; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS008600 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008600
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein of unknown function (DUF1677)
Genome locationscaffold4:2504998..2505441
RNA-Seq ExpressionMS008600
SyntenyMS008600
Gene Ontology termsNA
InterPro domainsIPR012876 - Protein of unknown function DUF1677, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591497.1 hypothetical protein SDJN03_13843, partial [Cucurbita argyrosperma subsp. sororia]2.7e-6888.51Show/hide
Query:  MAARVTKAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPP
        MAA+VTKAISGIE  AP TQH AQVIDVESVKCECCGLTEECTPAYIGRVRERY+G WICGLC+EAVKDESLRSQ NITTGEAVKRHMKFHK FKSS PP
Subjt:  MAARVTKAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPP

Query:  VNPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD
        +NPTEDLISAMKQLLRRSLDSPK D SRSL RS+SCFSAMPGRR+HYD
Subjt:  VNPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD

XP_022159335.1 uncharacterized protein LOC111025749 [Momordica charantia]1.3e-7597.3Show/hide
Query:  MAARVTKAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPP
        MAARVTKAISGIEPPA ATQHGAQV DVESVKCECCGLTEECTPAYIGRVRERYDG WICGLCSEAVKDESLRSQGNITTGEA+KRHMKFHKQFKSSNPP
Subjt:  MAARVTKAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPP

Query:  VNPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD
        VNPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD
Subjt:  VNPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD

XP_022936502.1 uncharacterized protein LOC111443099 [Cucurbita moschata]7.8e-6887.84Show/hide
Query:  MAARVTKAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPP
        MAA+VTKAISGIE  AP TQH AQVIDVESVKCECCGLTEECTPAYIGRVRERY+G WICGLC+EAVKDESLRSQ NITTGEAVKRHMKFHK FKSS PP
Subjt:  MAARVTKAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPP

Query:  VNPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD
        +NPTEDLISAMKQLLRRSLDSPK D SRSL RS+SCFSAMPGR++HYD
Subjt:  VNPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD

XP_022977134.1 uncharacterized protein LOC111477296 [Cucurbita maxima]7.8e-6889.19Show/hide
Query:  MAARVTKAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPP
        MAA+VTKAISGIE  A  TQH AQVIDVESVKCECCGLTEECTPAYIGRVRERY+G WICGLC+EAVKDESLRSQ NITTGEAVKRHMKFHK FKSS PP
Subjt:  MAARVTKAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPP

Query:  VNPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD
        +NPTEDLISAMKQLLRRSLDSPK DASRSL RS+SCFSAMPGRRSHYD
Subjt:  VNPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD

XP_023536550.1 uncharacterized protein LOC111797685 [Cucurbita pepo subsp. pepo]5.4e-6989.86Show/hide
Query:  MAARVTKAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPP
        MAA+VTKAISGIE  AP TQH AQVIDVESVKCECCGLTEECTPAYIGRVRERY+G WICGLC+EAVKDESLRSQ NITTGEAVKRHMKFHK FKSS PP
Subjt:  MAARVTKAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPP

Query:  VNPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD
        +NPTEDLISAMKQLLRRSLDSPK D SRSL RSSSCFSAMPGRRSHYD
Subjt:  VNPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD

TrEMBL top hitse value%identityAlignment
A0A0A0L0X0 Uncharacterized protein1.4e-6286.43Show/hide
Query:  KAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPPVNPTED
        K ISG E  AP TQH  QVIDVESVKCECCGLTEECTPAYIGRVRERY+G WICGLC+EAVKDESLRSQ NITTGEAVKRHMKFHK FKSS PP+NPTED
Subjt:  KAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPPVNPTED

Query:  LISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSH
        LISAMKQLLRRSLDSPK D+SRSL RS+SCFSA+PGRRSH
Subjt:  LISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSH

A0A6J1DYE7 uncharacterized protein LOC1110257496.4e-7697.3Show/hide
Query:  MAARVTKAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPP
        MAARVTKAISGIEPPA ATQHGAQV DVESVKCECCGLTEECTPAYIGRVRERYDG WICGLCSEAVKDESLRSQGNITTGEA+KRHMKFHKQFKSSNPP
Subjt:  MAARVTKAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPP

Query:  VNPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD
        VNPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD
Subjt:  VNPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD

A0A6J1FDW1 uncharacterized protein LOC1114430993.8e-6887.84Show/hide
Query:  MAARVTKAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPP
        MAA+VTKAISGIE  AP TQH AQVIDVESVKCECCGLTEECTPAYIGRVRERY+G WICGLC+EAVKDESLRSQ NITTGEAVKRHMKFHK FKSS PP
Subjt:  MAARVTKAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPP

Query:  VNPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD
        +NPTEDLISAMKQLLRRSLDSPK D SRSL RS+SCFSAMPGR++HYD
Subjt:  VNPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD

A0A6J1IIZ6 uncharacterized protein LOC1114772963.8e-6889.19Show/hide
Query:  MAARVTKAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPP
        MAA+VTKAISGIE  A  TQH AQVIDVESVKCECCGLTEECTPAYIGRVRERY+G WICGLC+EAVKDESLRSQ NITTGEAVKRHMKFHK FKSS PP
Subjt:  MAARVTKAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPP

Query:  VNPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD
        +NPTEDLISAMKQLLRRSLDSPK DASRSL RS+SCFSAMPGRRSHYD
Subjt:  VNPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD

A0A6J1J3W6 uncharacterized protein LOC1114810293.3e-6483.11Show/hide
Query:  MAARVTKAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPP
        MAA+VTK I+ IE   P TQH AQVIDVES+KCECCGLTEECTPAYI RVRERY+G WICGLC+EAVKDES+RSQ  ITTGEAVKRHMKFHK FKSS PP
Subjt:  MAARVTKAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPP

Query:  VNPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD
        VNPTEDLISAMKQL RRSLDSPK DASRSL RS+SCFS+MP RRSHYD
Subjt:  VNPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G72510.1 Protein of unknown function (DUF1677)1.9e-3255.38Show/hide
Query:  ESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPPVNPTEDLISAMKQLLRRSLDSP------
        +SV C+CCGLTEECT +YI  VRERY G WICGLCSEAVK E +R++  +TT EA+ RHM    +FKSS+PP NPT  LISAM+Q+LR+SLDSP      
Subjt:  ESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPPVNPTEDLISAMKQLLRRSLDSP------

Query:  -----KND-------ASRSLSRSSSCFSAM
             K+D        S  LSRS SCF+++
Subjt:  -----KND-------ASRSLSRSSSCFSAM

AT1G72510.2 Protein of unknown function (DUF1677)1.9e-3255.38Show/hide
Query:  ESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPPVNPTEDLISAMKQLLRRSLDSP------
        +SV C+CCGLTEECT +YI  VRERY G WICGLCSEAVK E +R++  +TT EA+ RHM    +FKSS+PP NPT  LISAM+Q+LR+SLDSP      
Subjt:  ESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPPVNPTEDLISAMKQLLRRSLDSP------

Query:  -----KND-------ASRSLSRSSSCFSAM
             K+D        S  LSRS SCF+++
Subjt:  -----KND-------ASRSLSRSSSCFSAM

AT2G09970.1 Protein of unknown function (DUF1677)3.2e-2748.25Show/hide
Query:  PATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITT-GEAVKRHMKFHKQFKSSNPPVNPTEDLISAMKQLL
        P TQ  +  +D  SV C+CCGLT+ECT +Y   +RERY G WI G CSEAVK + +R++  +TT  EA+ RHM    +FKSS+PP N T  LISAM+Q+L
Subjt:  PATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITT-GEAVKRHMKFHKQFKSSNPPVNPTEDLISAMKQLL

Query:  RRSLDSP-----------KND-------ASRSLSRSSSCFSAM
        R+SLDSP           K+D        S  LSRS SCF+++
Subjt:  RRSLDSP-----------KND-------ASRSLSRSSSCFSAM

AT3G22540.1 Protein of unknown function (DUF1677)2.2e-2044.14Show/hide
Query:  IDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPPVNPTEDLISAMKQLL-RRSLDSPKN
        +++ESV+CECCGL E+CT  YI  V+  +D  W+CGLCSEAV+DE  R +   T  EAVK H+ F  +FK  NP V+    +   M+Q+L RRS +   +
Subjt:  IDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPPVNPTEDLISAMKQLL-RRSLDSPKN

Query:  DASRSLSRSSS
          S+   RS++
Subjt:  DASRSLSRSSS

AT5G20670.1 Protein of unknown function (DUF1677)1.3e-2545Show/hide
Query:  TQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPPVNPTEDLISAMKQLLRRS
        T+  + +  VESV C+ CG  EECTPAYI RV+ER+ G W+CGLC+EAVKDE +RS   I+  EA++RH  F  +F+S +P  +  ED IS + ++LRRS
Subjt:  TQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPPVNPTEDLISAMKQLLRRS

Query:  LD-SPKN-----------------DASRSLSRSSSCFSAM
        LD SP+                  ++ RSL RS SCF ++
Subjt:  LD-SPKN-----------------DASRSLSRSSSCFSAM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCGAGAGTGACGAAGGCGATCTCCGGGATCGAGCCGCCGGCTCCGGCGACGCAGCACGGCGCTCAAGTCATCGACGTGGAGTCCGTGAAATGCGAGTGCTGTGG
ATTGACGGAGGAGTGCACTCCGGCGTACATCGGTCGTGTTCGGGAGAGGTACGACGGCAGTTGGATTTGCGGGCTCTGTTCGGAGGCGGTGAAGGACGAGTCTCTCAGAT
CTCAGGGGAACATCACCACCGGCGAAGCCGTGAAGAGGCACATGAAGTTCCACAAACAGTTCAAATCTTCGAATCCGCCGGTGAATCCTACTGAGGATTTGATTTCGGCT
ATGAAACAGCTTCTCCGGCGGTCGCTCGATTCTCCGAAGAACGACGCCTCGCGATCGCTAAGCCGTTCGAGTAGCTGTTTCTCCGCCATGCCAGGGCGGCGAAGCCATTA
CGAT
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCGAGAGTGACGAAGGCGATCTCCGGGATCGAGCCGCCGGCTCCGGCGACGCAGCACGGCGCTCAAGTCATCGACGTGGAGTCCGTGAAATGCGAGTGCTGTGG
ATTGACGGAGGAGTGCACTCCGGCGTACATCGGTCGTGTTCGGGAGAGGTACGACGGCAGTTGGATTTGCGGGCTCTGTTCGGAGGCGGTGAAGGACGAGTCTCTCAGAT
CTCAGGGGAACATCACCACCGGCGAAGCCGTGAAGAGGCACATGAAGTTCCACAAACAGTTCAAATCTTCGAATCCGCCGGTGAATCCTACTGAGGATTTGATTTCGGCT
ATGAAACAGCTTCTCCGGCGGTCGCTCGATTCTCCGAAGAACGACGCCTCGCGATCGCTAAGCCGTTCGAGTAGCTGTTTCTCCGCCATGCCAGGGCGGCGAAGCCATTA
CGAT
Protein sequenceShow/hide protein sequence
MAARVTKAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPPVNPTEDLISA
MKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD