; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS008601 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008601
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein of unknown function (DUF1677)
Genome locationscaffold4:2529622..2530065
RNA-Seq ExpressionMS008601
SyntenyMS008601
Gene Ontology termsNA
InterPro domainsIPR012876 - Protein of unknown function DUF1677, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591497.1 hypothetical protein SDJN03_13843, partial [Cucurbita argyrosperma subsp. sororia]6.0e-6888.51Show/hide
Query:  MAARVTKAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPP
        MAA+VTKAISGIE  AP TQH AQVIDVESVKCECCGLTEECTPAYIGRVRERY+G WICGLC+EAVKDESLRSQ NITTGEAVKRHMKFHK FKSS PP
Subjt:  MAARVTKAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPP

Query:  ANPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD
         NPTEDLISAMKQLLRRSLDSPK D SRSL RS+SCFSAMPGRR+HYD
Subjt:  ANPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD

XP_022159335.1 uncharacterized protein LOC111025749 [Momordica charantia]5.0e-7596.62Show/hide
Query:  MAARVTKAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPP
        MAARVTKAISGIEPPA ATQHGAQV DVESVKCECCGLTEECTPAYIGRVRERYDG WICGLCSEAVKDESLRSQGNITTGEA+KRHMKFHKQFKSSNPP
Subjt:  MAARVTKAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPP

Query:  ANPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD
         NPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD
Subjt:  ANPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD

XP_022936502.1 uncharacterized protein LOC111443099 [Cucurbita moschata]1.7e-6787.84Show/hide
Query:  MAARVTKAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPP
        MAA+VTKAISGIE  AP TQH AQVIDVESVKCECCGLTEECTPAYIGRVRERY+G WICGLC+EAVKDESLRSQ NITTGEAVKRHMKFHK FKSS PP
Subjt:  MAARVTKAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPP

Query:  ANPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD
         NPTEDLISAMKQLLRRSLDSPK D SRSL RS+SCFSAMPGR++HYD
Subjt:  ANPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD

XP_022977134.1 uncharacterized protein LOC111477296 [Cucurbita maxima]1.7e-6789.19Show/hide
Query:  MAARVTKAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPP
        MAA+VTKAISGIE  A  TQH AQVIDVESVKCECCGLTEECTPAYIGRVRERY+G WICGLC+EAVKDESLRSQ NITTGEAVKRHMKFHK FKSS PP
Subjt:  MAARVTKAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPP

Query:  ANPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD
         NPTEDLISAMKQLLRRSLDSPK DASRSL RS+SCFSAMPGRRSHYD
Subjt:  ANPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD

XP_023536550.1 uncharacterized protein LOC111797685 [Cucurbita pepo subsp. pepo]1.2e-6889.86Show/hide
Query:  MAARVTKAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPP
        MAA+VTKAISGIE  AP TQH AQVIDVESVKCECCGLTEECTPAYIGRVRERY+G WICGLC+EAVKDESLRSQ NITTGEAVKRHMKFHK FKSS PP
Subjt:  MAARVTKAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPP

Query:  ANPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD
         NPTEDLISAMKQLLRRSLDSPK D SRSL RSSSCFSAMPGRRSHYD
Subjt:  ANPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD

TrEMBL top hitse value%identityAlignment
A0A0A0L0X0 Uncharacterized protein3.1e-6286.43Show/hide
Query:  KAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPPANPTED
        K ISG E  AP TQH  QVIDVESVKCECCGLTEECTPAYIGRVRERY+G WICGLC+EAVKDESLRSQ NITTGEAVKRHMKFHK FKSS PP NPTED
Subjt:  KAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPPANPTED

Query:  LISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSH
        LISAMKQLLRRSLDSPK D+SRSL RS+SCFSA+PGRRSH
Subjt:  LISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSH

A0A6J1DYE7 uncharacterized protein LOC1110257492.4e-7596.62Show/hide
Query:  MAARVTKAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPP
        MAARVTKAISGIEPPA ATQHGAQV DVESVKCECCGLTEECTPAYIGRVRERYDG WICGLCSEAVKDESLRSQGNITTGEA+KRHMKFHKQFKSSNPP
Subjt:  MAARVTKAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPP

Query:  ANPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD
         NPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD
Subjt:  ANPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD

A0A6J1FDW1 uncharacterized protein LOC1114430998.4e-6887.84Show/hide
Query:  MAARVTKAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPP
        MAA+VTKAISGIE  AP TQH AQVIDVESVKCECCGLTEECTPAYIGRVRERY+G WICGLC+EAVKDESLRSQ NITTGEAVKRHMKFHK FKSS PP
Subjt:  MAARVTKAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPP

Query:  ANPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD
         NPTEDLISAMKQLLRRSLDSPK D SRSL RS+SCFSAMPGR++HYD
Subjt:  ANPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD

A0A6J1IIZ6 uncharacterized protein LOC1114772968.4e-6889.19Show/hide
Query:  MAARVTKAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPP
        MAA+VTKAISGIE  A  TQH AQVIDVESVKCECCGLTEECTPAYIGRVRERY+G WICGLC+EAVKDESLRSQ NITTGEAVKRHMKFHK FKSS PP
Subjt:  MAARVTKAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPP

Query:  ANPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD
         NPTEDLISAMKQLLRRSLDSPK DASRSL RS+SCFSAMPGRRSHYD
Subjt:  ANPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD

A0A6J1J3W6 uncharacterized protein LOC1114810291.3e-6382.43Show/hide
Query:  MAARVTKAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPP
        MAA+VTK I+ IE   P TQH AQVIDVES+KCECCGLTEECTPAYI RVRERY+G WICGLC+EAVKDES+RSQ  ITTGEAVKRHMKFHK FKSS PP
Subjt:  MAARVTKAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPP

Query:  ANPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD
         NPTEDLISAMKQL RRSLDSPK DASRSL RS+SCFS+MP RRSHYD
Subjt:  ANPTEDLISAMKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G72510.1 Protein of unknown function (DUF1677)1.9e-3255.38Show/hide
Query:  ESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPPANPTEDLISAMKQLLRRSLDSP------
        +SV C+CCGLTEECT +YI  VRERY G WICGLCSEAVK E +R++  +TT EA+ RHM    +FKSS+PP NPT  LISAM+Q+LR+SLDSP      
Subjt:  ESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPPANPTEDLISAMKQLLRRSLDSP------

Query:  -----KND-------ASRSLSRSSSCFSAM
             K+D        S  LSRS SCF+++
Subjt:  -----KND-------ASRSLSRSSSCFSAM

AT1G72510.2 Protein of unknown function (DUF1677)1.9e-3255.38Show/hide
Query:  ESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPPANPTEDLISAMKQLLRRSLDSP------
        +SV C+CCGLTEECT +YI  VRERY G WICGLCSEAVK E +R++  +TT EA+ RHM    +FKSS+PP NPT  LISAM+Q+LR+SLDSP      
Subjt:  ESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPPANPTEDLISAMKQLLRRSLDSP------

Query:  -----KND-------ASRSLSRSSSCFSAM
             K+D        S  LSRS SCF+++
Subjt:  -----KND-------ASRSLSRSSSCFSAM

AT2G09970.1 Protein of unknown function (DUF1677)1.4e-2748.25Show/hide
Query:  PATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITT-GEAVKRHMKFHKQFKSSNPPANPTEDLISAMKQLL
        P TQ  +  +D  SV C+CCGLT+ECT +Y   +RERY G WI G CSEAVK + +R++  +TT  EA+ RHM    +FKSS+PP+N T  LISAM+Q+L
Subjt:  PATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITT-GEAVKRHMKFHKQFKSSNPPANPTEDLISAMKQLL

Query:  RRSLDSP-----------KND-------ASRSLSRSSSCFSAM
        R+SLDSP           K+D        S  LSRS SCF+++
Subjt:  RRSLDSP-----------KND-------ASRSLSRSSSCFSAM

AT3G22540.1 Protein of unknown function (DUF1677)8.4e-2043.24Show/hide
Query:  IDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPPANPTEDLISAMKQLL-RRSLDSPKN
        +++ESV+CECCGL E+CT  YI  V+  +D  W+CGLCSEAV+DE  R +   T  EAVK H+ F  +FK  NP  +    +   M+Q+L RRS +   +
Subjt:  IDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPPANPTEDLISAMKQLL-RRSLDSPKN

Query:  DASRSLSRSSS
          S+   RS++
Subjt:  DASRSLSRSSS

AT5G20670.1 Protein of unknown function (DUF1677)1.8e-2545Show/hide
Query:  TQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPPANPTEDLISAMKQLLRRS
        T+  + +  VESV C+ CG  EECTPAYI RV+ER+ G W+CGLC+EAVKDE +RS   I+  EA++RH  F  +F+S +P  +  ED IS + ++LRRS
Subjt:  TQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPPANPTEDLISAMKQLLRRS

Query:  LD-SPKN-----------------DASRSLSRSSSCFSAM
        LD SP+                  ++ RSL RS SCF ++
Subjt:  LD-SPKN-----------------DASRSLSRSSSCFSAM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCGAGGGTGACGAAGGCGATCTCCGGGATCGAGCCGCCGGCTCCGGCGACGCAGCACGGCGCTCAAGTCATCGACGTGGAGTCCGTGAAATGCGAGTGCTGTGG
ATTGACGGAGGAGTGCACTCCGGCGTACATCGGTCGTGTTCGGGAGAGGTACGACGGCAGTTGGATTTGCGGGCTCTGTTCGGAGGCGGTGAAGGACGAGTCTCTCAGAT
CTCAGGGGAACATCACCACCGGCGAAGCCGTGAAGAGGCACATGAAGTTCCACAAACAGTTCAAATCTTCGAATCCGCCGGCGAATCCTACTGAGGATTTGATTTCGGCA
ATGAAACAGCTTCTCCGGCGGTCGCTCGATTCTCCGAAGAACGACGCCTCGCGATCGCTAAGCCGTTCGAGTAGCTGTTTCTCCGCCATGCCAGGGCGGCGGAGCCATTA
CGAT
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCGAGGGTGACGAAGGCGATCTCCGGGATCGAGCCGCCGGCTCCGGCGACGCAGCACGGCGCTCAAGTCATCGACGTGGAGTCCGTGAAATGCGAGTGCTGTGG
ATTGACGGAGGAGTGCACTCCGGCGTACATCGGTCGTGTTCGGGAGAGGTACGACGGCAGTTGGATTTGCGGGCTCTGTTCGGAGGCGGTGAAGGACGAGTCTCTCAGAT
CTCAGGGGAACATCACCACCGGCGAAGCCGTGAAGAGGCACATGAAGTTCCACAAACAGTTCAAATCTTCGAATCCGCCGGCGAATCCTACTGAGGATTTGATTTCGGCA
ATGAAACAGCTTCTCCGGCGGTCGCTCGATTCTCCGAAGAACGACGCCTCGCGATCGCTAAGCCGTTCGAGTAGCTGTTTCTCCGCCATGCCAGGGCGGCGGAGCCATTA
CGAT
Protein sequenceShow/hide protein sequence
MAARVTKAISGIEPPAPATQHGAQVIDVESVKCECCGLTEECTPAYIGRVRERYDGSWICGLCSEAVKDESLRSQGNITTGEAVKRHMKFHKQFKSSNPPANPTEDLISA
MKQLLRRSLDSPKNDASRSLSRSSSCFSAMPGRRSHYD