGHHPGTILHQRRSLPYSYTTMTIAGLLVIGATGYFTLYALKKPDASAKDVAKVAANVAEPEDTKPRK

Sequences

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CDS sequence

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ATGGGAAGCAATGAAGAGTGGAGGAAAAATGCAGATACCCACAAAATGACGCCTGAGGATGTGAGAGCAGCGGGAGTGGAAGCCTCCAAAAGGCCGCCGGGGCACCACCC
AGGCACAATTCTGCACCAGCGGCGGAGCCTCCCCTACAGCTACACCACCATGACCATCGCCGGCCTCCTCGTCATCGGAGCCACCGGATACTTCACCTTATATGCCCTCA
AAAAGCCCGACGCCTCCGCCAAAGACGTCGCCAAGGTCGCCGCCAACGTCGCAGAGCCTGAAGACACCAAGCCCAGGAAG

mRNA sequence

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Protein sequence

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MGSNEEWRKNADTHKMTPEDVRAAGVEASKRPPGHHPGTILHQRRSLPYSYTTMTIAGLLVIGATGYFTLYALKKPDASAKDVAKVAANVAEPEDTKPRK

MS008566 (gene) of Bitter gourd (TR) v1 genome